Experiment: Adenine 0.74 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS06540 and A4249_RS06545 are separated by 108 nucleotides A4249_RS06545 and A4249_RS06550 are separated by 40 nucleotides A4249_RS06550 and A4249_RS06555 are separated by 15 nucleotides A4249_RS06555 and A4249_RS06560 overlap by 1 nucleotides
A4249_RS06540: A4249_RS06540 - S9 family peptidase, at 1,331,974 to 1,334,223
_RS06540
A4249_RS06545: A4249_RS06545 - ferredoxin--NADP reductase, at 1,334,332 to 1,335,147
_RS06545
A4249_RS06550: A4249_RS06550 - chorismate mutase, at 1,335,188 to 1,335,520
_RS06550
A4249_RS06555: A4249_RS06555 - Hpt domain-containing protein, at 1,335,536 to 1,335,889
_RS06555
A4249_RS06560: A4249_RS06560 - amino acid permease, at 1,335,889 to 1,337,301
_RS06560
Position (kb)
1334
1335
1336 Strain fitness (log2 ratio)
-1
0
1 at 1333.364 kb on + strand, within A4249_RS06540 at 1333.364 kb on + strand, within A4249_RS06540 at 1333.364 kb on + strand, within A4249_RS06540 at 1333.364 kb on + strand, within A4249_RS06540 at 1333.364 kb on + strand, within A4249_RS06540 at 1333.364 kb on + strand, within A4249_RS06540 at 1333.364 kb on + strand, within A4249_RS06540 at 1333.365 kb on - strand, within A4249_RS06540 at 1333.365 kb on - strand, within A4249_RS06540 at 1333.365 kb on - strand, within A4249_RS06540 at 1333.365 kb on - strand, within A4249_RS06540 at 1333.365 kb on - strand, within A4249_RS06540 at 1333.365 kb on - strand, within A4249_RS06540 at 1333.365 kb on - strand, within A4249_RS06540 at 1333.365 kb on - strand, within A4249_RS06540 at 1333.365 kb on - strand, within A4249_RS06540 at 1333.427 kb on + strand, within A4249_RS06540 at 1333.427 kb on + strand, within A4249_RS06540 at 1333.427 kb on + strand, within A4249_RS06540 at 1333.427 kb on + strand, within A4249_RS06540 at 1333.427 kb on + strand, within A4249_RS06540 at 1333.428 kb on - strand, within A4249_RS06540 at 1333.428 kb on - strand, within A4249_RS06540 at 1333.428 kb on - strand, within A4249_RS06540 at 1333.428 kb on - strand, within A4249_RS06540 at 1333.428 kb on - strand, within A4249_RS06540 at 1333.559 kb on + strand, within A4249_RS06540 at 1333.559 kb on + strand, within A4249_RS06540 at 1333.559 kb on + strand, within A4249_RS06540 at 1333.559 kb on + strand, within A4249_RS06540 at 1333.560 kb on - strand, within A4249_RS06540 at 1333.560 kb on - strand, within A4249_RS06540 at 1333.560 kb on - strand, within A4249_RS06540 at 1333.560 kb on - strand, within A4249_RS06540 at 1333.560 kb on - strand, within A4249_RS06540 at 1333.560 kb on - strand, within A4249_RS06540 at 1333.694 kb on + strand, within A4249_RS06540 at 1333.694 kb on + strand, within A4249_RS06540 at 1333.694 kb on + strand, within A4249_RS06540 at 1333.695 kb on - strand, within A4249_RS06540 at 1333.695 kb on - strand, within A4249_RS06540 at 1333.695 kb on - strand, within A4249_RS06540 at 1333.695 kb on - strand, within A4249_RS06540 at 1333.695 kb on - strand, within A4249_RS06540 at 1333.695 kb on - strand, within A4249_RS06540 at 1333.695 kb on - strand, within A4249_RS06540 at 1333.695 kb on - strand, within A4249_RS06540 at 1333.695 kb on - strand, within A4249_RS06540 at 1333.695 kb on - strand, within A4249_RS06540 at 1333.721 kb on + strand, within A4249_RS06540 at 1333.721 kb on + strand, within A4249_RS06540 at 1333.722 kb on - strand, within A4249_RS06540 at 1333.722 kb on - strand, within A4249_RS06540 at 1333.722 kb on - strand, within A4249_RS06540 at 1333.722 kb on - strand, within A4249_RS06540 at 1333.722 kb on - strand, within A4249_RS06540 at 1333.730 kb on + strand, within A4249_RS06540 at 1333.730 kb on + strand, within A4249_RS06540 at 1333.730 kb on + strand, within A4249_RS06540 at 1333.731 kb on - strand, within A4249_RS06540 at 1333.731 kb on - strand, within A4249_RS06540 at 1333.731 kb on - strand, within A4249_RS06540 at 1333.731 kb on - strand, within A4249_RS06540 at 1333.731 kb on - strand, within A4249_RS06540 at 1333.850 kb on + strand, within A4249_RS06540 at 1333.850 kb on + strand, within A4249_RS06540 at 1333.850 kb on + strand, within A4249_RS06540 at 1333.851 kb on - strand, within A4249_RS06540 at 1333.851 kb on - strand, within A4249_RS06540 at 1333.851 kb on - strand, within A4249_RS06540 at 1333.851 kb on - strand, within A4249_RS06540 at 1333.874 kb on + strand, within A4249_RS06540 at 1333.875 kb on - strand, within A4249_RS06540 at 1333.875 kb on - strand, within A4249_RS06540 at 1333.982 kb on + strand, within A4249_RS06540 at 1333.982 kb on + strand, within A4249_RS06540 at 1333.982 kb on + strand, within A4249_RS06540 at 1333.982 kb on + strand, within A4249_RS06540 at 1333.983 kb on - strand, within A4249_RS06540 at 1333.983 kb on - strand, within A4249_RS06540 at 1333.983 kb on - strand, within A4249_RS06540 at 1333.983 kb on - strand, within A4249_RS06540 at 1335.320 kb on + strand, within A4249_RS06550 at 1335.320 kb on + strand, within A4249_RS06550 at 1335.320 kb on + strand, within A4249_RS06550 at 1335.320 kb on + strand, within A4249_RS06550 at 1335.320 kb on + strand, within A4249_RS06550 at 1335.321 kb on - strand, within A4249_RS06550 at 1335.321 kb on - strand, within A4249_RS06550 at 1335.321 kb on - strand, within A4249_RS06550 at 1335.321 kb on - strand, within A4249_RS06550 at 1335.321 kb on - strand, within A4249_RS06550 at 1335.321 kb on - strand, within A4249_RS06550 at 1335.500 kb on + strand at 1335.501 kb on - strand at 1335.501 kb on - strand at 1335.537 kb on + strand at 1335.537 kb on + strand at 1335.537 kb on + strand at 1335.538 kb on - strand at 1335.538 kb on - strand at 1335.538 kb on - strand at 1335.573 kb on + strand, within A4249_RS06555 at 1335.721 kb on + strand, within A4249_RS06555 at 1335.721 kb on + strand, within A4249_RS06555 at 1335.722 kb on - strand, within A4249_RS06555 at 1335.722 kb on - strand, within A4249_RS06555 at 1335.722 kb on - strand, within A4249_RS06555 at 1335.722 kb on - strand, within A4249_RS06555 at 1335.722 kb on - strand, within A4249_RS06555 at 1335.722 kb on - strand, within A4249_RS06555 at 1335.722 kb on - strand, within A4249_RS06555 at 1335.947 kb on + strand at 1335.947 kb on + strand at 1335.947 kb on + strand at 1335.947 kb on + strand at 1335.947 kb on + strand at 1335.948 kb on - strand at 1335.948 kb on - strand at 1335.948 kb on - strand at 1335.948 kb on - strand at 1335.948 kb on - strand at 1335.948 kb on - strand at 1335.948 kb on - strand at 1335.948 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C) remove 1,333,364 + A4249_RS06540 0.62 +0.2 1,333,364 + A4249_RS06540 0.62 -0.9 1,333,364 + A4249_RS06540 0.62 -0.2 1,333,364 + A4249_RS06540 0.62 -0.9 1,333,364 + A4249_RS06540 0.62 -0.2 1,333,364 + A4249_RS06540 0.62 -0.5 1,333,364 + A4249_RS06540 0.62 +1.4 1,333,365 - A4249_RS06540 0.62 -0.4 1,333,365 - A4249_RS06540 0.62 +0.0 1,333,365 - A4249_RS06540 0.62 -0.1 1,333,365 - A4249_RS06540 0.62 -0.3 1,333,365 - A4249_RS06540 0.62 -0.8 1,333,365 - A4249_RS06540 0.62 +0.1 1,333,365 - A4249_RS06540 0.62 -0.5 1,333,365 - A4249_RS06540 0.62 +1.2 1,333,365 - A4249_RS06540 0.62 -0.0 1,333,427 + A4249_RS06540 0.65 +0.3 1,333,427 + A4249_RS06540 0.65 +0.1 1,333,427 + A4249_RS06540 0.65 -1.2 1,333,427 + A4249_RS06540 0.65 +0.2 1,333,427 + A4249_RS06540 0.65 +1.6 1,333,428 - A4249_RS06540 0.65 -0.7 1,333,428 - A4249_RS06540 0.65 -0.8 1,333,428 - A4249_RS06540 0.65 -0.2 1,333,428 - A4249_RS06540 0.65 -0.4 1,333,428 - A4249_RS06540 0.65 -0.1 1,333,559 + A4249_RS06540 0.70 +0.3 1,333,559 + A4249_RS06540 0.70 -0.1 1,333,559 + A4249_RS06540 0.70 -0.3 1,333,559 + A4249_RS06540 0.70 +0.3 1,333,560 - A4249_RS06540 0.70 +0.3 1,333,560 - A4249_RS06540 0.70 -0.3 1,333,560 - A4249_RS06540 0.70 -1.0 1,333,560 - A4249_RS06540 0.70 -0.6 1,333,560 - A4249_RS06540 0.70 -0.4 1,333,560 - A4249_RS06540 0.70 -0.5 1,333,694 + A4249_RS06540 0.76 -0.6 1,333,694 + A4249_RS06540 0.76 -0.9 1,333,694 + A4249_RS06540 0.76 -0.9 1,333,695 - A4249_RS06540 0.76 +0.8 1,333,695 - A4249_RS06540 0.76 -0.1 1,333,695 - A4249_RS06540 0.76 +0.2 1,333,695 - A4249_RS06540 0.76 -0.3 1,333,695 - A4249_RS06540 0.76 -0.3 1,333,695 - A4249_RS06540 0.76 -0.5 1,333,695 - A4249_RS06540 0.76 +0.2 1,333,695 - A4249_RS06540 0.76 +0.0 1,333,695 - A4249_RS06540 0.76 +1.3 1,333,695 - A4249_RS06540 0.76 -0.0 1,333,721 + A4249_RS06540 0.78 -1.1 1,333,721 + A4249_RS06540 0.78 +0.1 1,333,722 - A4249_RS06540 0.78 -0.3 1,333,722 - A4249_RS06540 0.78 -1.5 1,333,722 - A4249_RS06540 0.78 +0.2 1,333,722 - A4249_RS06540 0.78 -0.1 1,333,722 - A4249_RS06540 0.78 -0.3 1,333,730 + A4249_RS06540 0.78 +0.5 1,333,730 + A4249_RS06540 0.78 -0.5 1,333,730 + A4249_RS06540 0.78 -1.0 1,333,731 - A4249_RS06540 0.78 +0.5 1,333,731 - A4249_RS06540 0.78 -0.4 1,333,731 - A4249_RS06540 0.78 -0.3 1,333,731 - A4249_RS06540 0.78 +0.4 1,333,731 - A4249_RS06540 0.78 -0.3 1,333,850 + A4249_RS06540 0.83 -1.3 1,333,850 + A4249_RS06540 0.83 +0.3 1,333,850 + A4249_RS06540 0.83 -0.4 1,333,851 - A4249_RS06540 0.83 -0.3 1,333,851 - A4249_RS06540 0.83 -0.5 1,333,851 - A4249_RS06540 0.83 -0.8 1,333,851 - A4249_RS06540 0.83 +0.1 1,333,874 + A4249_RS06540 0.84 -0.3 1,333,875 - A4249_RS06540 0.84 +0.1 1,333,875 - A4249_RS06540 0.84 -0.6 1,333,982 + A4249_RS06540 0.89 -0.3 1,333,982 + A4249_RS06540 0.89 -1.1 1,333,982 + A4249_RS06540 0.89 -0.1 1,333,982 + A4249_RS06540 0.89 -0.8 1,333,983 - A4249_RS06540 0.89 -0.1 1,333,983 - A4249_RS06540 0.89 +0.5 1,333,983 - A4249_RS06540 0.89 -0.2 1,333,983 - A4249_RS06540 0.89 -0.6 1,335,320 + A4249_RS06550 0.40 -0.5 1,335,320 + A4249_RS06550 0.40 +0.2 1,335,320 + A4249_RS06550 0.40 -0.7 1,335,320 + A4249_RS06550 0.40 -0.4 1,335,320 + A4249_RS06550 0.40 +0.5 1,335,321 - A4249_RS06550 0.40 +0.9 1,335,321 - A4249_RS06550 0.40 -0.9 1,335,321 - A4249_RS06550 0.40 +0.2 1,335,321 - A4249_RS06550 0.40 -0.7 1,335,321 - A4249_RS06550 0.40 -1.1 1,335,321 - A4249_RS06550 0.40 -0.7 1,335,500 + -0.9 1,335,501 - -0.9 1,335,501 - -0.9 1,335,537 + -0.7 1,335,537 + -0.3 1,335,537 + +0.5 1,335,538 - +0.3 1,335,538 - +0.5 1,335,538 - +0.2 1,335,573 + A4249_RS06555 0.10 -0.2 1,335,721 + A4249_RS06555 0.52 -0.3 1,335,721 + A4249_RS06555 0.52 +0.7 1,335,722 - A4249_RS06555 0.53 -1.0 1,335,722 - A4249_RS06555 0.53 +0.3 1,335,722 - A4249_RS06555 0.53 -1.3 1,335,722 - A4249_RS06555 0.53 -1.6 1,335,722 - A4249_RS06555 0.53 +0.0 1,335,722 - A4249_RS06555 0.53 +0.7 1,335,722 - A4249_RS06555 0.53 +0.0 1,335,947 + -0.7 1,335,947 + -0.9 1,335,947 + +1.0 1,335,947 + +0.1 1,335,947 + +0.1 1,335,948 - +0.8 1,335,948 - +1.0 1,335,948 - +0.8 1,335,948 - -0.5 1,335,948 - +0.9 1,335,948 - +0.2 1,335,948 - +0.3 1,335,948 - +0.5
Or see this region's nucleotide sequence