Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS06420

Experiment: Adenine 0.74 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS06410 and A4249_RS06415 are separated by 56 nucleotidesA4249_RS06415 and A4249_RS06420 overlap by 31 nucleotidesA4249_RS06420 and A4249_RS06425 are separated by 205 nucleotides A4249_RS06410: A4249_RS06410 - NADH-quinone oxidoreductase subunit C, at 1,306,171 to 1,306,740 _RS06410 A4249_RS06415: A4249_RS06415 - NADH-quinone oxidoreductase subunit B, at 1,306,797 to 1,307,426 _RS06415 A4249_RS06420: A4249_RS06420 - NADH-quinone oxidoreductase subunit A, at 1,307,396 to 1,307,773 _RS06420 A4249_RS06425: A4249_RS06425 - AbgT family transporter, at 1,307,979 to 1,309,610 _RS06425 Position (kb) 1307 1308Strain fitness (log2 ratio) -1 0 1at 1307.398 kb on - strandat 1307.820 kb on - strandat 1307.897 kb on + strandat 1307.897 kb on + strandat 1307.897 kb on + strandat 1307.897 kb on + strandat 1307.898 kb on - strandat 1307.898 kb on - strandat 1307.898 kb on - strandat 1307.898 kb on - strandat 1307.898 kb on - strandat 1307.898 kb on - strandat 1307.898 kb on - strandat 1307.898 kb on - strandat 1307.898 kb on - strandat 1307.943 kb on - strandat 1307.943 kb on - strandat 1307.943 kb on - strandat 1307.986 kb on + strandat 1307.987 kb on - strandat 1308.023 kb on + strandat 1308.249 kb on + strand, within A4249_RS06425at 1308.249 kb on + strand, within A4249_RS06425at 1308.249 kb on + strand, within A4249_RS06425at 1308.250 kb on - strand, within A4249_RS06425at 1308.250 kb on - strand, within A4249_RS06425at 1308.250 kb on - strand, within A4249_RS06425at 1308.250 kb on - strand, within A4249_RS06425at 1308.250 kb on - strand, within A4249_RS06425at 1308.250 kb on - strand, within A4249_RS06425at 1308.250 kb on - strand, within A4249_RS06425at 1308.328 kb on + strand, within A4249_RS06425at 1308.328 kb on + strand, within A4249_RS06425at 1308.387 kb on + strand, within A4249_RS06425at 1308.387 kb on + strand, within A4249_RS06425at 1308.387 kb on + strand, within A4249_RS06425at 1308.387 kb on + strand, within A4249_RS06425at 1308.387 kb on + strand, within A4249_RS06425at 1308.387 kb on + strand, within A4249_RS06425at 1308.387 kb on + strand, within A4249_RS06425at 1308.387 kb on + strand, within A4249_RS06425at 1308.387 kb on + strand, within A4249_RS06425at 1308.387 kb on + strand, within A4249_RS06425at 1308.387 kb on + strand, within A4249_RS06425at 1308.387 kb on + strand, within A4249_RS06425at 1308.387 kb on + strand, within A4249_RS06425at 1308.387 kb on + strand, within A4249_RS06425at 1308.388 kb on - strand, within A4249_RS06425at 1308.388 kb on - strand, within A4249_RS06425at 1308.388 kb on - strand, within A4249_RS06425at 1308.388 kb on - strand, within A4249_RS06425at 1308.388 kb on - strand, within A4249_RS06425at 1308.388 kb on - strand, within A4249_RS06425at 1308.486 kb on + strand, within A4249_RS06425at 1308.570 kb on + strand, within A4249_RS06425at 1308.570 kb on + strand, within A4249_RS06425at 1308.632 kb on + strand, within A4249_RS06425at 1308.632 kb on + strand, within A4249_RS06425

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Per-strain Table

Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C)
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1,307,398 - +0.8
1,307,820 - +0.7
1,307,897 + -0.3
1,307,897 + -0.2
1,307,897 + -0.1
1,307,897 + +0.2
1,307,898 - -0.4
1,307,898 - -0.8
1,307,898 - +0.3
1,307,898 - +1.6
1,307,898 - -0.7
1,307,898 - -1.0
1,307,898 - +0.7
1,307,898 - +0.6
1,307,898 - +0.3
1,307,943 - -0.6
1,307,943 - -0.3
1,307,943 - -0.2
1,307,986 + -0.8
1,307,987 - +0.1
1,308,023 + +0.0
1,308,249 + A4249_RS06425 0.17 +0.1
1,308,249 + A4249_RS06425 0.17 -0.3
1,308,249 + A4249_RS06425 0.17 -0.1
1,308,250 - A4249_RS06425 0.17 -0.5
1,308,250 - A4249_RS06425 0.17 -0.8
1,308,250 - A4249_RS06425 0.17 +0.0
1,308,250 - A4249_RS06425 0.17 -0.5
1,308,250 - A4249_RS06425 0.17 +1.3
1,308,250 - A4249_RS06425 0.17 +0.0
1,308,250 - A4249_RS06425 0.17 +0.1
1,308,328 + A4249_RS06425 0.21 -0.1
1,308,328 + A4249_RS06425 0.21 -0.1
1,308,387 + A4249_RS06425 0.25 +0.9
1,308,387 + A4249_RS06425 0.25 -0.3
1,308,387 + A4249_RS06425 0.25 +0.7
1,308,387 + A4249_RS06425 0.25 +0.4
1,308,387 + A4249_RS06425 0.25 -0.0
1,308,387 + A4249_RS06425 0.25 +0.3
1,308,387 + A4249_RS06425 0.25 +0.8
1,308,387 + A4249_RS06425 0.25 -0.1
1,308,387 + A4249_RS06425 0.25 -0.1
1,308,387 + A4249_RS06425 0.25 +0.8
1,308,387 + A4249_RS06425 0.25 -0.9
1,308,387 + A4249_RS06425 0.25 -0.7
1,308,387 + A4249_RS06425 0.25 -1.7
1,308,387 + A4249_RS06425 0.25 -0.1
1,308,388 - A4249_RS06425 0.25 +0.1
1,308,388 - A4249_RS06425 0.25 -0.0
1,308,388 - A4249_RS06425 0.25 -0.3
1,308,388 - A4249_RS06425 0.25 +1.6
1,308,388 - A4249_RS06425 0.25 +0.3
1,308,388 - A4249_RS06425 0.25 -1.3
1,308,486 + A4249_RS06425 0.31 +0.5
1,308,570 + A4249_RS06425 0.36 -1.3
1,308,570 + A4249_RS06425 0.36 -0.2
1,308,632 + A4249_RS06425 0.40 +0.4
1,308,632 + A4249_RS06425 0.40 -1.3

Or see this region's nucleotide sequence