Experiment: Adenine 0.74 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS06405 and A4249_RS06410 are separated by 86 nucleotides A4249_RS06410 and A4249_RS06415 are separated by 56 nucleotides A4249_RS06415 and A4249_RS06420 overlap by 31 nucleotides A4249_RS06420 and A4249_RS06425 are separated by 205 nucleotides
A4249_RS06405: A4249_RS06405 - NADH-quinone oxidoreductase subunit D, at 1,304,906 to 1,306,084
_RS06405
A4249_RS06410: A4249_RS06410 - NADH-quinone oxidoreductase subunit C, at 1,306,171 to 1,306,740
_RS06410
A4249_RS06415: A4249_RS06415 - NADH-quinone oxidoreductase subunit B, at 1,306,797 to 1,307,426
_RS06415
A4249_RS06420: A4249_RS06420 - NADH-quinone oxidoreductase subunit A, at 1,307,396 to 1,307,773
_RS06420
A4249_RS06425: A4249_RS06425 - AbgT family transporter, at 1,307,979 to 1,309,610
_RS06425
Position (kb)
1306
1307
1308 Strain fitness (log2 ratio)
-1
0
1 at 1307.398 kb on - strand at 1307.820 kb on - strand at 1307.897 kb on + strand at 1307.897 kb on + strand at 1307.897 kb on + strand at 1307.897 kb on + strand at 1307.898 kb on - strand at 1307.898 kb on - strand at 1307.898 kb on - strand at 1307.898 kb on - strand at 1307.898 kb on - strand at 1307.898 kb on - strand at 1307.898 kb on - strand at 1307.898 kb on - strand at 1307.898 kb on - strand at 1307.943 kb on - strand at 1307.943 kb on - strand at 1307.943 kb on - strand at 1307.986 kb on + strand at 1307.987 kb on - strand at 1308.023 kb on + strand at 1308.249 kb on + strand, within A4249_RS06425 at 1308.249 kb on + strand, within A4249_RS06425 at 1308.249 kb on + strand, within A4249_RS06425 at 1308.250 kb on - strand, within A4249_RS06425 at 1308.250 kb on - strand, within A4249_RS06425 at 1308.250 kb on - strand, within A4249_RS06425 at 1308.250 kb on - strand, within A4249_RS06425 at 1308.250 kb on - strand, within A4249_RS06425 at 1308.250 kb on - strand, within A4249_RS06425 at 1308.250 kb on - strand, within A4249_RS06425 at 1308.328 kb on + strand, within A4249_RS06425 at 1308.328 kb on + strand, within A4249_RS06425 at 1308.387 kb on + strand, within A4249_RS06425 at 1308.387 kb on + strand, within A4249_RS06425 at 1308.387 kb on + strand, within A4249_RS06425 at 1308.387 kb on + strand, within A4249_RS06425 at 1308.387 kb on + strand, within A4249_RS06425 at 1308.387 kb on + strand, within A4249_RS06425 at 1308.387 kb on + strand, within A4249_RS06425 at 1308.387 kb on + strand, within A4249_RS06425 at 1308.387 kb on + strand, within A4249_RS06425 at 1308.387 kb on + strand, within A4249_RS06425 at 1308.387 kb on + strand, within A4249_RS06425 at 1308.387 kb on + strand, within A4249_RS06425 at 1308.387 kb on + strand, within A4249_RS06425 at 1308.387 kb on + strand, within A4249_RS06425 at 1308.388 kb on - strand, within A4249_RS06425 at 1308.388 kb on - strand, within A4249_RS06425 at 1308.388 kb on - strand, within A4249_RS06425 at 1308.388 kb on - strand, within A4249_RS06425 at 1308.388 kb on - strand, within A4249_RS06425 at 1308.388 kb on - strand, within A4249_RS06425
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C) remove 1,307,398 - +0.8 1,307,820 - +0.7 1,307,897 + -0.3 1,307,897 + -0.2 1,307,897 + -0.1 1,307,897 + +0.2 1,307,898 - -0.4 1,307,898 - -0.8 1,307,898 - +0.3 1,307,898 - +1.6 1,307,898 - -0.7 1,307,898 - -1.0 1,307,898 - +0.7 1,307,898 - +0.6 1,307,898 - +0.3 1,307,943 - -0.6 1,307,943 - -0.3 1,307,943 - -0.2 1,307,986 + -0.8 1,307,987 - +0.1 1,308,023 + +0.0 1,308,249 + A4249_RS06425 0.17 +0.1 1,308,249 + A4249_RS06425 0.17 -0.3 1,308,249 + A4249_RS06425 0.17 -0.1 1,308,250 - A4249_RS06425 0.17 -0.5 1,308,250 - A4249_RS06425 0.17 -0.8 1,308,250 - A4249_RS06425 0.17 +0.0 1,308,250 - A4249_RS06425 0.17 -0.5 1,308,250 - A4249_RS06425 0.17 +1.3 1,308,250 - A4249_RS06425 0.17 +0.0 1,308,250 - A4249_RS06425 0.17 +0.1 1,308,328 + A4249_RS06425 0.21 -0.1 1,308,328 + A4249_RS06425 0.21 -0.1 1,308,387 + A4249_RS06425 0.25 +0.9 1,308,387 + A4249_RS06425 0.25 -0.3 1,308,387 + A4249_RS06425 0.25 +0.7 1,308,387 + A4249_RS06425 0.25 +0.4 1,308,387 + A4249_RS06425 0.25 -0.0 1,308,387 + A4249_RS06425 0.25 +0.3 1,308,387 + A4249_RS06425 0.25 +0.8 1,308,387 + A4249_RS06425 0.25 -0.1 1,308,387 + A4249_RS06425 0.25 -0.1 1,308,387 + A4249_RS06425 0.25 +0.8 1,308,387 + A4249_RS06425 0.25 -0.9 1,308,387 + A4249_RS06425 0.25 -0.7 1,308,387 + A4249_RS06425 0.25 -1.7 1,308,387 + A4249_RS06425 0.25 -0.1 1,308,388 - A4249_RS06425 0.25 +0.1 1,308,388 - A4249_RS06425 0.25 -0.0 1,308,388 - A4249_RS06425 0.25 -0.3 1,308,388 - A4249_RS06425 0.25 +1.6 1,308,388 - A4249_RS06425 0.25 +0.3 1,308,388 - A4249_RS06425 0.25 -1.3
Or see this region's nucleotide sequence