Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS06270

Experiment: Adenine 0.74 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS06260 and A4249_RS06265 are separated by 39 nucleotidesA4249_RS06265 and A4249_RS06270 are separated by 127 nucleotidesA4249_RS06270 and A4249_RS06275 are separated by 111 nucleotides A4249_RS06260: A4249_RS06260 - ribosome recycling factor, at 1,275,472 to 1,276,029 _RS06260 A4249_RS06265: A4249_RS06265 - UMP kinase, at 1,276,069 to 1,276,803 _RS06265 A4249_RS06270: A4249_RS06270 - translation elongation factor Ts, at 1,276,931 to 1,277,872 _RS06270 A4249_RS06275: A4249_RS06275 - 30S ribosomal protein S2, at 1,277,984 to 1,278,847 _RS06275 Position (kb) 1276 1277 1278Strain fitness (log2 ratio) -1 0 1at 1276.851 kb on + strandat 1276.852 kb on - strandat 1276.852 kb on - strandat 1276.852 kb on - strandat 1276.852 kb on - strandat 1276.852 kb on - strandat 1276.852 kb on - strandat 1276.854 kb on - strandat 1276.854 kb on - strandat 1276.854 kb on - strandat 1276.854 kb on - strandat 1276.900 kb on - strandat 1277.897 kb on - strandat 1277.897 kb on - strandat 1277.897 kb on - strandat 1277.921 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C)
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1,276,851 + -0.1
1,276,852 - -0.2
1,276,852 - +0.3
1,276,852 - -0.5
1,276,852 - +0.6
1,276,852 - +0.7
1,276,852 - +0.3
1,276,854 - -0.4
1,276,854 - +0.7
1,276,854 - +1.2
1,276,854 - +0.6
1,276,900 - -0.1
1,277,897 - -0.4
1,277,897 - -0.2
1,277,897 - -0.5
1,277,921 - -0.4

Or see this region's nucleotide sequence