Experiment: Adenine 0.74 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS05290 and A4249_RS05295 are separated by 58 nucleotides A4249_RS05295 and A4249_RS05300 are separated by 91 nucleotides A4249_RS05300 and A4249_RS05305 are separated by 317 nucleotides
A4249_RS05290: A4249_RS05290 - Crp/Fnr family transcriptional regulator, at 1,087,269 to 1,088,027
_RS05290
A4249_RS05295: A4249_RS05295 - Crp/Fnr family transcriptional regulator, at 1,088,086 to 1,088,841
_RS05295
A4249_RS05300: A4249_RS05300 - hypothetical protein, at 1,088,933 to 1,089,181
_RS05300
A4249_RS05305: A4249_RS05305 - glycosyltransferase, at 1,089,499 to 1,090,605
_RS05305
Position (kb)
1088
1089
1090 Strain fitness (log2 ratio)
-2
-1
0
1 at 1087.992 kb on + strand at 1087.992 kb on + strand at 1087.992 kb on + strand at 1087.992 kb on + strand at 1087.992 kb on + strand at 1087.993 kb on - strand at 1087.993 kb on - strand at 1087.993 kb on - strand at 1087.993 kb on - strand at 1087.993 kb on - strand at 1087.993 kb on - strand at 1087.993 kb on - strand at 1087.993 kb on - strand at 1087.993 kb on - strand at 1088.068 kb on - strand at 1088.081 kb on + strand at 1088.087 kb on + strand at 1088.087 kb on + strand at 1088.087 kb on + strand at 1088.088 kb on - strand at 1088.088 kb on - strand at 1088.088 kb on - strand at 1088.088 kb on - strand at 1088.130 kb on + strand at 1088.130 kb on + strand at 1088.130 kb on + strand at 1088.130 kb on + strand at 1088.130 kb on + strand at 1088.130 kb on + strand at 1088.130 kb on + strand at 1088.130 kb on + strand at 1088.131 kb on - strand at 1088.131 kb on - strand at 1088.131 kb on - strand at 1088.150 kb on + strand at 1088.150 kb on + strand at 1088.150 kb on + strand at 1088.150 kb on + strand at 1088.151 kb on - strand at 1088.151 kb on - strand at 1088.151 kb on - strand at 1088.347 kb on + strand, within A4249_RS05295 at 1088.366 kb on + strand, within A4249_RS05295 at 1088.367 kb on - strand, within A4249_RS05295 at 1088.367 kb on - strand, within A4249_RS05295 at 1088.367 kb on - strand, within A4249_RS05295 at 1088.367 kb on - strand, within A4249_RS05295 at 1088.367 kb on - strand, within A4249_RS05295 at 1088.452 kb on + strand, within A4249_RS05295 at 1088.452 kb on + strand, within A4249_RS05295 at 1088.452 kb on + strand, within A4249_RS05295 at 1088.453 kb on - strand, within A4249_RS05295 at 1088.453 kb on - strand, within A4249_RS05295 at 1088.453 kb on - strand, within A4249_RS05295 at 1088.453 kb on - strand, within A4249_RS05295 at 1088.557 kb on + strand, within A4249_RS05295 at 1088.558 kb on - strand, within A4249_RS05295 at 1088.622 kb on + strand, within A4249_RS05295 at 1088.622 kb on + strand, within A4249_RS05295 at 1088.694 kb on + strand, within A4249_RS05295 at 1088.694 kb on + strand, within A4249_RS05295 at 1088.695 kb on - strand, within A4249_RS05295 at 1088.695 kb on - strand, within A4249_RS05295 at 1088.761 kb on + strand, within A4249_RS05295 at 1088.761 kb on + strand, within A4249_RS05295 at 1088.761 kb on + strand, within A4249_RS05295 at 1088.761 kb on + strand, within A4249_RS05295 at 1088.761 kb on + strand, within A4249_RS05295 at 1088.761 kb on + strand, within A4249_RS05295 at 1088.761 kb on + strand, within A4249_RS05295 at 1088.762 kb on - strand, within A4249_RS05295 at 1088.762 kb on - strand, within A4249_RS05295 at 1088.762 kb on - strand, within A4249_RS05295 at 1088.762 kb on - strand, within A4249_RS05295 at 1088.762 kb on - strand, within A4249_RS05295 at 1088.762 kb on - strand, within A4249_RS05295 at 1088.762 kb on - strand, within A4249_RS05295 at 1088.762 kb on - strand, within A4249_RS05295 at 1088.762 kb on - strand, within A4249_RS05295 at 1088.907 kb on + strand at 1088.907 kb on + strand at 1088.973 kb on - strand, within A4249_RS05300 at 1089.196 kb on + strand at 1089.196 kb on + strand at 1089.196 kb on + strand at 1089.196 kb on + strand at 1089.196 kb on + strand at 1089.196 kb on + strand at 1089.196 kb on + strand at 1089.197 kb on - strand at 1089.197 kb on - strand at 1089.197 kb on - strand at 1089.246 kb on + strand at 1089.246 kb on + strand at 1089.246 kb on + strand at 1089.246 kb on + strand at 1089.247 kb on - strand at 1089.247 kb on - strand at 1089.247 kb on - strand at 1089.247 kb on - strand at 1089.247 kb on - strand at 1089.247 kb on - strand at 1089.271 kb on + strand at 1089.272 kb on - strand at 1089.272 kb on - strand at 1089.272 kb on - strand at 1089.276 kb on + strand at 1089.416 kb on + strand at 1089.416 kb on + strand at 1089.417 kb on - strand at 1089.417 kb on - strand at 1089.427 kb on + strand at 1089.427 kb on + strand at 1089.427 kb on + strand at 1089.427 kb on + strand at 1089.427 kb on + strand at 1089.428 kb on - strand at 1089.448 kb on - strand at 1089.448 kb on - strand at 1089.448 kb on - strand at 1089.529 kb on + strand at 1089.529 kb on + strand at 1089.530 kb on - strand at 1089.530 kb on - strand at 1089.570 kb on + strand at 1089.570 kb on + strand at 1089.570 kb on + strand at 1089.570 kb on + strand at 1089.571 kb on - strand at 1089.571 kb on - strand at 1089.742 kb on + strand, within A4249_RS05305 at 1089.742 kb on + strand, within A4249_RS05305 at 1089.742 kb on + strand, within A4249_RS05305 at 1089.742 kb on + strand, within A4249_RS05305 at 1089.743 kb on - strand, within A4249_RS05305 at 1089.743 kb on - strand, within A4249_RS05305 at 1089.788 kb on + strand, within A4249_RS05305 at 1089.788 kb on + strand, within A4249_RS05305 at 1089.788 kb on + strand, within A4249_RS05305 at 1089.788 kb on + strand, within A4249_RS05305 at 1089.788 kb on + strand, within A4249_RS05305 at 1089.788 kb on + strand, within A4249_RS05305 at 1089.789 kb on - strand, within A4249_RS05305 at 1089.789 kb on - strand, within A4249_RS05305 at 1089.789 kb on - strand, within A4249_RS05305 at 1089.789 kb on - strand, within A4249_RS05305 at 1089.789 kb on - strand, within A4249_RS05305 at 1089.789 kb on - strand, within A4249_RS05305 at 1089.789 kb on - strand, within A4249_RS05305 at 1089.789 kb on - strand, within A4249_RS05305 at 1089.808 kb on + strand, within A4249_RS05305 at 1089.808 kb on + strand, within A4249_RS05305 at 1089.808 kb on + strand, within A4249_RS05305 at 1089.808 kb on + strand, within A4249_RS05305 at 1089.808 kb on + strand, within A4249_RS05305 at 1089.809 kb on - strand, within A4249_RS05305 at 1089.809 kb on - strand, within A4249_RS05305 at 1089.809 kb on - strand, within A4249_RS05305 at 1089.809 kb on - strand, within A4249_RS05305 at 1090.060 kb on + strand, within A4249_RS05305 at 1090.146 kb on + strand, within A4249_RS05305 at 1090.146 kb on + strand, within A4249_RS05305 at 1090.151 kb on + strand, within A4249_RS05305 at 1090.162 kb on + strand, within A4249_RS05305 at 1090.162 kb on + strand, within A4249_RS05305 at 1090.163 kb on - strand, within A4249_RS05305 at 1090.163 kb on - strand, within A4249_RS05305 at 1090.163 kb on - strand, within A4249_RS05305
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C) remove 1,087,992 + -0.1 1,087,992 + +0.9 1,087,992 + +0.2 1,087,992 + +0.6 1,087,992 + -0.7 1,087,993 - -0.5 1,087,993 - -0.1 1,087,993 - -0.1 1,087,993 - +0.8 1,087,993 - -0.3 1,087,993 - +0.7 1,087,993 - -0.2 1,087,993 - -0.5 1,087,993 - +1.1 1,088,068 - -0.8 1,088,081 + -0.9 1,088,087 + -0.5 1,088,087 + +0.7 1,088,087 + +0.2 1,088,088 - +0.8 1,088,088 - -0.3 1,088,088 - -0.3 1,088,088 - +0.6 1,088,130 + -0.1 1,088,130 + -0.2 1,088,130 + -0.8 1,088,130 + -0.0 1,088,130 + +1.0 1,088,130 + -0.3 1,088,130 + -1.3 1,088,130 + +0.7 1,088,131 - -0.1 1,088,131 - -0.5 1,088,131 - -0.4 1,088,150 + -0.4 1,088,150 + -0.9 1,088,150 + -0.2 1,088,150 + -0.2 1,088,151 - +0.3 1,088,151 - -0.2 1,088,151 - +0.6 1,088,347 + A4249_RS05295 0.35 +0.1 1,088,366 + A4249_RS05295 0.37 -1.5 1,088,367 - A4249_RS05295 0.37 +0.5 1,088,367 - A4249_RS05295 0.37 +0.6 1,088,367 - A4249_RS05295 0.37 +0.3 1,088,367 - A4249_RS05295 0.37 +0.5 1,088,367 - A4249_RS05295 0.37 +0.9 1,088,452 + A4249_RS05295 0.48 -1.2 1,088,452 + A4249_RS05295 0.48 +0.2 1,088,452 + A4249_RS05295 0.48 +0.2 1,088,453 - A4249_RS05295 0.49 +0.5 1,088,453 - A4249_RS05295 0.49 -0.5 1,088,453 - A4249_RS05295 0.49 +0.1 1,088,453 - A4249_RS05295 0.49 -0.2 1,088,557 + A4249_RS05295 0.62 +0.4 1,088,558 - A4249_RS05295 0.62 +0.5 1,088,622 + A4249_RS05295 0.71 +0.3 1,088,622 + A4249_RS05295 0.71 -0.2 1,088,694 + A4249_RS05295 0.80 -1.0 1,088,694 + A4249_RS05295 0.80 -1.7 1,088,695 - A4249_RS05295 0.81 +0.9 1,088,695 - A4249_RS05295 0.81 -0.3 1,088,761 + A4249_RS05295 0.89 -0.2 1,088,761 + A4249_RS05295 0.89 +0.8 1,088,761 + A4249_RS05295 0.89 +0.4 1,088,761 + A4249_RS05295 0.89 +0.9 1,088,761 + A4249_RS05295 0.89 +0.0 1,088,761 + A4249_RS05295 0.89 -0.8 1,088,761 + A4249_RS05295 0.89 -1.9 1,088,762 - A4249_RS05295 0.89 +0.2 1,088,762 - A4249_RS05295 0.89 +0.6 1,088,762 - A4249_RS05295 0.89 +0.8 1,088,762 - A4249_RS05295 0.89 +0.6 1,088,762 - A4249_RS05295 0.89 -0.5 1,088,762 - A4249_RS05295 0.89 -1.2 1,088,762 - A4249_RS05295 0.89 +0.4 1,088,762 - A4249_RS05295 0.89 -0.2 1,088,762 - A4249_RS05295 0.89 -0.9 1,088,907 + -0.0 1,088,907 + +0.5 1,088,973 - A4249_RS05300 0.16 -0.4 1,089,196 + -1.2 1,089,196 + +0.1 1,089,196 + +0.2 1,089,196 + +0.5 1,089,196 + -0.2 1,089,196 + -0.3 1,089,196 + +0.9 1,089,197 - +1.1 1,089,197 - +0.0 1,089,197 - +0.2 1,089,246 + -0.7 1,089,246 + +0.5 1,089,246 + -0.1 1,089,246 + +0.1 1,089,247 - -0.2 1,089,247 - -0.1 1,089,247 - +1.3 1,089,247 - +0.1 1,089,247 - +0.1 1,089,247 - +1.7 1,089,271 + -0.9 1,089,272 - -1.5 1,089,272 - -0.3 1,089,272 - -1.3 1,089,276 + +0.7 1,089,416 + +0.4 1,089,416 + -0.6 1,089,417 - -0.6 1,089,417 - +0.3 1,089,427 + +0.5 1,089,427 + +0.2 1,089,427 + -0.1 1,089,427 + +0.4 1,089,427 + -0.8 1,089,428 - -0.3 1,089,448 - +0.6 1,089,448 - -0.4 1,089,448 - +1.0 1,089,529 + +0.3 1,089,529 + -0.2 1,089,530 - +0.8 1,089,530 - +0.0 1,089,570 + -2.3 1,089,570 + -0.9 1,089,570 + +0.4 1,089,570 + +0.5 1,089,571 - -0.7 1,089,571 - +0.8 1,089,742 + A4249_RS05305 0.22 +1.1 1,089,742 + A4249_RS05305 0.22 -0.6 1,089,742 + A4249_RS05305 0.22 -0.8 1,089,742 + A4249_RS05305 0.22 -0.5 1,089,743 - A4249_RS05305 0.22 +0.4 1,089,743 - A4249_RS05305 0.22 +0.5 1,089,788 + A4249_RS05305 0.26 +0.0 1,089,788 + A4249_RS05305 0.26 -0.2 1,089,788 + A4249_RS05305 0.26 +0.2 1,089,788 + A4249_RS05305 0.26 -1.6 1,089,788 + A4249_RS05305 0.26 +0.2 1,089,788 + A4249_RS05305 0.26 -0.4 1,089,789 - A4249_RS05305 0.26 +1.1 1,089,789 - A4249_RS05305 0.26 -0.8 1,089,789 - A4249_RS05305 0.26 +0.3 1,089,789 - A4249_RS05305 0.26 +0.2 1,089,789 - A4249_RS05305 0.26 -0.6 1,089,789 - A4249_RS05305 0.26 -0.6 1,089,789 - A4249_RS05305 0.26 -2.1 1,089,789 - A4249_RS05305 0.26 +0.1 1,089,808 + A4249_RS05305 0.28 -0.6 1,089,808 + A4249_RS05305 0.28 -0.0 1,089,808 + A4249_RS05305 0.28 -0.4 1,089,808 + A4249_RS05305 0.28 -0.4 1,089,808 + A4249_RS05305 0.28 +0.4 1,089,809 - A4249_RS05305 0.28 +1.2 1,089,809 - A4249_RS05305 0.28 -1.9 1,089,809 - A4249_RS05305 0.28 +0.2 1,089,809 - A4249_RS05305 0.28 +0.4 1,090,060 + A4249_RS05305 0.51 -0.3 1,090,146 + A4249_RS05305 0.58 +0.3 1,090,146 + A4249_RS05305 0.58 +0.4 1,090,151 + A4249_RS05305 0.59 +0.3 1,090,162 + A4249_RS05305 0.60 +0.5 1,090,162 + A4249_RS05305 0.60 +0.3 1,090,163 - A4249_RS05305 0.60 +0.1 1,090,163 - A4249_RS05305 0.60 -0.8 1,090,163 - A4249_RS05305 0.60 +0.2
Or see this region's nucleotide sequence