Experiment: Adenine 0.74 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS04510 and A4249_RS04515 are separated by 114 nucleotides A4249_RS04515 and A4249_RS04520 overlap by 1 nucleotides A4249_RS04520 and A4249_RS04525 are separated by 328 nucleotides A4249_RS04525 and A4249_RS04530 are separated by 101 nucleotides
A4249_RS04510: A4249_RS04510 - polymer-forming cytoskeletal protein, at 938,158 to 938,703
_RS04510
A4249_RS04515: A4249_RS04515 - peroxiredoxin, at 938,818 to 939,282
_RS04515
A4249_RS04520: A4249_RS04520 - tyrosine--tRNA ligase, at 939,282 to 940,535
_RS04520
A4249_RS04525: A4249_RS04525 - DUF4287 domain-containing protein, at 940,864 to 941,079
_RS04525
A4249_RS04530: A4249_RS04530 - DOMON-like domain-containing protein, at 941,181 to 941,690
_RS04530
Position (kb) 939
940
941 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 938.504 kb on + strand, within A4249_RS04510 at 938.504 kb on + strand, within A4249_RS04510 at 938.504 kb on + strand, within A4249_RS04510 at 938.505 kb on - strand, within A4249_RS04510 at 938.505 kb on - strand, within A4249_RS04510 at 938.682 kb on - strand at 938.682 kb on - strand at 938.744 kb on + strand at 938.745 kb on - strand at 938.745 kb on - strand at 938.747 kb on + strand at 938.747 kb on + strand at 938.747 kb on + strand at 938.748 kb on - strand at 938.763 kb on + strand at 938.763 kb on + strand at 938.763 kb on + strand at 938.764 kb on - strand at 938.939 kb on + strand, within A4249_RS04515 at 938.939 kb on + strand, within A4249_RS04515 at 938.939 kb on + strand, within A4249_RS04515 at 938.939 kb on + strand, within A4249_RS04515 at 938.939 kb on + strand, within A4249_RS04515 at 938.940 kb on - strand, within A4249_RS04515 at 938.940 kb on - strand, within A4249_RS04515 at 938.940 kb on - strand, within A4249_RS04515 at 938.940 kb on - strand, within A4249_RS04515 at 938.940 kb on - strand, within A4249_RS04515 at 938.940 kb on - strand, within A4249_RS04515 at 938.940 kb on - strand, within A4249_RS04515 at 938.940 kb on - strand, within A4249_RS04515 at 938.951 kb on + strand, within A4249_RS04515 at 938.952 kb on - strand, within A4249_RS04515 at 938.952 kb on - strand, within A4249_RS04515 at 939.032 kb on + strand, within A4249_RS04515 at 939.032 kb on + strand, within A4249_RS04515 at 939.032 kb on + strand, within A4249_RS04515 at 939.032 kb on + strand, within A4249_RS04515 at 939.033 kb on - strand, within A4249_RS04515 at 939.033 kb on - strand, within A4249_RS04515 at 939.033 kb on - strand, within A4249_RS04515 at 939.033 kb on - strand, within A4249_RS04515 at 939.082 kb on + strand, within A4249_RS04515 at 939.082 kb on + strand, within A4249_RS04515 at 939.082 kb on + strand, within A4249_RS04515 at 939.083 kb on - strand, within A4249_RS04515 at 939.083 kb on - strand, within A4249_RS04515 at 939.083 kb on - strand, within A4249_RS04515 at 939.083 kb on - strand, within A4249_RS04515 at 939.083 kb on - strand, within A4249_RS04515 at 939.083 kb on - strand, within A4249_RS04515 at 939.173 kb on + strand, within A4249_RS04515 at 939.174 kb on - strand, within A4249_RS04515 at 939.174 kb on - strand, within A4249_RS04515 at 939.179 kb on + strand, within A4249_RS04515 at 939.179 kb on + strand, within A4249_RS04515 at 939.179 kb on + strand, within A4249_RS04515 at 939.179 kb on + strand, within A4249_RS04515 at 939.179 kb on + strand, within A4249_RS04515 at 939.179 kb on + strand, within A4249_RS04515 at 939.179 kb on + strand, within A4249_RS04515 at 939.180 kb on - strand, within A4249_RS04515 at 939.180 kb on - strand, within A4249_RS04515 at 939.180 kb on - strand, within A4249_RS04515 at 940.549 kb on + strand at 940.550 kb on - strand at 940.550 kb on - strand at 940.628 kb on + strand at 940.628 kb on + strand at 940.628 kb on + strand at 940.629 kb on - strand at 940.629 kb on - strand at 940.629 kb on - strand at 940.629 kb on - strand at 940.638 kb on - strand at 940.749 kb on + strand at 940.749 kb on + strand at 940.749 kb on + strand at 940.749 kb on + strand at 940.749 kb on + strand at 940.750 kb on - strand at 940.750 kb on - strand at 940.750 kb on - strand at 940.750 kb on - strand at 940.750 kb on - strand at 940.750 kb on - strand at 940.750 kb on - strand at 940.750 kb on - strand at 940.750 kb on - strand at 940.775 kb on + strand at 940.817 kb on - strand at 940.818 kb on + strand at 940.818 kb on + strand at 940.818 kb on + strand at 940.818 kb on + strand at 940.818 kb on + strand at 940.819 kb on - strand at 940.819 kb on - strand at 940.819 kb on - strand at 940.819 kb on - strand at 940.819 kb on - strand at 940.831 kb on + strand at 940.832 kb on - strand at 940.834 kb on + strand at 940.840 kb on + strand at 940.840 kb on + strand at 940.841 kb on - strand at 940.841 kb on - strand at 940.866 kb on - strand at 940.893 kb on - strand, within A4249_RS04525 at 940.893 kb on - strand, within A4249_RS04525 at 940.893 kb on - strand, within A4249_RS04525 at 941.010 kb on + strand, within A4249_RS04525 at 941.010 kb on + strand, within A4249_RS04525 at 941.010 kb on + strand, within A4249_RS04525 at 941.010 kb on + strand, within A4249_RS04525 at 941.010 kb on + strand, within A4249_RS04525 at 941.010 kb on + strand, within A4249_RS04525 at 941.010 kb on + strand, within A4249_RS04525 at 941.011 kb on - strand, within A4249_RS04525 at 941.011 kb on - strand, within A4249_RS04525 at 941.011 kb on - strand, within A4249_RS04525 at 941.011 kb on - strand, within A4249_RS04525 at 941.011 kb on - strand, within A4249_RS04525 at 941.021 kb on + strand, within A4249_RS04525 at 941.022 kb on - strand, within A4249_RS04525 at 941.045 kb on + strand, within A4249_RS04525 at 941.045 kb on + strand, within A4249_RS04525 at 941.045 kb on + strand, within A4249_RS04525 at 941.045 kb on + strand, within A4249_RS04525 at 941.045 kb on + strand, within A4249_RS04525 at 941.045 kb on + strand, within A4249_RS04525 at 941.045 kb on + strand, within A4249_RS04525 at 941.045 kb on + strand, within A4249_RS04525 at 941.045 kb on + strand, within A4249_RS04525 at 941.046 kb on - strand, within A4249_RS04525 at 941.046 kb on - strand, within A4249_RS04525 at 941.046 kb on - strand, within A4249_RS04525 at 941.046 kb on - strand, within A4249_RS04525 at 941.104 kb on + strand at 941.104 kb on + strand at 941.105 kb on - strand at 941.107 kb on + strand at 941.107 kb on + strand at 941.107 kb on + strand at 941.107 kb on + strand at 941.107 kb on + strand at 941.169 kb on + strand at 941.180 kb on + strand at 941.180 kb on + strand at 941.180 kb on + strand at 941.180 kb on + strand at 941.180 kb on + strand at 941.180 kb on + strand at 941.181 kb on - strand at 941.181 kb on - strand at 941.181 kb on - strand at 941.181 kb on - strand at 941.181 kb on - strand at 941.277 kb on + strand, within A4249_RS04530 at 941.277 kb on + strand, within A4249_RS04530 at 941.277 kb on + strand, within A4249_RS04530 at 941.277 kb on + strand, within A4249_RS04530 at 941.277 kb on + strand, within A4249_RS04530 at 941.277 kb on + strand, within A4249_RS04530 at 941.277 kb on + strand, within A4249_RS04530 at 941.277 kb on + strand, within A4249_RS04530 at 941.277 kb on + strand, within A4249_RS04530 at 941.277 kb on + strand, within A4249_RS04530 at 941.277 kb on + strand, within A4249_RS04530 at 941.277 kb on + strand, within A4249_RS04530 at 941.277 kb on + strand, within A4249_RS04530 at 941.277 kb on + strand, within A4249_RS04530 at 941.277 kb on + strand, within A4249_RS04530 at 941.277 kb on + strand, within A4249_RS04530 at 941.277 kb on + strand, within A4249_RS04530 at 941.277 kb on + strand, within A4249_RS04530 at 941.278 kb on - strand, within A4249_RS04530 at 941.278 kb on - strand, within A4249_RS04530 at 941.278 kb on - strand, within A4249_RS04530 at 941.278 kb on - strand, within A4249_RS04530 at 941.278 kb on - strand, within A4249_RS04530 at 941.278 kb on - strand, within A4249_RS04530 at 941.278 kb on - strand, within A4249_RS04530 at 941.278 kb on - strand, within A4249_RS04530 at 941.279 kb on + strand, within A4249_RS04530 at 941.279 kb on + strand, within A4249_RS04530 at 941.279 kb on + strand, within A4249_RS04530 at 941.279 kb on + strand, within A4249_RS04530 at 941.279 kb on + strand, within A4249_RS04530 at 941.279 kb on + strand, within A4249_RS04530 at 941.279 kb on + strand, within A4249_RS04530 at 941.279 kb on + strand, within A4249_RS04530 at 941.279 kb on + strand, within A4249_RS04530 at 941.279 kb on + strand, within A4249_RS04530 at 941.279 kb on + strand, within A4249_RS04530 at 941.279 kb on + strand, within A4249_RS04530 at 941.279 kb on + strand, within A4249_RS04530 at 941.279 kb on + strand, within A4249_RS04530 at 941.280 kb on - strand, within A4249_RS04530 at 941.280 kb on - strand, within A4249_RS04530 at 941.280 kb on - strand, within A4249_RS04530 at 941.280 kb on - strand, within A4249_RS04530 at 941.280 kb on - strand, within A4249_RS04530 at 941.280 kb on - strand, within A4249_RS04530 at 941.280 kb on - strand, within A4249_RS04530 at 941.280 kb on - strand, within A4249_RS04530 at 941.280 kb on - strand, within A4249_RS04530 at 941.280 kb on - strand, within A4249_RS04530 at 941.280 kb on - strand, within A4249_RS04530 at 941.280 kb on - strand, within A4249_RS04530 at 941.397 kb on + strand, within A4249_RS04530 at 941.397 kb on + strand, within A4249_RS04530 at 941.398 kb on - strand, within A4249_RS04530 at 941.398 kb on - strand, within A4249_RS04530 at 941.406 kb on + strand, within A4249_RS04530 at 941.406 kb on + strand, within A4249_RS04530 at 941.406 kb on + strand, within A4249_RS04530 at 941.406 kb on + strand, within A4249_RS04530 at 941.407 kb on - strand, within A4249_RS04530 at 941.407 kb on - strand, within A4249_RS04530
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C) remove 938,504 + A4249_RS04510 0.63 -0.4 938,504 + A4249_RS04510 0.63 -0.3 938,504 + A4249_RS04510 0.63 -0.0 938,505 - A4249_RS04510 0.64 -0.4 938,505 - A4249_RS04510 0.64 -1.2 938,682 - -0.1 938,682 - -0.6 938,744 + +1.0 938,745 - +1.1 938,745 - -0.5 938,747 + +1.5 938,747 + -0.2 938,747 + -0.3 938,748 - -1.1 938,763 + -0.5 938,763 + -0.4 938,763 + -0.5 938,764 - -0.3 938,939 + A4249_RS04515 0.26 -1.3 938,939 + A4249_RS04515 0.26 +0.9 938,939 + A4249_RS04515 0.26 -1.5 938,939 + A4249_RS04515 0.26 +0.6 938,939 + A4249_RS04515 0.26 -0.5 938,940 - A4249_RS04515 0.26 -0.5 938,940 - A4249_RS04515 0.26 -0.5 938,940 - A4249_RS04515 0.26 +0.3 938,940 - A4249_RS04515 0.26 +0.4 938,940 - A4249_RS04515 0.26 +0.5 938,940 - A4249_RS04515 0.26 -0.4 938,940 - A4249_RS04515 0.26 +0.7 938,940 - A4249_RS04515 0.26 -0.4 938,951 + A4249_RS04515 0.29 -0.2 938,952 - A4249_RS04515 0.29 -1.4 938,952 - A4249_RS04515 0.29 -0.1 939,032 + A4249_RS04515 0.46 -0.2 939,032 + A4249_RS04515 0.46 +0.3 939,032 + A4249_RS04515 0.46 +0.2 939,032 + A4249_RS04515 0.46 +0.5 939,033 - A4249_RS04515 0.46 +0.1 939,033 - A4249_RS04515 0.46 -0.3 939,033 - A4249_RS04515 0.46 -0.3 939,033 - A4249_RS04515 0.46 -1.1 939,082 + A4249_RS04515 0.57 +0.2 939,082 + A4249_RS04515 0.57 +0.3 939,082 + A4249_RS04515 0.57 +0.3 939,083 - A4249_RS04515 0.57 +0.2 939,083 - A4249_RS04515 0.57 -1.5 939,083 - A4249_RS04515 0.57 -0.4 939,083 - A4249_RS04515 0.57 -0.1 939,083 - A4249_RS04515 0.57 -0.2 939,083 - A4249_RS04515 0.57 +0.3 939,173 + A4249_RS04515 0.76 +0.2 939,174 - A4249_RS04515 0.77 +0.2 939,174 - A4249_RS04515 0.77 -0.0 939,179 + A4249_RS04515 0.78 -1.8 939,179 + A4249_RS04515 0.78 -1.3 939,179 + A4249_RS04515 0.78 -0.4 939,179 + A4249_RS04515 0.78 -0.1 939,179 + A4249_RS04515 0.78 -0.3 939,179 + A4249_RS04515 0.78 -0.2 939,179 + A4249_RS04515 0.78 +0.4 939,180 - A4249_RS04515 0.78 +0.4 939,180 - A4249_RS04515 0.78 +0.5 939,180 - A4249_RS04515 0.78 +1.1 940,549 + -0.4 940,550 - -0.2 940,550 - -0.9 940,628 + -0.7 940,628 + +1.0 940,628 + -0.1 940,629 - -0.4 940,629 - +0.0 940,629 - -0.2 940,629 - -0.6 940,638 - -0.2 940,749 + +0.2 940,749 + +0.7 940,749 + -0.0 940,749 + +0.2 940,749 + -0.1 940,750 - -0.6 940,750 - +0.5 940,750 - +0.9 940,750 - -0.4 940,750 - -0.5 940,750 - -0.1 940,750 - -3.1 940,750 - +1.4 940,750 - +0.1 940,775 + +0.8 940,817 - -0.5 940,818 + +0.2 940,818 + +0.3 940,818 + +0.3 940,818 + -0.9 940,818 + -0.7 940,819 - -1.0 940,819 - -0.8 940,819 - -1.1 940,819 - +0.6 940,819 - +1.4 940,831 + +0.6 940,832 - +0.1 940,834 + -0.8 940,840 + -0.3 940,840 + -0.7 940,841 - +0.2 940,841 - +0.3 940,866 - -0.4 940,893 - A4249_RS04525 0.13 -0.7 940,893 - A4249_RS04525 0.13 +0.0 940,893 - A4249_RS04525 0.13 -1.0 941,010 + A4249_RS04525 0.68 -0.5 941,010 + A4249_RS04525 0.68 +0.9 941,010 + A4249_RS04525 0.68 -0.2 941,010 + A4249_RS04525 0.68 -0.7 941,010 + A4249_RS04525 0.68 +0.1 941,010 + A4249_RS04525 0.68 -0.2 941,010 + A4249_RS04525 0.68 +0.1 941,011 - A4249_RS04525 0.68 +1.1 941,011 - A4249_RS04525 0.68 -0.5 941,011 - A4249_RS04525 0.68 -0.0 941,011 - A4249_RS04525 0.68 -1.5 941,011 - A4249_RS04525 0.68 +0.9 941,021 + A4249_RS04525 0.73 -0.8 941,022 - A4249_RS04525 0.73 +0.4 941,045 + A4249_RS04525 0.84 -0.5 941,045 + A4249_RS04525 0.84 +0.1 941,045 + A4249_RS04525 0.84 +1.4 941,045 + A4249_RS04525 0.84 -0.5 941,045 + A4249_RS04525 0.84 -0.4 941,045 + A4249_RS04525 0.84 -0.2 941,045 + A4249_RS04525 0.84 -0.6 941,045 + A4249_RS04525 0.84 -1.4 941,045 + A4249_RS04525 0.84 -0.1 941,046 - A4249_RS04525 0.84 +0.2 941,046 - A4249_RS04525 0.84 +1.1 941,046 - A4249_RS04525 0.84 +0.4 941,046 - A4249_RS04525 0.84 +0.2 941,104 + +0.4 941,104 + +0.4 941,105 - -0.8 941,107 + +0.2 941,107 + -1.2 941,107 + +0.4 941,107 + -0.9 941,107 + -0.0 941,169 + -1.0 941,180 + -0.0 941,180 + -1.2 941,180 + -0.5 941,180 + +0.3 941,180 + +0.6 941,180 + +0.1 941,181 - +0.4 941,181 - +0.3 941,181 - +0.1 941,181 - -0.8 941,181 - +0.5 941,277 + A4249_RS04530 0.19 -0.2 941,277 + A4249_RS04530 0.19 -2.7 941,277 + A4249_RS04530 0.19 +0.7 941,277 + A4249_RS04530 0.19 +1.1 941,277 + A4249_RS04530 0.19 +0.4 941,277 + A4249_RS04530 0.19 -0.3 941,277 + A4249_RS04530 0.19 +0.1 941,277 + A4249_RS04530 0.19 -0.1 941,277 + A4249_RS04530 0.19 +0.0 941,277 + A4249_RS04530 0.19 +0.9 941,277 + A4249_RS04530 0.19 -0.5 941,277 + A4249_RS04530 0.19 -0.2 941,277 + A4249_RS04530 0.19 -0.2 941,277 + A4249_RS04530 0.19 -0.2 941,277 + A4249_RS04530 0.19 -0.1 941,277 + A4249_RS04530 0.19 +0.4 941,277 + A4249_RS04530 0.19 +1.7 941,277 + A4249_RS04530 0.19 -0.6 941,278 - A4249_RS04530 0.19 +0.3 941,278 - A4249_RS04530 0.19 -0.9 941,278 - A4249_RS04530 0.19 -1.7 941,278 - A4249_RS04530 0.19 -0.8 941,278 - A4249_RS04530 0.19 +0.6 941,278 - A4249_RS04530 0.19 +0.5 941,278 - A4249_RS04530 0.19 +0.4 941,278 - A4249_RS04530 0.19 +1.0 941,279 + A4249_RS04530 0.19 -0.0 941,279 + A4249_RS04530 0.19 +0.0 941,279 + A4249_RS04530 0.19 -0.6 941,279 + A4249_RS04530 0.19 +1.0 941,279 + A4249_RS04530 0.19 -0.1 941,279 + A4249_RS04530 0.19 -0.1 941,279 + A4249_RS04530 0.19 -0.5 941,279 + A4249_RS04530 0.19 +0.5 941,279 + A4249_RS04530 0.19 -0.2 941,279 + A4249_RS04530 0.19 +0.7 941,279 + A4249_RS04530 0.19 -0.8 941,279 + A4249_RS04530 0.19 +0.7 941,279 + A4249_RS04530 0.19 +0.3 941,279 + A4249_RS04530 0.19 +0.3 941,280 - A4249_RS04530 0.19 -0.0 941,280 - A4249_RS04530 0.19 +0.5 941,280 - A4249_RS04530 0.19 -1.0 941,280 - A4249_RS04530 0.19 +0.4 941,280 - A4249_RS04530 0.19 +1.4 941,280 - A4249_RS04530 0.19 +0.2 941,280 - A4249_RS04530 0.19 +0.5 941,280 - A4249_RS04530 0.19 -0.3 941,280 - A4249_RS04530 0.19 -0.0 941,280 - A4249_RS04530 0.19 +0.4 941,280 - A4249_RS04530 0.19 +0.5 941,280 - A4249_RS04530 0.19 -0.0 941,397 + A4249_RS04530 0.42 +0.2 941,397 + A4249_RS04530 0.42 +0.6 941,398 - A4249_RS04530 0.43 -0.4 941,398 - A4249_RS04530 0.43 +0.8 941,406 + A4249_RS04530 0.44 +0.7 941,406 + A4249_RS04530 0.44 +0.1 941,406 + A4249_RS04530 0.44 +0.3 941,406 + A4249_RS04530 0.44 +0.7 941,407 - A4249_RS04530 0.44 +0.6 941,407 - A4249_RS04530 0.44 -1.4
Or see this region's nucleotide sequence