Experiment: Adenine 0.74 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS03490 and A4249_RS03495 are separated by 96 nucleotides A4249_RS03495 and A4249_RS03500 are separated by 2 nucleotides A4249_RS03500 and A4249_RS03505 overlap by 1 nucleotides
A4249_RS03490: A4249_RS03490 - LysR family transcriptional regulator, at 727,354 to 728,232
_RS03490
A4249_RS03495: A4249_RS03495 - type 1 glutamine amidotransferase domain-containing protein, at 728,329 to 729,138
_RS03495
A4249_RS03500: A4249_RS03500 - VOC family protein, at 729,141 to 729,596
_RS03500
A4249_RS03505: A4249_RS03505 - NADH:flavin oxidoreductase/NADH oxidase, at 729,596 to 730,702
_RS03505
Position (kb) 728
729
730 Strain fitness (log2 ratio) -2
-1
0
1 at 727.355 kb on + strand at 727.355 kb on + strand at 727.355 kb on + strand at 727.355 kb on + strand at 727.355 kb on + strand at 727.355 kb on + strand at 727.355 kb on + strand at 727.355 kb on + strand at 727.355 kb on + strand at 727.355 kb on + strand at 727.355 kb on + strand at 727.355 kb on + strand at 727.356 kb on - strand at 727.356 kb on - strand at 727.356 kb on - strand at 727.356 kb on - strand at 727.356 kb on - strand at 727.356 kb on - strand at 727.356 kb on - strand at 727.356 kb on - strand at 727.356 kb on - strand at 727.356 kb on - strand at 727.356 kb on - strand at 727.356 kb on - strand at 727.356 kb on - strand at 727.356 kb on - strand at 727.436 kb on + strand at 727.436 kb on + strand at 727.436 kb on + strand at 727.436 kb on + strand at 727.436 kb on + strand at 727.437 kb on - strand at 727.437 kb on - strand at 727.437 kb on - strand at 727.437 kb on - strand at 727.437 kb on - strand at 727.437 kb on - strand at 727.437 kb on - strand at 727.439 kb on + strand at 727.439 kb on + strand at 727.439 kb on + strand at 727.439 kb on + strand at 727.439 kb on + strand at 727.439 kb on + strand at 727.439 kb on + strand at 727.439 kb on + strand at 727.439 kb on + strand at 727.439 kb on + strand at 727.439 kb on + strand at 727.439 kb on + strand at 727.440 kb on - strand at 727.440 kb on - strand at 727.440 kb on - strand at 727.472 kb on - strand, within A4249_RS03490 at 727.515 kb on - strand, within A4249_RS03490 at 727.565 kb on - strand, within A4249_RS03490 at 727.658 kb on + strand, within A4249_RS03490 at 727.659 kb on - strand, within A4249_RS03490 at 727.841 kb on + strand, within A4249_RS03490 at 727.841 kb on + strand, within A4249_RS03490 at 727.841 kb on + strand, within A4249_RS03490 at 727.841 kb on + strand, within A4249_RS03490 at 727.841 kb on + strand, within A4249_RS03490 at 727.842 kb on - strand, within A4249_RS03490 at 727.842 kb on - strand, within A4249_RS03490 at 727.842 kb on - strand, within A4249_RS03490 at 727.842 kb on - strand, within A4249_RS03490 at 727.842 kb on - strand, within A4249_RS03490 at 727.842 kb on - strand, within A4249_RS03490 at 728.195 kb on + strand at 728.196 kb on - strand at 728.301 kb on + strand at 728.301 kb on + strand at 728.301 kb on + strand at 728.301 kb on + strand at 728.301 kb on + strand at 728.301 kb on + strand at 728.302 kb on - strand at 728.302 kb on - strand at 728.302 kb on - strand at 728.302 kb on - strand at 728.302 kb on - strand at 728.302 kb on - strand at 728.302 kb on - strand at 728.302 kb on - strand at 728.302 kb on - strand at 728.302 kb on - strand at 728.305 kb on + strand at 728.305 kb on + strand at 728.305 kb on + strand at 728.305 kb on + strand at 728.305 kb on + strand at 728.306 kb on - strand at 728.306 kb on - strand at 728.526 kb on + strand, within A4249_RS03495 at 728.526 kb on + strand, within A4249_RS03495 at 728.526 kb on + strand, within A4249_RS03495 at 728.526 kb on + strand, within A4249_RS03495 at 728.526 kb on + strand, within A4249_RS03495 at 728.526 kb on + strand, within A4249_RS03495 at 728.527 kb on - strand, within A4249_RS03495 at 728.527 kb on - strand, within A4249_RS03495 at 728.527 kb on - strand, within A4249_RS03495 at 728.527 kb on - strand, within A4249_RS03495 at 728.527 kb on - strand, within A4249_RS03495 at 728.527 kb on - strand, within A4249_RS03495 at 728.528 kb on - strand, within A4249_RS03495 at 728.536 kb on + strand, within A4249_RS03495 at 728.536 kb on + strand, within A4249_RS03495 at 728.536 kb on + strand, within A4249_RS03495 at 728.537 kb on - strand, within A4249_RS03495 at 728.537 kb on - strand, within A4249_RS03495 at 728.539 kb on + strand, within A4249_RS03495 at 728.539 kb on + strand, within A4249_RS03495 at 728.539 kb on + strand, within A4249_RS03495 at 728.539 kb on + strand, within A4249_RS03495 at 728.539 kb on + strand, within A4249_RS03495 at 728.539 kb on + strand, within A4249_RS03495 at 728.539 kb on + strand, within A4249_RS03495 at 728.539 kb on + strand, within A4249_RS03495 at 728.539 kb on + strand, within A4249_RS03495 at 728.539 kb on + strand, within A4249_RS03495 at 728.539 kb on + strand, within A4249_RS03495 at 728.540 kb on - strand, within A4249_RS03495 at 728.540 kb on - strand, within A4249_RS03495 at 728.540 kb on - strand, within A4249_RS03495 at 728.540 kb on - strand, within A4249_RS03495 at 728.540 kb on - strand, within A4249_RS03495 at 728.540 kb on - strand, within A4249_RS03495 at 728.540 kb on - strand, within A4249_RS03495 at 728.540 kb on - strand, within A4249_RS03495 at 728.656 kb on + strand, within A4249_RS03495 at 728.656 kb on + strand, within A4249_RS03495 at 728.656 kb on + strand, within A4249_RS03495 at 728.661 kb on + strand, within A4249_RS03495 at 728.688 kb on + strand, within A4249_RS03495 at 728.689 kb on - strand, within A4249_RS03495 at 728.702 kb on + strand, within A4249_RS03495 at 728.703 kb on - strand, within A4249_RS03495 at 728.703 kb on - strand, within A4249_RS03495 at 728.729 kb on - strand, within A4249_RS03495 at 728.774 kb on - strand, within A4249_RS03495 at 729.147 kb on + strand at 729.147 kb on + strand at 729.147 kb on + strand at 729.147 kb on + strand at 729.252 kb on + strand, within A4249_RS03500 at 729.253 kb on - strand, within A4249_RS03500 at 729.264 kb on + strand, within A4249_RS03500 at 729.264 kb on + strand, within A4249_RS03500 at 729.264 kb on + strand, within A4249_RS03500 at 729.264 kb on + strand, within A4249_RS03500 at 729.264 kb on + strand, within A4249_RS03500 at 729.264 kb on + strand, within A4249_RS03500 at 729.265 kb on - strand, within A4249_RS03500 at 729.265 kb on - strand, within A4249_RS03500 at 729.265 kb on - strand, within A4249_RS03500 at 729.265 kb on - strand, within A4249_RS03500 at 729.265 kb on - strand, within A4249_RS03500 at 729.265 kb on - strand, within A4249_RS03500 at 729.265 kb on - strand, within A4249_RS03500 at 729.330 kb on + strand, within A4249_RS03500 at 729.330 kb on + strand, within A4249_RS03500 at 729.330 kb on + strand, within A4249_RS03500 at 729.330 kb on + strand, within A4249_RS03500 at 729.330 kb on + strand, within A4249_RS03500 at 729.330 kb on + strand, within A4249_RS03500 at 729.330 kb on + strand, within A4249_RS03500 at 729.330 kb on + strand, within A4249_RS03500 at 729.331 kb on - strand, within A4249_RS03500 at 729.331 kb on - strand, within A4249_RS03500 at 729.331 kb on - strand, within A4249_RS03500 at 729.331 kb on - strand, within A4249_RS03500 at 729.331 kb on - strand, within A4249_RS03500 at 729.331 kb on - strand, within A4249_RS03500 at 729.331 kb on - strand, within A4249_RS03500 at 729.331 kb on - strand, within A4249_RS03500 at 729.331 kb on - strand, within A4249_RS03500 at 729.370 kb on - strand, within A4249_RS03500 at 729.420 kb on + strand, within A4249_RS03500 at 729.420 kb on + strand, within A4249_RS03500 at 729.420 kb on + strand, within A4249_RS03500 at 729.420 kb on + strand, within A4249_RS03500 at 729.420 kb on + strand, within A4249_RS03500 at 729.420 kb on + strand, within A4249_RS03500 at 729.421 kb on - strand, within A4249_RS03500 at 729.421 kb on - strand, within A4249_RS03500 at 729.421 kb on - strand, within A4249_RS03500 at 729.421 kb on - strand, within A4249_RS03500 at 729.421 kb on - strand, within A4249_RS03500 at 729.421 kb on - strand, within A4249_RS03500 at 729.421 kb on - strand, within A4249_RS03500 at 729.483 kb on + strand, within A4249_RS03500 at 729.483 kb on + strand, within A4249_RS03500 at 729.483 kb on + strand, within A4249_RS03500 at 729.483 kb on + strand, within A4249_RS03500 at 729.483 kb on + strand, within A4249_RS03500 at 729.483 kb on + strand, within A4249_RS03500 at 729.483 kb on + strand, within A4249_RS03500 at 729.483 kb on + strand, within A4249_RS03500 at 729.483 kb on + strand, within A4249_RS03500 at 729.483 kb on + strand, within A4249_RS03500 at 729.484 kb on - strand, within A4249_RS03500 at 729.484 kb on - strand, within A4249_RS03500 at 729.484 kb on - strand, within A4249_RS03500 at 729.484 kb on - strand, within A4249_RS03500 at 729.484 kb on - strand, within A4249_RS03500 at 729.484 kb on - strand, within A4249_RS03500 at 729.484 kb on - strand, within A4249_RS03500 at 729.674 kb on + strand at 729.674 kb on + strand at 729.674 kb on + strand at 729.674 kb on + strand at 729.674 kb on + strand at 729.675 kb on - strand at 729.675 kb on - strand at 729.675 kb on - strand at 729.759 kb on + strand, within A4249_RS03505 at 729.759 kb on + strand, within A4249_RS03505 at 729.759 kb on + strand, within A4249_RS03505 at 729.759 kb on + strand, within A4249_RS03505 at 729.760 kb on - strand, within A4249_RS03505 at 729.760 kb on - strand, within A4249_RS03505 at 729.797 kb on + strand, within A4249_RS03505 at 729.798 kb on - strand, within A4249_RS03505 at 729.798 kb on - strand, within A4249_RS03505 at 729.798 kb on - strand, within A4249_RS03505 at 729.798 kb on - strand, within A4249_RS03505 at 729.815 kb on + strand, within A4249_RS03505 at 729.815 kb on + strand, within A4249_RS03505 at 729.816 kb on - strand, within A4249_RS03505 at 729.816 kb on - strand, within A4249_RS03505
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C) remove 727,355 + -0.4 727,355 + -0.1 727,355 + +1.5 727,355 + -0.3 727,355 + -0.3 727,355 + -0.5 727,355 + +0.0 727,355 + +0.2 727,355 + +0.3 727,355 + -0.1 727,355 + -0.4 727,355 + +0.2 727,356 - +0.3 727,356 - +0.5 727,356 - +0.7 727,356 - -0.8 727,356 - -1.1 727,356 - +0.1 727,356 - -0.6 727,356 - -0.6 727,356 - +0.3 727,356 - +0.4 727,356 - -0.1 727,356 - -0.0 727,356 - -0.0 727,356 - +0.3 727,436 + +1.0 727,436 + -0.2 727,436 + -0.5 727,436 + +0.3 727,436 + +0.5 727,437 - -0.6 727,437 - -0.4 727,437 - -0.3 727,437 - -0.4 727,437 - -0.4 727,437 - -0.6 727,437 - -0.6 727,439 + +0.3 727,439 + +1.5 727,439 + -0.4 727,439 + -0.1 727,439 + -1.1 727,439 + -0.4 727,439 + -1.5 727,439 + +1.1 727,439 + -0.2 727,439 + +0.2 727,439 + +0.0 727,439 + +1.1 727,440 - -0.9 727,440 - +0.2 727,440 - +1.0 727,472 - A4249_RS03490 0.13 +0.3 727,515 - A4249_RS03490 0.18 -1.4 727,565 - A4249_RS03490 0.24 +0.5 727,658 + A4249_RS03490 0.35 +0.1 727,659 - A4249_RS03490 0.35 +0.4 727,841 + A4249_RS03490 0.55 -1.1 727,841 + A4249_RS03490 0.55 -0.5 727,841 + A4249_RS03490 0.55 -1.1 727,841 + A4249_RS03490 0.55 +0.2 727,841 + A4249_RS03490 0.55 -0.5 727,842 - A4249_RS03490 0.56 -1.9 727,842 - A4249_RS03490 0.56 +0.1 727,842 - A4249_RS03490 0.56 +0.2 727,842 - A4249_RS03490 0.56 -0.9 727,842 - A4249_RS03490 0.56 +1.3 727,842 - A4249_RS03490 0.56 -0.1 728,195 + -0.7 728,196 - +0.1 728,301 + +0.9 728,301 + +0.5 728,301 + -1.3 728,301 + -0.6 728,301 + -0.2 728,301 + -0.9 728,302 - -0.3 728,302 - -0.4 728,302 - -0.6 728,302 - -0.0 728,302 - +0.4 728,302 - +0.2 728,302 - +0.3 728,302 - -0.9 728,302 - -0.4 728,302 - +0.3 728,305 + -1.9 728,305 + -0.0 728,305 + +0.4 728,305 + -0.7 728,305 + -1.2 728,306 - -0.1 728,306 - -0.0 728,526 + A4249_RS03495 0.24 +0.1 728,526 + A4249_RS03495 0.24 -1.4 728,526 + A4249_RS03495 0.24 +0.5 728,526 + A4249_RS03495 0.24 +0.7 728,526 + A4249_RS03495 0.24 +0.3 728,526 + A4249_RS03495 0.24 +0.2 728,527 - A4249_RS03495 0.24 +0.8 728,527 - A4249_RS03495 0.24 -0.2 728,527 - A4249_RS03495 0.24 -0.0 728,527 - A4249_RS03495 0.24 -0.5 728,527 - A4249_RS03495 0.24 +0.6 728,527 - A4249_RS03495 0.24 +0.2 728,528 - A4249_RS03495 0.25 +0.2 728,536 + A4249_RS03495 0.26 +0.8 728,536 + A4249_RS03495 0.26 -0.6 728,536 + A4249_RS03495 0.26 +0.2 728,537 - A4249_RS03495 0.26 +0.8 728,537 - A4249_RS03495 0.26 -0.0 728,539 + A4249_RS03495 0.26 -0.4 728,539 + A4249_RS03495 0.26 +0.4 728,539 + A4249_RS03495 0.26 +0.3 728,539 + A4249_RS03495 0.26 +0.4 728,539 + A4249_RS03495 0.26 -1.0 728,539 + A4249_RS03495 0.26 +0.1 728,539 + A4249_RS03495 0.26 +0.5 728,539 + A4249_RS03495 0.26 -2.1 728,539 + A4249_RS03495 0.26 -0.8 728,539 + A4249_RS03495 0.26 -0.1 728,539 + A4249_RS03495 0.26 -0.7 728,540 - A4249_RS03495 0.26 -0.5 728,540 - A4249_RS03495 0.26 -0.6 728,540 - A4249_RS03495 0.26 +0.5 728,540 - A4249_RS03495 0.26 -0.1 728,540 - A4249_RS03495 0.26 -0.2 728,540 - A4249_RS03495 0.26 -0.2 728,540 - A4249_RS03495 0.26 -1.2 728,540 - A4249_RS03495 0.26 -0.2 728,656 + A4249_RS03495 0.40 -0.5 728,656 + A4249_RS03495 0.40 -0.6 728,656 + A4249_RS03495 0.40 +0.4 728,661 + A4249_RS03495 0.41 -1.4 728,688 + A4249_RS03495 0.44 +1.2 728,689 - A4249_RS03495 0.44 -0.5 728,702 + A4249_RS03495 0.46 -0.3 728,703 - A4249_RS03495 0.46 +1.2 728,703 - A4249_RS03495 0.46 -1.2 728,729 - A4249_RS03495 0.49 -0.7 728,774 - A4249_RS03495 0.55 +0.6 729,147 + -0.1 729,147 + +0.5 729,147 + -0.3 729,147 + -0.8 729,252 + A4249_RS03500 0.24 -0.5 729,253 - A4249_RS03500 0.25 +0.7 729,264 + A4249_RS03500 0.27 -0.1 729,264 + A4249_RS03500 0.27 +0.2 729,264 + A4249_RS03500 0.27 +0.2 729,264 + A4249_RS03500 0.27 -0.3 729,264 + A4249_RS03500 0.27 +0.3 729,264 + A4249_RS03500 0.27 -0.7 729,265 - A4249_RS03500 0.27 -0.4 729,265 - A4249_RS03500 0.27 +0.7 729,265 - A4249_RS03500 0.27 -0.9 729,265 - A4249_RS03500 0.27 -0.1 729,265 - A4249_RS03500 0.27 -0.3 729,265 - A4249_RS03500 0.27 -0.3 729,265 - A4249_RS03500 0.27 -0.4 729,330 + A4249_RS03500 0.41 -0.2 729,330 + A4249_RS03500 0.41 -0.2 729,330 + A4249_RS03500 0.41 +1.5 729,330 + A4249_RS03500 0.41 -0.3 729,330 + A4249_RS03500 0.41 +0.1 729,330 + A4249_RS03500 0.41 -0.4 729,330 + A4249_RS03500 0.41 -0.3 729,330 + A4249_RS03500 0.41 +0.0 729,331 - A4249_RS03500 0.42 -0.8 729,331 - A4249_RS03500 0.42 -0.7 729,331 - A4249_RS03500 0.42 -0.5 729,331 - A4249_RS03500 0.42 +0.4 729,331 - A4249_RS03500 0.42 +1.0 729,331 - A4249_RS03500 0.42 -0.9 729,331 - A4249_RS03500 0.42 -0.5 729,331 - A4249_RS03500 0.42 -0.1 729,331 - A4249_RS03500 0.42 -0.8 729,370 - A4249_RS03500 0.50 +0.7 729,420 + A4249_RS03500 0.61 +1.0 729,420 + A4249_RS03500 0.61 +0.5 729,420 + A4249_RS03500 0.61 +0.4 729,420 + A4249_RS03500 0.61 -0.1 729,420 + A4249_RS03500 0.61 -0.4 729,420 + A4249_RS03500 0.61 +1.2 729,421 - A4249_RS03500 0.61 -0.2 729,421 - A4249_RS03500 0.61 -0.2 729,421 - A4249_RS03500 0.61 -0.3 729,421 - A4249_RS03500 0.61 +0.1 729,421 - A4249_RS03500 0.61 +0.3 729,421 - A4249_RS03500 0.61 -2.5 729,421 - A4249_RS03500 0.61 -1.0 729,483 + A4249_RS03500 0.75 +1.7 729,483 + A4249_RS03500 0.75 +0.2 729,483 + A4249_RS03500 0.75 -0.3 729,483 + A4249_RS03500 0.75 -0.0 729,483 + A4249_RS03500 0.75 +0.7 729,483 + A4249_RS03500 0.75 +0.2 729,483 + A4249_RS03500 0.75 -0.3 729,483 + A4249_RS03500 0.75 +0.7 729,483 + A4249_RS03500 0.75 -1.4 729,483 + A4249_RS03500 0.75 -1.2 729,484 - A4249_RS03500 0.75 +0.6 729,484 - A4249_RS03500 0.75 -0.3 729,484 - A4249_RS03500 0.75 +0.8 729,484 - A4249_RS03500 0.75 +0.0 729,484 - A4249_RS03500 0.75 +1.0 729,484 - A4249_RS03500 0.75 -1.4 729,484 - A4249_RS03500 0.75 -0.4 729,674 + -0.6 729,674 + +0.6 729,674 + +1.1 729,674 + -0.3 729,674 + +0.1 729,675 - -1.2 729,675 - -0.8 729,675 - -0.0 729,759 + A4249_RS03505 0.15 -0.4 729,759 + A4249_RS03505 0.15 +0.1 729,759 + A4249_RS03505 0.15 -0.1 729,759 + A4249_RS03505 0.15 -0.5 729,760 - A4249_RS03505 0.15 -0.2 729,760 - A4249_RS03505 0.15 +0.1 729,797 + A4249_RS03505 0.18 -0.1 729,798 - A4249_RS03505 0.18 +0.7 729,798 - A4249_RS03505 0.18 -0.2 729,798 - A4249_RS03505 0.18 +0.0 729,798 - A4249_RS03505 0.18 -0.5 729,815 + A4249_RS03505 0.20 +0.8 729,815 + A4249_RS03505 0.20 +0.1 729,816 - A4249_RS03505 0.20 +0.6 729,816 - A4249_RS03505 0.20 -0.2
Or see this region's nucleotide sequence