Experiment: Adenine 0.74 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS01810 and A4249_RS01815 are separated by 309 nucleotides A4249_RS01815 and A4249_RS01820 overlap by 4 nucleotides
A4249_RS01810: A4249_RS01810 - hypothetical protein, at 348,200 to 351,952
_RS01810
A4249_RS01815: A4249_RS01815 - DNA mismatch endonuclease Vsr, at 352,262 to 352,636
_RS01815
A4249_RS01820: A4249_RS01820 - DNA cytosine methyltransferase, at 352,633 to 353,844
_RS01820
Position (kb) 352
353 Strain fitness (log2 ratio) -2
-1
0
1
2 at 351.329 kb on + strand, within A4249_RS01810 at 351.568 kb on + strand, within A4249_RS01810 at 351.589 kb on + strand at 351.614 kb on + strand at 351.614 kb on + strand at 351.614 kb on + strand at 351.614 kb on + strand at 351.615 kb on - strand at 351.615 kb on - strand at 351.699 kb on + strand at 351.699 kb on + strand at 351.699 kb on + strand at 351.699 kb on + strand at 351.699 kb on + strand at 351.699 kb on + strand at 351.699 kb on + strand at 351.699 kb on + strand at 351.699 kb on + strand at 351.700 kb on - strand at 351.700 kb on - strand at 351.700 kb on - strand at 351.700 kb on - strand at 351.700 kb on - strand at 351.700 kb on - strand at 351.723 kb on + strand at 351.723 kb on + strand at 351.723 kb on + strand at 351.723 kb on + strand at 351.723 kb on + strand at 351.723 kb on + strand at 351.724 kb on - strand at 351.724 kb on - strand at 351.724 kb on - strand at 351.724 kb on - strand at 351.724 kb on - strand at 351.724 kb on - strand at 351.724 kb on - strand at 351.817 kb on + strand at 351.818 kb on - strand at 351.818 kb on - strand at 351.821 kb on + strand at 351.870 kb on + strand at 351.870 kb on + strand at 351.870 kb on + strand at 351.870 kb on + strand at 351.870 kb on + strand at 351.870 kb on + strand at 351.870 kb on + strand at 351.871 kb on - strand at 351.871 kb on - strand at 351.871 kb on - strand at 351.871 kb on - strand at 351.871 kb on - strand at 351.871 kb on - strand at 351.871 kb on - strand at 351.871 kb on - strand at 351.871 kb on - strand at 351.871 kb on - strand at 351.871 kb on - strand at 351.871 kb on - strand at 351.871 kb on - strand at 351.898 kb on + strand at 351.898 kb on + strand at 351.899 kb on - strand at 351.899 kb on - strand at 351.899 kb on - strand at 351.899 kb on - strand at 351.950 kb on + strand at 351.951 kb on - strand at 351.951 kb on - strand at 351.951 kb on - strand at 351.983 kb on + strand at 351.984 kb on - strand at 351.984 kb on - strand at 352.078 kb on + strand at 352.078 kb on + strand at 352.078 kb on + strand at 352.078 kb on + strand at 352.078 kb on + strand at 352.078 kb on + strand at 352.078 kb on + strand at 352.078 kb on + strand at 352.079 kb on - strand at 352.079 kb on - strand at 352.079 kb on - strand at 352.141 kb on + strand at 352.142 kb on - strand at 352.407 kb on + strand, within A4249_RS01815 at 352.407 kb on + strand, within A4249_RS01815 at 352.407 kb on + strand, within A4249_RS01815 at 352.407 kb on + strand, within A4249_RS01815 at 352.407 kb on + strand, within A4249_RS01815
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C) remove 351,329 + A4249_RS01810 0.83 +1.1 351,568 + A4249_RS01810 0.90 +0.3 351,589 + +0.5 351,614 + +0.6 351,614 + +0.9 351,614 + +0.1 351,614 + -2.0 351,615 - +1.5 351,615 - +0.4 351,699 + -0.7 351,699 + +1.1 351,699 + -1.2 351,699 + -1.0 351,699 + +0.9 351,699 + -0.6 351,699 + -0.1 351,699 + -0.4 351,699 + -0.7 351,700 - +0.4 351,700 - -0.0 351,700 - -0.9 351,700 - +0.7 351,700 - +0.4 351,700 - -0.4 351,723 + -1.0 351,723 + +0.5 351,723 + -1.0 351,723 + -0.1 351,723 + -1.0 351,723 + -0.4 351,724 - -1.5 351,724 - +0.2 351,724 - +0.5 351,724 - +1.6 351,724 - +0.3 351,724 - +1.5 351,724 - -0.5 351,817 + -0.5 351,818 - -0.3 351,818 - +0.9 351,821 + +1.1 351,870 + -1.4 351,870 + +0.3 351,870 + +0.7 351,870 + +0.7 351,870 + -0.1 351,870 + +0.9 351,870 + -0.9 351,871 - -0.8 351,871 - -0.3 351,871 - +0.6 351,871 - +0.1 351,871 - -0.6 351,871 - -1.6 351,871 - -0.7 351,871 - -1.3 351,871 - +1.1 351,871 - +1.5 351,871 - +1.1 351,871 - +0.8 351,871 - -0.7 351,898 + +1.6 351,898 + +0.2 351,899 - +1.1 351,899 - +0.5 351,899 - -0.0 351,899 - -0.1 351,950 + -0.1 351,951 - +0.7 351,951 - +0.5 351,951 - -0.3 351,983 + +1.0 351,984 - -0.4 351,984 - +0.0 352,078 + -0.1 352,078 + +1.8 352,078 + -1.3 352,078 + +0.9 352,078 + -0.1 352,078 + +0.2 352,078 + +0.9 352,078 + -0.3 352,079 - -0.6 352,079 - +0.4 352,079 - -0.2 352,141 + -0.5 352,142 - +0.1 352,407 + A4249_RS01815 0.39 +0.6 352,407 + A4249_RS01815 0.39 +0.0 352,407 + A4249_RS01815 0.39 -0.7 352,407 + A4249_RS01815 0.39 +0.3 352,407 + A4249_RS01815 0.39 -0.5
Or see this region's nucleotide sequence