Experiment: Adenine 0.74 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS01660 and A4249_RS01665 are separated by 44 nucleotides A4249_RS01665 and A4249_RS01670 are separated by 21 nucleotides A4249_RS01670 and A4249_RS01675 are separated by 16 nucleotides A4249_RS01675 and A4249_RS01680 overlap by 4 nucleotides
A4249_RS01660: A4249_RS01660 - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, at 316,114 to 316,758
_RS01660
A4249_RS01665: A4249_RS01665 - carbonic anhydrase, at 316,803 to 317,426
_RS01665
A4249_RS01670: A4249_RS01670 - excinuclease ABC subunit UvrC, at 317,448 to 319,328
_RS01670
A4249_RS01675: A4249_RS01675 - DMT family transporter, at 319,345 to 319,791
_RS01675
A4249_RS01680: A4249_RS01680 - hypothetical protein, at 319,788 to 320,396
_RS01680
Position (kb) 317
318
319
320 Strain fitness (log2 ratio) -2
-1
0
1 at 316.845 kb on - strand at 317.438 kb on + strand at 317.438 kb on + strand at 317.438 kb on + strand at 317.438 kb on + strand at 317.439 kb on - strand at 317.439 kb on - strand at 317.456 kb on + strand at 317.456 kb on + strand at 317.456 kb on + strand at 317.457 kb on - strand at 317.457 kb on - strand at 317.790 kb on - strand, within A4249_RS01670 at 317.986 kb on + strand, within A4249_RS01670 at 317.987 kb on - strand, within A4249_RS01670 at 318.034 kb on + strand, within A4249_RS01670 at 318.035 kb on - strand, within A4249_RS01670 at 318.111 kb on - strand, within A4249_RS01670 at 318.115 kb on + strand, within A4249_RS01670 at 318.115 kb on + strand, within A4249_RS01670 at 318.115 kb on + strand, within A4249_RS01670 at 318.115 kb on + strand, within A4249_RS01670 at 318.116 kb on - strand, within A4249_RS01670 at 318.116 kb on - strand, within A4249_RS01670 at 318.116 kb on - strand, within A4249_RS01670 at 318.388 kb on + strand, within A4249_RS01670 at 318.487 kb on + strand, within A4249_RS01670 at 318.488 kb on - strand, within A4249_RS01670 at 319.340 kb on + strand at 319.340 kb on + strand at 319.340 kb on + strand at 319.340 kb on + strand at 319.340 kb on + strand at 319.340 kb on + strand at 319.340 kb on + strand at 319.340 kb on + strand at 319.340 kb on + strand at 319.341 kb on - strand at 319.341 kb on - strand at 319.341 kb on - strand at 319.341 kb on - strand at 319.341 kb on - strand at 319.341 kb on - strand at 319.577 kb on + strand, within A4249_RS01675 at 319.578 kb on - strand, within A4249_RS01675 at 319.578 kb on - strand, within A4249_RS01675 at 319.578 kb on - strand, within A4249_RS01675 at 319.578 kb on - strand, within A4249_RS01675 at 319.637 kb on - strand, within A4249_RS01675 at 319.654 kb on - strand, within A4249_RS01675 at 319.802 kb on + strand at 319.899 kb on + strand, within A4249_RS01680 at 319.899 kb on + strand, within A4249_RS01680 at 319.899 kb on + strand, within A4249_RS01680 at 319.899 kb on + strand, within A4249_RS01680 at 319.899 kb on + strand, within A4249_RS01680 at 319.899 kb on + strand, within A4249_RS01680 at 319.899 kb on + strand, within A4249_RS01680 at 319.900 kb on - strand, within A4249_RS01680 at 319.900 kb on - strand, within A4249_RS01680 at 319.900 kb on - strand, within A4249_RS01680 at 319.900 kb on - strand, within A4249_RS01680 at 319.900 kb on - strand, within A4249_RS01680 at 319.900 kb on - strand, within A4249_RS01680 at 319.900 kb on - strand, within A4249_RS01680 at 319.900 kb on - strand, within A4249_RS01680 at 319.900 kb on - strand, within A4249_RS01680 at 320.209 kb on + strand, within A4249_RS01680 at 320.209 kb on + strand, within A4249_RS01680 at 320.209 kb on + strand, within A4249_RS01680 at 320.209 kb on + strand, within A4249_RS01680 at 320.209 kb on + strand, within A4249_RS01680 at 320.209 kb on + strand, within A4249_RS01680 at 320.209 kb on + strand, within A4249_RS01680 at 320.210 kb on - strand, within A4249_RS01680 at 320.210 kb on - strand, within A4249_RS01680 at 320.210 kb on - strand, within A4249_RS01680
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C) remove 316,845 - +1.1 317,438 + +0.4 317,438 + +0.1 317,438 + -0.7 317,438 + +0.2 317,439 - -0.6 317,439 - +0.9 317,456 + +0.1 317,456 + +0.2 317,456 + +0.0 317,457 - -0.1 317,457 - +1.3 317,790 - A4249_RS01670 0.18 -0.1 317,986 + A4249_RS01670 0.29 +0.8 317,987 - A4249_RS01670 0.29 -0.1 318,034 + A4249_RS01670 0.31 -0.3 318,035 - A4249_RS01670 0.31 -0.5 318,111 - A4249_RS01670 0.35 -2.0 318,115 + A4249_RS01670 0.35 +0.3 318,115 + A4249_RS01670 0.35 +0.5 318,115 + A4249_RS01670 0.35 -1.1 318,115 + A4249_RS01670 0.35 +1.1 318,116 - A4249_RS01670 0.36 -0.3 318,116 - A4249_RS01670 0.36 -0.9 318,116 - A4249_RS01670 0.36 +1.7 318,388 + A4249_RS01670 0.50 +1.3 318,487 + A4249_RS01670 0.55 -0.1 318,488 - A4249_RS01670 0.55 +0.1 319,340 + +0.1 319,340 + +0.3 319,340 + -0.2 319,340 + -0.9 319,340 + +1.3 319,340 + -0.7 319,340 + +0.4 319,340 + -0.5 319,340 + -0.3 319,341 - -0.2 319,341 - +1.3 319,341 - -0.6 319,341 - -0.3 319,341 - +0.4 319,341 - -0.2 319,577 + A4249_RS01675 0.52 +0.1 319,578 - A4249_RS01675 0.52 +0.3 319,578 - A4249_RS01675 0.52 +0.1 319,578 - A4249_RS01675 0.52 -1.8 319,578 - A4249_RS01675 0.52 +0.1 319,637 - A4249_RS01675 0.65 +0.4 319,654 - A4249_RS01675 0.69 +0.2 319,802 + +1.0 319,899 + A4249_RS01680 0.18 -0.0 319,899 + A4249_RS01680 0.18 +1.2 319,899 + A4249_RS01680 0.18 -1.8 319,899 + A4249_RS01680 0.18 +1.3 319,899 + A4249_RS01680 0.18 -0.2 319,899 + A4249_RS01680 0.18 -0.3 319,899 + A4249_RS01680 0.18 -0.4 319,900 - A4249_RS01680 0.18 -0.2 319,900 - A4249_RS01680 0.18 +0.2 319,900 - A4249_RS01680 0.18 +1.0 319,900 - A4249_RS01680 0.18 -0.0 319,900 - A4249_RS01680 0.18 +0.5 319,900 - A4249_RS01680 0.18 -1.2 319,900 - A4249_RS01680 0.18 +0.7 319,900 - A4249_RS01680 0.18 -0.5 319,900 - A4249_RS01680 0.18 -1.0 320,209 + A4249_RS01680 0.69 +0.6 320,209 + A4249_RS01680 0.69 +0.4 320,209 + A4249_RS01680 0.69 +0.6 320,209 + A4249_RS01680 0.69 -0.2 320,209 + A4249_RS01680 0.69 -1.2 320,209 + A4249_RS01680 0.69 -0.2 320,209 + A4249_RS01680 0.69 +0.8 320,210 - A4249_RS01680 0.69 +0.7 320,210 - A4249_RS01680 0.69 +0.1 320,210 - A4249_RS01680 0.69 +0.4
Or see this region's nucleotide sequence