Experiment: Adenine 0.74 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS01585 and A4249_RS01590 are separated by 210 nucleotides A4249_RS01590 and A4249_RS01595 are separated by 193 nucleotides A4249_RS01595 and A4249_RS16715 are separated by 7 nucleotides A4249_RS16715 and A4249_RS01600 are separated by 50 nucleotides
A4249_RS01585: A4249_RS01585 - glycosyltransferase family 4 protein, at 299,551 to 300,663
_RS01585
A4249_RS01590: A4249_RS01590 - site-specific DNA-methyltransferase, at 300,874 to 301,965
_RS01590
A4249_RS01595: A4249_RS01595 - hypothetical protein, at 302,159 to 302,362
_RS01595
A4249_RS16715: A4249_RS16715 - hypothetical protein, at 302,370 to 302,546
_RS16715
A4249_RS01600: A4249_RS01600 - HlyD family secretion protein, at 302,597 to 303,712
_RS01600
Position (kb) 300
301
302 Strain fitness (log2 ratio) -2
-1
0
1
2 at 300.143 kb on + strand, within A4249_RS01585 at 300.143 kb on + strand, within A4249_RS01585 at 300.143 kb on + strand, within A4249_RS01585 at 300.143 kb on + strand, within A4249_RS01585 at 300.143 kb on + strand, within A4249_RS01585 at 300.143 kb on + strand, within A4249_RS01585 at 300.144 kb on - strand, within A4249_RS01585 at 300.144 kb on - strand, within A4249_RS01585 at 300.144 kb on - strand, within A4249_RS01585 at 300.144 kb on - strand, within A4249_RS01585 at 300.170 kb on + strand, within A4249_RS01585 at 300.170 kb on + strand, within A4249_RS01585 at 300.170 kb on + strand, within A4249_RS01585 at 300.170 kb on + strand, within A4249_RS01585 at 300.170 kb on + strand, within A4249_RS01585 at 300.170 kb on + strand, within A4249_RS01585 at 300.170 kb on + strand, within A4249_RS01585 at 300.170 kb on + strand, within A4249_RS01585 at 300.170 kb on + strand, within A4249_RS01585 at 300.170 kb on + strand, within A4249_RS01585 at 300.170 kb on + strand, within A4249_RS01585 at 300.170 kb on + strand, within A4249_RS01585 at 300.170 kb on + strand, within A4249_RS01585 at 300.171 kb on - strand, within A4249_RS01585 at 300.171 kb on - strand, within A4249_RS01585 at 300.171 kb on - strand, within A4249_RS01585 at 300.171 kb on - strand, within A4249_RS01585 at 300.171 kb on - strand, within A4249_RS01585 at 300.171 kb on - strand, within A4249_RS01585 at 300.171 kb on - strand, within A4249_RS01585 at 300.171 kb on - strand, within A4249_RS01585 at 300.171 kb on - strand, within A4249_RS01585 at 300.171 kb on - strand, within A4249_RS01585 at 300.171 kb on - strand, within A4249_RS01585 at 300.171 kb on - strand, within A4249_RS01585 at 300.281 kb on + strand, within A4249_RS01585 at 300.281 kb on + strand, within A4249_RS01585 at 300.281 kb on + strand, within A4249_RS01585 at 300.281 kb on + strand, within A4249_RS01585 at 300.281 kb on + strand, within A4249_RS01585 at 300.281 kb on + strand, within A4249_RS01585 at 300.282 kb on - strand, within A4249_RS01585 at 300.282 kb on - strand, within A4249_RS01585 at 300.282 kb on - strand, within A4249_RS01585 at 300.344 kb on + strand, within A4249_RS01585 at 300.344 kb on + strand, within A4249_RS01585 at 300.344 kb on + strand, within A4249_RS01585 at 300.344 kb on + strand, within A4249_RS01585 at 300.344 kb on + strand, within A4249_RS01585 at 300.345 kb on - strand, within A4249_RS01585 at 300.345 kb on - strand, within A4249_RS01585 at 300.345 kb on - strand, within A4249_RS01585 at 300.345 kb on - strand, within A4249_RS01585 at 300.611 kb on + strand at 300.611 kb on + strand at 300.612 kb on - strand at 300.612 kb on - strand at 300.612 kb on - strand at 300.612 kb on - strand at 300.635 kb on + strand at 300.635 kb on + strand at 300.635 kb on + strand at 300.635 kb on + strand at 300.635 kb on + strand at 300.635 kb on + strand at 300.635 kb on + strand at 300.635 kb on + strand at 300.635 kb on + strand at 300.635 kb on + strand at 300.636 kb on - strand at 300.636 kb on - strand at 300.636 kb on - strand at 300.636 kb on - strand at 300.636 kb on - strand at 300.744 kb on + strand at 300.808 kb on - strand at 300.808 kb on - strand at 300.832 kb on + strand at 300.833 kb on - strand at 300.833 kb on - strand at 300.850 kb on + strand at 300.850 kb on + strand at 300.850 kb on + strand at 300.947 kb on + strand at 300.947 kb on + strand at 300.947 kb on + strand at 301.077 kb on - strand, within A4249_RS01590 at 301.224 kb on - strand, within A4249_RS01590 at 301.250 kb on + strand, within A4249_RS01590 at 301.251 kb on - strand, within A4249_RS01590 at 301.491 kb on - strand, within A4249_RS01590 at 301.491 kb on - strand, within A4249_RS01590 at 301.752 kb on - strand, within A4249_RS01590 at 301.847 kb on + strand, within A4249_RS01590 at 302.016 kb on - strand at 302.016 kb on - strand at 302.026 kb on - strand at 302.120 kb on + strand at 302.120 kb on + strand at 302.120 kb on + strand at 302.120 kb on + strand at 302.120 kb on + strand at 302.120 kb on + strand at 302.121 kb on - strand at 302.121 kb on - strand at 302.121 kb on - strand at 302.121 kb on - strand at 302.121 kb on - strand at 302.121 kb on - strand at 302.182 kb on + strand, within A4249_RS01595 at 302.182 kb on + strand, within A4249_RS01595 at 302.182 kb on + strand, within A4249_RS01595 at 302.182 kb on + strand, within A4249_RS01595 at 302.183 kb on - strand, within A4249_RS01595 at 302.183 kb on - strand, within A4249_RS01595 at 302.183 kb on - strand, within A4249_RS01595 at 302.183 kb on - strand, within A4249_RS01595 at 302.183 kb on - strand, within A4249_RS01595 at 302.183 kb on - strand, within A4249_RS01595 at 302.183 kb on - strand, within A4249_RS01595 at 302.183 kb on - strand, within A4249_RS01595 at 302.183 kb on - strand, within A4249_RS01595 at 302.248 kb on + strand, within A4249_RS01595 at 302.248 kb on + strand, within A4249_RS01595 at 302.248 kb on + strand, within A4249_RS01595 at 302.248 kb on + strand, within A4249_RS01595 at 302.249 kb on - strand, within A4249_RS01595 at 302.249 kb on - strand, within A4249_RS01595 at 302.249 kb on - strand, within A4249_RS01595 at 302.249 kb on - strand, within A4249_RS01595 at 302.249 kb on - strand, within A4249_RS01595 at 302.249 kb on - strand, within A4249_RS01595 at 302.249 kb on - strand, within A4249_RS01595 at 302.558 kb on + strand at 302.559 kb on - strand at 302.559 kb on - strand at 302.570 kb on + strand at 302.570 kb on + strand at 302.571 kb on - strand at 302.608 kb on + strand at 302.608 kb on + strand at 302.609 kb on - strand at 302.609 kb on - strand at 302.872 kb on + strand, within A4249_RS01600 at 302.872 kb on + strand, within A4249_RS01600 at 302.872 kb on + strand, within A4249_RS01600 at 302.873 kb on - strand, within A4249_RS01600 at 302.873 kb on - strand, within A4249_RS01600 at 302.873 kb on - strand, within A4249_RS01600 at 302.873 kb on - strand, within A4249_RS01600 at 302.934 kb on + strand, within A4249_RS01600 at 302.934 kb on + strand, within A4249_RS01600 at 302.934 kb on + strand, within A4249_RS01600 at 302.934 kb on + strand, within A4249_RS01600 at 302.934 kb on + strand, within A4249_RS01600 at 302.934 kb on + strand, within A4249_RS01600 at 302.934 kb on + strand, within A4249_RS01600 at 302.934 kb on + strand, within A4249_RS01600 at 302.934 kb on + strand, within A4249_RS01600 at 302.935 kb on - strand, within A4249_RS01600 at 302.935 kb on - strand, within A4249_RS01600 at 302.935 kb on - strand, within A4249_RS01600 at 302.935 kb on - strand, within A4249_RS01600 at 302.935 kb on - strand, within A4249_RS01600 at 302.935 kb on - strand, within A4249_RS01600 at 302.935 kb on - strand, within A4249_RS01600 at 302.935 kb on - strand, within A4249_RS01600 at 302.935 kb on - strand, within A4249_RS01600 at 302.935 kb on - strand, within A4249_RS01600
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C) remove 300,143 + A4249_RS01585 0.53 -0.5 300,143 + A4249_RS01585 0.53 -0.1 300,143 + A4249_RS01585 0.53 -0.2 300,143 + A4249_RS01585 0.53 -0.1 300,143 + A4249_RS01585 0.53 -0.0 300,143 + A4249_RS01585 0.53 +0.2 300,144 - A4249_RS01585 0.53 +0.1 300,144 - A4249_RS01585 0.53 -0.4 300,144 - A4249_RS01585 0.53 +0.3 300,144 - A4249_RS01585 0.53 +0.7 300,170 + A4249_RS01585 0.56 +0.0 300,170 + A4249_RS01585 0.56 +0.8 300,170 + A4249_RS01585 0.56 -0.1 300,170 + A4249_RS01585 0.56 -0.3 300,170 + A4249_RS01585 0.56 -1.2 300,170 + A4249_RS01585 0.56 +0.3 300,170 + A4249_RS01585 0.56 +0.2 300,170 + A4249_RS01585 0.56 -0.1 300,170 + A4249_RS01585 0.56 +0.2 300,170 + A4249_RS01585 0.56 +0.1 300,170 + A4249_RS01585 0.56 -0.7 300,170 + A4249_RS01585 0.56 -0.0 300,170 + A4249_RS01585 0.56 -0.1 300,171 - A4249_RS01585 0.56 -0.4 300,171 - A4249_RS01585 0.56 -0.4 300,171 - A4249_RS01585 0.56 -0.2 300,171 - A4249_RS01585 0.56 -0.4 300,171 - A4249_RS01585 0.56 -0.5 300,171 - A4249_RS01585 0.56 -0.2 300,171 - A4249_RS01585 0.56 -0.5 300,171 - A4249_RS01585 0.56 -0.1 300,171 - A4249_RS01585 0.56 +0.4 300,171 - A4249_RS01585 0.56 -0.3 300,171 - A4249_RS01585 0.56 +0.1 300,171 - A4249_RS01585 0.56 -0.2 300,281 + A4249_RS01585 0.66 -0.4 300,281 + A4249_RS01585 0.66 -0.3 300,281 + A4249_RS01585 0.66 +0.6 300,281 + A4249_RS01585 0.66 -0.5 300,281 + A4249_RS01585 0.66 +0.5 300,281 + A4249_RS01585 0.66 -0.3 300,282 - A4249_RS01585 0.66 +0.5 300,282 - A4249_RS01585 0.66 -0.2 300,282 - A4249_RS01585 0.66 -0.3 300,344 + A4249_RS01585 0.71 -0.2 300,344 + A4249_RS01585 0.71 -0.0 300,344 + A4249_RS01585 0.71 -0.5 300,344 + A4249_RS01585 0.71 -0.2 300,344 + A4249_RS01585 0.71 -0.5 300,345 - A4249_RS01585 0.71 -0.8 300,345 - A4249_RS01585 0.71 -0.3 300,345 - A4249_RS01585 0.71 +1.0 300,345 - A4249_RS01585 0.71 -0.1 300,611 + -0.1 300,611 + -0.3 300,612 - -0.1 300,612 - +0.1 300,612 - -0.1 300,612 - -0.2 300,635 + +0.0 300,635 + -0.1 300,635 + +0.8 300,635 + +0.3 300,635 + +0.6 300,635 + -0.2 300,635 + +0.3 300,635 + -0.2 300,635 + -0.2 300,635 + -0.6 300,636 - -0.1 300,636 - -0.1 300,636 - +0.1 300,636 - -0.1 300,636 - -0.6 300,744 + -0.0 300,808 - +0.3 300,808 - +0.3 300,832 + +0.3 300,833 - -1.2 300,833 - +0.1 300,850 + +0.8 300,850 + +0.1 300,850 + -0.0 300,947 + -0.2 300,947 + -1.5 300,947 + -0.5 301,077 - A4249_RS01590 0.19 -0.7 301,224 - A4249_RS01590 0.32 -0.5 301,250 + A4249_RS01590 0.34 -1.0 301,251 - A4249_RS01590 0.35 +1.4 301,491 - A4249_RS01590 0.57 -0.5 301,491 - A4249_RS01590 0.57 +0.3 301,752 - A4249_RS01590 0.80 +0.1 301,847 + A4249_RS01590 0.89 -0.9 302,016 - +0.1 302,016 - -0.2 302,026 - +0.8 302,120 + -0.1 302,120 + -0.5 302,120 + -1.4 302,120 + +1.2 302,120 + -0.3 302,120 + +0.1 302,121 - -0.1 302,121 - -0.3 302,121 - +1.0 302,121 - +0.2 302,121 - -0.6 302,121 - +0.2 302,182 + A4249_RS01595 0.11 +1.0 302,182 + A4249_RS01595 0.11 -0.2 302,182 + A4249_RS01595 0.11 -0.2 302,182 + A4249_RS01595 0.11 +0.5 302,183 - A4249_RS01595 0.12 +1.1 302,183 - A4249_RS01595 0.12 +0.1 302,183 - A4249_RS01595 0.12 +0.0 302,183 - A4249_RS01595 0.12 -0.3 302,183 - A4249_RS01595 0.12 +0.5 302,183 - A4249_RS01595 0.12 -0.3 302,183 - A4249_RS01595 0.12 +1.0 302,183 - A4249_RS01595 0.12 +0.3 302,183 - A4249_RS01595 0.12 +1.0 302,248 + A4249_RS01595 0.44 -0.6 302,248 + A4249_RS01595 0.44 -0.4 302,248 + A4249_RS01595 0.44 -0.1 302,248 + A4249_RS01595 0.44 -0.2 302,249 - A4249_RS01595 0.44 +0.0 302,249 - A4249_RS01595 0.44 +0.5 302,249 - A4249_RS01595 0.44 -0.0 302,249 - A4249_RS01595 0.44 -0.5 302,249 - A4249_RS01595 0.44 +0.4 302,249 - A4249_RS01595 0.44 +2.1 302,249 - A4249_RS01595 0.44 -0.2 302,558 + +0.1 302,559 - +0.5 302,559 - -0.4 302,570 + -0.3 302,570 + -2.5 302,571 - +0.1 302,608 + -1.5 302,608 + +1.7 302,609 - -0.5 302,609 - +0.5 302,872 + A4249_RS01600 0.25 -0.6 302,872 + A4249_RS01600 0.25 +0.8 302,872 + A4249_RS01600 0.25 +0.2 302,873 - A4249_RS01600 0.25 +0.1 302,873 - A4249_RS01600 0.25 -0.4 302,873 - A4249_RS01600 0.25 +0.0 302,873 - A4249_RS01600 0.25 +0.3 302,934 + A4249_RS01600 0.30 -0.3 302,934 + A4249_RS01600 0.30 -0.9 302,934 + A4249_RS01600 0.30 -0.8 302,934 + A4249_RS01600 0.30 -1.2 302,934 + A4249_RS01600 0.30 -0.2 302,934 + A4249_RS01600 0.30 -0.7 302,934 + A4249_RS01600 0.30 +0.1 302,934 + A4249_RS01600 0.30 +0.0 302,934 + A4249_RS01600 0.30 +0.1 302,935 - A4249_RS01600 0.30 -0.3 302,935 - A4249_RS01600 0.30 +0.2 302,935 - A4249_RS01600 0.30 -0.2 302,935 - A4249_RS01600 0.30 +1.0 302,935 - A4249_RS01600 0.30 -0.5 302,935 - A4249_RS01600 0.30 +0.4 302,935 - A4249_RS01600 0.30 +0.3 302,935 - A4249_RS01600 0.30 -0.5 302,935 - A4249_RS01600 0.30 -0.4 302,935 - A4249_RS01600 0.30 -1.3
Or see this region's nucleotide sequence