Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS01050

Experiment: Adenine 0.74 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS01045 and A4249_RS01050 are separated by 10 nucleotidesA4249_RS01050 and A4249_RS01055 overlap by 11 nucleotides A4249_RS01045: A4249_RS01045 - osmoprotectant NAGGN system M42 family peptidase, at 199,946 to 201,070 _RS01045 A4249_RS01050: A4249_RS01050 - N-acetylglutaminylglutamine synthetase, at 201,081 to 202,850 _RS01050 A4249_RS01055: A4249_RS01055 - N-acetylglutaminylglutamine amidotransferase, at 202,840 to 204,615 _RS01055 Position (kb) 201 202 203Strain fitness (log2 ratio) -2 -1 0 1at 200.094 kb on + strand, within A4249_RS01045at 200.181 kb on + strand, within A4249_RS01045at 200.181 kb on + strand, within A4249_RS01045at 200.181 kb on + strand, within A4249_RS01045at 200.181 kb on + strand, within A4249_RS01045at 200.182 kb on - strand, within A4249_RS01045at 200.182 kb on - strand, within A4249_RS01045at 200.182 kb on - strand, within A4249_RS01045at 200.184 kb on + strand, within A4249_RS01045at 200.184 kb on + strand, within A4249_RS01045at 200.533 kb on + strand, within A4249_RS01045at 200.686 kb on + strand, within A4249_RS01045at 200.686 kb on + strand, within A4249_RS01045at 200.686 kb on + strand, within A4249_RS01045at 200.687 kb on - strand, within A4249_RS01045at 200.887 kb on + strand, within A4249_RS01045at 200.888 kb on - strand, within A4249_RS01045at 200.934 kb on + strand, within A4249_RS01045at 200.969 kb on + strandat 200.989 kb on + strandat 200.989 kb on + strandat 200.989 kb on + strandat 200.989 kb on + strandat 200.989 kb on + strandat 200.990 kb on - strandat 200.990 kb on - strandat 200.990 kb on - strandat 200.990 kb on - strandat 200.990 kb on - strandat 200.990 kb on - strandat 200.990 kb on - strandat 200.990 kb on - strandat 200.991 kb on + strandat 201.042 kb on + strandat 201.042 kb on + strandat 201.043 kb on - strandat 201.043 kb on - strandat 201.043 kb on - strandat 201.043 kb on - strandat 201.043 kb on - strandat 201.043 kb on - strandat 201.053 kb on + strandat 201.144 kb on + strandat 201.144 kb on + strandat 201.144 kb on + strandat 201.145 kb on - strandat 201.145 kb on - strandat 201.145 kb on - strandat 201.217 kb on + strandat 201.218 kb on - strandat 201.270 kb on - strand, within A4249_RS01050at 201.271 kb on + strand, within A4249_RS01050at 201.272 kb on - strand, within A4249_RS01050at 201.437 kb on + strand, within A4249_RS01050at 201.437 kb on + strand, within A4249_RS01050at 201.437 kb on + strand, within A4249_RS01050at 201.437 kb on + strand, within A4249_RS01050at 201.437 kb on + strand, within A4249_RS01050at 201.437 kb on + strand, within A4249_RS01050at 201.438 kb on - strand, within A4249_RS01050at 201.438 kb on - strand, within A4249_RS01050at 201.438 kb on - strand, within A4249_RS01050at 201.516 kb on - strand, within A4249_RS01050at 201.589 kb on + strand, within A4249_RS01050at 201.589 kb on + strand, within A4249_RS01050at 201.589 kb on + strand, within A4249_RS01050at 201.589 kb on + strand, within A4249_RS01050at 201.590 kb on - strand, within A4249_RS01050at 201.600 kb on + strand, within A4249_RS01050at 201.600 kb on + strand, within A4249_RS01050at 201.600 kb on + strand, within A4249_RS01050at 202.027 kb on + strand, within A4249_RS01050at 202.028 kb on - strand, within A4249_RS01050at 202.028 kb on - strand, within A4249_RS01050at 202.364 kb on + strand, within A4249_RS01050at 202.381 kb on + strand, within A4249_RS01050at 202.381 kb on + strand, within A4249_RS01050at 202.381 kb on + strand, within A4249_RS01050at 202.381 kb on + strand, within A4249_RS01050at 202.381 kb on + strand, within A4249_RS01050at 202.381 kb on + strand, within A4249_RS01050at 202.382 kb on - strand, within A4249_RS01050at 202.382 kb on - strand, within A4249_RS01050at 202.453 kb on + strand, within A4249_RS01050at 202.453 kb on + strand, within A4249_RS01050at 202.453 kb on + strand, within A4249_RS01050at 202.453 kb on + strand, within A4249_RS01050at 202.453 kb on + strand, within A4249_RS01050at 202.454 kb on - strand, within A4249_RS01050at 202.454 kb on - strand, within A4249_RS01050at 202.454 kb on - strand, within A4249_RS01050at 202.537 kb on + strand, within A4249_RS01050at 202.537 kb on + strand, within A4249_RS01050at 202.537 kb on + strand, within A4249_RS01050at 202.537 kb on + strand, within A4249_RS01050at 202.538 kb on - strand, within A4249_RS01050at 202.538 kb on - strand, within A4249_RS01050at 202.538 kb on - strand, within A4249_RS01050at 202.558 kb on + strand, within A4249_RS01050at 202.558 kb on + strand, within A4249_RS01050at 202.559 kb on - strand, within A4249_RS01050at 202.559 kb on - strand, within A4249_RS01050at 202.627 kb on + strand, within A4249_RS01050at 202.627 kb on + strand, within A4249_RS01050at 202.627 kb on + strand, within A4249_RS01050at 202.627 kb on + strand, within A4249_RS01050at 202.628 kb on - strand, within A4249_RS01050at 202.628 kb on - strand, within A4249_RS01050at 202.628 kb on - strand, within A4249_RS01050at 202.628 kb on - strand, within A4249_RS01050at 202.628 kb on - strand, within A4249_RS01050at 202.628 kb on - strand, within A4249_RS01050at 202.628 kb on - strand, within A4249_RS01050at 202.628 kb on - strand, within A4249_RS01050at 202.628 kb on - strand, within A4249_RS01050at 202.628 kb on - strand, within A4249_RS01050at 202.628 kb on - strand, within A4249_RS01050at 202.628 kb on - strand, within A4249_RS01050at 202.628 kb on - strand, within A4249_RS01050at 202.949 kb on + strandat 202.949 kb on + strandat 202.950 kb on - strandat 203.018 kb on + strand, within A4249_RS01055at 203.033 kb on + strand, within A4249_RS01055at 203.033 kb on + strand, within A4249_RS01055at 203.033 kb on + strand, within A4249_RS01055at 203.033 kb on + strand, within A4249_RS01055at 203.033 kb on + strand, within A4249_RS01055at 203.033 kb on + strand, within A4249_RS01055at 203.033 kb on + strand, within A4249_RS01055at 203.034 kb on - strand, within A4249_RS01055at 203.034 kb on - strand, within A4249_RS01055at 203.034 kb on - strand, within A4249_RS01055at 203.034 kb on - strand, within A4249_RS01055at 203.034 kb on - strand, within A4249_RS01055at 203.034 kb on - strand, within A4249_RS01055at 203.034 kb on - strand, within A4249_RS01055at 203.057 kb on + strand, within A4249_RS01055at 203.057 kb on + strand, within A4249_RS01055at 203.058 kb on - strand, within A4249_RS01055at 203.058 kb on - strand, within A4249_RS01055at 203.367 kb on + strand, within A4249_RS01055at 203.367 kb on + strand, within A4249_RS01055at 203.368 kb on - strand, within A4249_RS01055at 203.368 kb on - strand, within A4249_RS01055at 203.368 kb on - strand, within A4249_RS01055at 203.368 kb on - strand, within A4249_RS01055at 203.369 kb on + strand, within A4249_RS01055at 203.369 kb on + strand, within A4249_RS01055at 203.369 kb on + strand, within A4249_RS01055at 203.369 kb on + strand, within A4249_RS01055at 203.369 kb on + strand, within A4249_RS01055at 203.369 kb on + strand, within A4249_RS01055at 203.369 kb on + strand, within A4249_RS01055at 203.369 kb on + strand, within A4249_RS01055at 203.369 kb on + strand, within A4249_RS01055at 203.370 kb on - strand, within A4249_RS01055at 203.370 kb on - strand, within A4249_RS01055at 203.370 kb on - strand, within A4249_RS01055at 203.370 kb on - strand, within A4249_RS01055at 203.370 kb on - strand, within A4249_RS01055at 203.370 kb on - strand, within A4249_RS01055at 203.370 kb on - strand, within A4249_RS01055at 203.370 kb on - strand, within A4249_RS01055at 203.370 kb on - strand, within A4249_RS01055at 203.370 kb on - strand, within A4249_RS01055at 203.370 kb on - strand, within A4249_RS01055at 203.429 kb on + strand, within A4249_RS01055at 203.429 kb on + strand, within A4249_RS01055at 203.429 kb on + strand, within A4249_RS01055at 203.429 kb on + strand, within A4249_RS01055at 203.429 kb on + strand, within A4249_RS01055at 203.430 kb on - strand, within A4249_RS01055at 203.430 kb on - strand, within A4249_RS01055at 203.430 kb on - strand, within A4249_RS01055at 203.469 kb on - strand, within A4249_RS01055at 203.477 kb on + strand, within A4249_RS01055at 203.526 kb on + strand, within A4249_RS01055at 203.526 kb on + strand, within A4249_RS01055at 203.526 kb on + strand, within A4249_RS01055at 203.526 kb on + strand, within A4249_RS01055at 203.526 kb on + strand, within A4249_RS01055at 203.526 kb on + strand, within A4249_RS01055at 203.527 kb on - strand, within A4249_RS01055at 203.527 kb on - strand, within A4249_RS01055at 203.527 kb on - strand, within A4249_RS01055at 203.527 kb on - strand, within A4249_RS01055at 203.555 kb on + strand, within A4249_RS01055at 203.555 kb on + strand, within A4249_RS01055at 203.555 kb on + strand, within A4249_RS01055at 203.556 kb on - strand, within A4249_RS01055at 203.573 kb on + strand, within A4249_RS01055at 203.574 kb on - strand, within A4249_RS01055at 203.574 kb on - strand, within A4249_RS01055at 203.574 kb on - strand, within A4249_RS01055at 203.574 kb on - strand, within A4249_RS01055at 203.574 kb on - strand, within A4249_RS01055at 203.669 kb on + strand, within A4249_RS01055at 203.670 kb on - strand, within A4249_RS01055at 203.693 kb on + strand, within A4249_RS01055at 203.722 kb on - strand, within A4249_RS01055

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Per-strain Table

Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C)
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200,094 + A4249_RS01045 0.13 -0.3
200,181 + A4249_RS01045 0.21 -0.2
200,181 + A4249_RS01045 0.21 +0.4
200,181 + A4249_RS01045 0.21 -0.0
200,181 + A4249_RS01045 0.21 -0.7
200,182 - A4249_RS01045 0.21 -0.3
200,182 - A4249_RS01045 0.21 +0.1
200,182 - A4249_RS01045 0.21 -1.3
200,184 + A4249_RS01045 0.21 -1.4
200,184 + A4249_RS01045 0.21 +0.0
200,533 + A4249_RS01045 0.52 -0.4
200,686 + A4249_RS01045 0.66 +0.2
200,686 + A4249_RS01045 0.66 -1.9
200,686 + A4249_RS01045 0.66 +1.6
200,687 - A4249_RS01045 0.66 -0.2
200,887 + A4249_RS01045 0.84 -0.0
200,888 - A4249_RS01045 0.84 -0.2
200,934 + A4249_RS01045 0.88 +0.2
200,969 + -0.4
200,989 + -0.4
200,989 + +0.1
200,989 + -0.2
200,989 + -0.1
200,989 + -0.3
200,990 - +0.8
200,990 - -0.4
200,990 - +0.6
200,990 - -1.4
200,990 - -0.1
200,990 - +0.3
200,990 - -1.0
200,990 - +0.0
200,991 + +0.7
201,042 + +0.9
201,042 + -0.2
201,043 - +0.3
201,043 - +0.9
201,043 - +0.2
201,043 - +0.4
201,043 - +0.8
201,043 - +0.6
201,053 + +0.1
201,144 + +0.1
201,144 + -0.2
201,144 + -0.6
201,145 - +0.2
201,145 - -1.3
201,145 - +0.6
201,217 + -0.7
201,218 - +0.2
201,270 - A4249_RS01050 0.11 +1.4
201,271 + A4249_RS01050 0.11 -0.2
201,272 - A4249_RS01050 0.11 -0.1
201,437 + A4249_RS01050 0.20 +0.3
201,437 + A4249_RS01050 0.20 +0.3
201,437 + A4249_RS01050 0.20 -0.3
201,437 + A4249_RS01050 0.20 +1.3
201,437 + A4249_RS01050 0.20 +0.2
201,437 + A4249_RS01050 0.20 +0.3
201,438 - A4249_RS01050 0.20 +0.8
201,438 - A4249_RS01050 0.20 +0.1
201,438 - A4249_RS01050 0.20 -0.1
201,516 - A4249_RS01050 0.25 +0.9
201,589 + A4249_RS01050 0.29 +0.1
201,589 + A4249_RS01050 0.29 +0.4
201,589 + A4249_RS01050 0.29 -0.6
201,589 + A4249_RS01050 0.29 +0.4
201,590 - A4249_RS01050 0.29 +0.6
201,600 + A4249_RS01050 0.29 +0.7
201,600 + A4249_RS01050 0.29 +0.2
201,600 + A4249_RS01050 0.29 +1.3
202,027 + A4249_RS01050 0.53 -0.9
202,028 - A4249_RS01050 0.54 +0.1
202,028 - A4249_RS01050 0.54 +0.2
202,364 + A4249_RS01050 0.72 -1.4
202,381 + A4249_RS01050 0.73 -0.4
202,381 + A4249_RS01050 0.73 -0.1
202,381 + A4249_RS01050 0.73 -0.3
202,381 + A4249_RS01050 0.73 -0.1
202,381 + A4249_RS01050 0.73 +0.0
202,381 + A4249_RS01050 0.73 -0.0
202,382 - A4249_RS01050 0.74 -0.1
202,382 - A4249_RS01050 0.74 -0.9
202,453 + A4249_RS01050 0.78 -1.3
202,453 + A4249_RS01050 0.78 +0.9
202,453 + A4249_RS01050 0.78 -0.5
202,453 + A4249_RS01050 0.78 -0.4
202,453 + A4249_RS01050 0.78 -0.1
202,454 - A4249_RS01050 0.78 -0.6
202,454 - A4249_RS01050 0.78 +0.6
202,454 - A4249_RS01050 0.78 +0.4
202,537 + A4249_RS01050 0.82 -0.9
202,537 + A4249_RS01050 0.82 +0.5
202,537 + A4249_RS01050 0.82 -0.3
202,537 + A4249_RS01050 0.82 +0.2
202,538 - A4249_RS01050 0.82 -1.4
202,538 - A4249_RS01050 0.82 +0.2
202,538 - A4249_RS01050 0.82 -1.3
202,558 + A4249_RS01050 0.83 -0.3
202,558 + A4249_RS01050 0.83 +0.4
202,559 - A4249_RS01050 0.84 +0.3
202,559 - A4249_RS01050 0.84 +0.1
202,627 + A4249_RS01050 0.87 +0.2
202,627 + A4249_RS01050 0.87 +1.2
202,627 + A4249_RS01050 0.87 -2.1
202,627 + A4249_RS01050 0.87 +0.2
202,628 - A4249_RS01050 0.87 -1.0
202,628 - A4249_RS01050 0.87 -2.4
202,628 - A4249_RS01050 0.87 -0.8
202,628 - A4249_RS01050 0.87 +0.8
202,628 - A4249_RS01050 0.87 +1.0
202,628 - A4249_RS01050 0.87 -0.6
202,628 - A4249_RS01050 0.87 +0.5
202,628 - A4249_RS01050 0.87 +0.9
202,628 - A4249_RS01050 0.87 +0.1
202,628 - A4249_RS01050 0.87 -0.3
202,628 - A4249_RS01050 0.87 +0.1
202,628 - A4249_RS01050 0.87 +1.1
202,628 - A4249_RS01050 0.87 -0.1
202,949 + -0.1
202,949 + +0.0
202,950 - +0.0
203,018 + A4249_RS01055 0.10 +0.8
203,033 + A4249_RS01055 0.11 -0.3
203,033 + A4249_RS01055 0.11 -0.2
203,033 + A4249_RS01055 0.11 +0.1
203,033 + A4249_RS01055 0.11 -0.6
203,033 + A4249_RS01055 0.11 +1.4
203,033 + A4249_RS01055 0.11 -0.1
203,033 + A4249_RS01055 0.11 -0.5
203,034 - A4249_RS01055 0.11 -0.1
203,034 - A4249_RS01055 0.11 -0.6
203,034 - A4249_RS01055 0.11 -0.2
203,034 - A4249_RS01055 0.11 -0.0
203,034 - A4249_RS01055 0.11 +1.0
203,034 - A4249_RS01055 0.11 -0.0
203,034 - A4249_RS01055 0.11 +0.1
203,057 + A4249_RS01055 0.12 -0.2
203,057 + A4249_RS01055 0.12 +0.1
203,058 - A4249_RS01055 0.12 +0.6
203,058 - A4249_RS01055 0.12 -1.7
203,367 + A4249_RS01055 0.30 +0.8
203,367 + A4249_RS01055 0.30 +0.1
203,368 - A4249_RS01055 0.30 -0.4
203,368 - A4249_RS01055 0.30 -0.9
203,368 - A4249_RS01055 0.30 +0.2
203,368 - A4249_RS01055 0.30 -0.3
203,369 + A4249_RS01055 0.30 +0.1
203,369 + A4249_RS01055 0.30 -2.0
203,369 + A4249_RS01055 0.30 -0.1
203,369 + A4249_RS01055 0.30 -1.6
203,369 + A4249_RS01055 0.30 +0.8
203,369 + A4249_RS01055 0.30 -1.6
203,369 + A4249_RS01055 0.30 +0.7
203,369 + A4249_RS01055 0.30 +0.1
203,369 + A4249_RS01055 0.30 +0.5
203,370 - A4249_RS01055 0.30 -0.2
203,370 - A4249_RS01055 0.30 +1.4
203,370 - A4249_RS01055 0.30 +0.6
203,370 - A4249_RS01055 0.30 -0.7
203,370 - A4249_RS01055 0.30 -0.0
203,370 - A4249_RS01055 0.30 -0.4
203,370 - A4249_RS01055 0.30 -0.6
203,370 - A4249_RS01055 0.30 -0.9
203,370 - A4249_RS01055 0.30 +0.4
203,370 - A4249_RS01055 0.30 +0.7
203,370 - A4249_RS01055 0.30 +1.1
203,429 + A4249_RS01055 0.33 +0.2
203,429 + A4249_RS01055 0.33 -0.3
203,429 + A4249_RS01055 0.33 -0.1
203,429 + A4249_RS01055 0.33 +0.1
203,429 + A4249_RS01055 0.33 +0.4
203,430 - A4249_RS01055 0.33 +0.1
203,430 - A4249_RS01055 0.33 +0.8
203,430 - A4249_RS01055 0.33 -1.2
203,469 - A4249_RS01055 0.35 -0.3
203,477 + A4249_RS01055 0.36 -0.3
203,526 + A4249_RS01055 0.39 +0.4
203,526 + A4249_RS01055 0.39 +0.1
203,526 + A4249_RS01055 0.39 -0.6
203,526 + A4249_RS01055 0.39 -0.4
203,526 + A4249_RS01055 0.39 -0.1
203,526 + A4249_RS01055 0.39 -0.9
203,527 - A4249_RS01055 0.39 +0.3
203,527 - A4249_RS01055 0.39 -0.2
203,527 - A4249_RS01055 0.39 -0.5
203,527 - A4249_RS01055 0.39 +0.1
203,555 + A4249_RS01055 0.40 +0.3
203,555 + A4249_RS01055 0.40 +0.2
203,555 + A4249_RS01055 0.40 -0.2
203,556 - A4249_RS01055 0.40 -0.2
203,573 + A4249_RS01055 0.41 +0.6
203,574 - A4249_RS01055 0.41 -0.2
203,574 - A4249_RS01055 0.41 +0.3
203,574 - A4249_RS01055 0.41 -0.3
203,574 - A4249_RS01055 0.41 -0.8
203,574 - A4249_RS01055 0.41 +0.0
203,669 + A4249_RS01055 0.47 -0.6
203,670 - A4249_RS01055 0.47 -0.1
203,693 + A4249_RS01055 0.48 -1.9
203,722 - A4249_RS01055 0.50 -1.3

Or see this region's nucleotide sequence