Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS00695

Experiment: Adenine 0.74 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS00690 and A4249_RS00695 are separated by 5 nucleotidesA4249_RS00695 and A4249_RS00700 are separated by 147 nucleotidesA4249_RS00700 and A4249_RS00705 are separated by 54 nucleotides A4249_RS00690: A4249_RS00690 - mitochondrial fission ELM1 family protein, at 127,700 to 128,680 _RS00690 A4249_RS00695: A4249_RS00695 - transcription elongation factor GreA, at 128,686 to 129,159 _RS00695 A4249_RS00700: A4249_RS00700 - hypothetical protein, at 129,307 to 129,507 _RS00700 A4249_RS00705: A4249_RS00705 - glutathione S-transferase, at 129,562 to 130,227 _RS00705 Position (kb) 128 129 130Strain fitness (log2 ratio) -2 -1 0 1at 128.685 kb on - strandat 128.687 kb on + strandat 128.687 kb on + strandat 128.687 kb on + strandat 128.687 kb on + strandat 128.687 kb on + strandat 128.687 kb on + strandat 128.687 kb on + strandat 128.688 kb on - strandat 128.688 kb on - strandat 128.688 kb on - strandat 128.688 kb on - strandat 129.208 kb on + strandat 129.209 kb on - strandat 129.209 kb on - strandat 129.358 kb on + strand, within A4249_RS00700at 129.358 kb on + strand, within A4249_RS00700at 129.359 kb on - strand, within A4249_RS00700at 129.359 kb on - strand, within A4249_RS00700at 129.369 kb on - strand, within A4249_RS00700at 129.369 kb on - strand, within A4249_RS00700at 129.516 kb on - strandat 129.569 kb on + strandat 129.569 kb on + strandat 129.569 kb on + strandat 129.569 kb on + strandat 129.569 kb on + strandat 129.569 kb on + strandat 129.569 kb on + strandat 129.569 kb on + strandat 129.569 kb on + strandat 129.570 kb on - strandat 129.570 kb on - strandat 129.570 kb on - strandat 129.570 kb on - strandat 129.570 kb on - strandat 129.575 kb on + strandat 129.606 kb on - strandat 129.890 kb on - strand, within A4249_RS00705at 129.890 kb on - strand, within A4249_RS00705at 129.890 kb on - strand, within A4249_RS00705at 129.929 kb on + strand, within A4249_RS00705at 129.929 kb on + strand, within A4249_RS00705at 129.929 kb on + strand, within A4249_RS00705at 129.929 kb on + strand, within A4249_RS00705at 129.929 kb on + strand, within A4249_RS00705at 129.930 kb on - strand, within A4249_RS00705at 129.930 kb on - strand, within A4249_RS00705at 129.930 kb on - strand, within A4249_RS00705at 129.930 kb on - strand, within A4249_RS00705at 129.930 kb on - strand, within A4249_RS00705at 129.930 kb on - strand, within A4249_RS00705at 129.941 kb on + strand, within A4249_RS00705at 129.941 kb on + strand, within A4249_RS00705at 129.941 kb on + strand, within A4249_RS00705at 129.942 kb on - strand, within A4249_RS00705at 129.942 kb on - strand, within A4249_RS00705at 129.998 kb on + strand, within A4249_RS00705at 129.998 kb on + strand, within A4249_RS00705at 129.998 kb on + strand, within A4249_RS00705at 129.998 kb on + strand, within A4249_RS00705at 129.998 kb on + strand, within A4249_RS00705at 129.998 kb on + strand, within A4249_RS00705at 129.998 kb on + strand, within A4249_RS00705at 129.998 kb on + strand, within A4249_RS00705at 129.998 kb on + strand, within A4249_RS00705at 129.998 kb on + strand, within A4249_RS00705at 129.998 kb on + strand, within A4249_RS00705at 129.998 kb on + strand, within A4249_RS00705at 129.998 kb on + strand, within A4249_RS00705at 129.998 kb on + strand, within A4249_RS00705at 129.998 kb on + strand, within A4249_RS00705at 129.998 kb on + strand, within A4249_RS00705at 129.998 kb on + strand, within A4249_RS00705at 129.999 kb on - strand, within A4249_RS00705at 129.999 kb on - strand, within A4249_RS00705at 129.999 kb on - strand, within A4249_RS00705at 129.999 kb on - strand, within A4249_RS00705at 129.999 kb on - strand, within A4249_RS00705at 129.999 kb on - strand, within A4249_RS00705at 129.999 kb on - strand, within A4249_RS00705at 129.999 kb on - strand, within A4249_RS00705at 129.999 kb on - strand, within A4249_RS00705at 129.999 kb on - strand, within A4249_RS00705at 129.999 kb on - strand, within A4249_RS00705at 129.999 kb on - strand, within A4249_RS00705at 129.999 kb on - strand, within A4249_RS00705at 129.999 kb on - strand, within A4249_RS00705at 129.999 kb on - strand, within A4249_RS00705at 130.002 kb on + strand, within A4249_RS00705at 130.002 kb on + strand, within A4249_RS00705at 130.002 kb on + strand, within A4249_RS00705at 130.003 kb on - strand, within A4249_RS00705at 130.013 kb on + strand, within A4249_RS00705at 130.013 kb on + strand, within A4249_RS00705at 130.014 kb on - strand, within A4249_RS00705at 130.014 kb on - strand, within A4249_RS00705at 130.014 kb on - strand, within A4249_RS00705at 130.014 kb on - strand, within A4249_RS00705at 130.014 kb on - strand, within A4249_RS00705at 130.136 kb on + strand, within A4249_RS00705at 130.151 kb on + strand, within A4249_RS00705at 130.151 kb on + strand, within A4249_RS00705at 130.152 kb on - strand, within A4249_RS00705at 130.152 kb on - strand, within A4249_RS00705at 130.152 kb on - strand, within A4249_RS00705at 130.152 kb on - strand, within A4249_RS00705at 130.152 kb on - strand, within A4249_RS00705at 130.152 kb on - strand, within A4249_RS00705

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Per-strain Table

Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C)
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128,685 - -0.0
128,687 + +0.5
128,687 + -0.0
128,687 + +0.2
128,687 + +0.3
128,687 + -0.2
128,687 + -1.0
128,687 + -0.1
128,688 - +0.5
128,688 - -0.4
128,688 - +0.1
128,688 - -0.1
129,208 + -0.2
129,209 - +0.6
129,209 - -1.3
129,358 + A4249_RS00700 0.25 -0.7
129,358 + A4249_RS00700 0.25 +0.1
129,359 - A4249_RS00700 0.26 +0.4
129,359 - A4249_RS00700 0.26 -0.4
129,369 - A4249_RS00700 0.31 -0.4
129,369 - A4249_RS00700 0.31 -2.7
129,516 - -0.0
129,569 + -0.2
129,569 + -0.2
129,569 + +0.6
129,569 + +0.8
129,569 + +0.2
129,569 + +0.0
129,569 + +1.0
129,569 + +0.5
129,569 + -2.5
129,570 - +0.3
129,570 - +0.6
129,570 - +0.6
129,570 - +0.6
129,570 - +0.2
129,575 + +1.2
129,606 - +0.5
129,890 - A4249_RS00705 0.49 -0.5
129,890 - A4249_RS00705 0.49 +0.9
129,890 - A4249_RS00705 0.49 -0.0
129,929 + A4249_RS00705 0.55 +0.6
129,929 + A4249_RS00705 0.55 -2.6
129,929 + A4249_RS00705 0.55 +0.8
129,929 + A4249_RS00705 0.55 -0.1
129,929 + A4249_RS00705 0.55 +0.6
129,930 - A4249_RS00705 0.55 -1.4
129,930 - A4249_RS00705 0.55 -0.7
129,930 - A4249_RS00705 0.55 +0.4
129,930 - A4249_RS00705 0.55 -1.8
129,930 - A4249_RS00705 0.55 +0.3
129,930 - A4249_RS00705 0.55 +0.8
129,941 + A4249_RS00705 0.57 +0.9
129,941 + A4249_RS00705 0.57 +1.2
129,941 + A4249_RS00705 0.57 -1.8
129,942 - A4249_RS00705 0.57 -1.0
129,942 - A4249_RS00705 0.57 -1.1
129,998 + A4249_RS00705 0.65 -0.3
129,998 + A4249_RS00705 0.65 -0.0
129,998 + A4249_RS00705 0.65 -0.3
129,998 + A4249_RS00705 0.65 +0.4
129,998 + A4249_RS00705 0.65 -0.5
129,998 + A4249_RS00705 0.65 -0.8
129,998 + A4249_RS00705 0.65 -0.0
129,998 + A4249_RS00705 0.65 -0.8
129,998 + A4249_RS00705 0.65 -0.3
129,998 + A4249_RS00705 0.65 -1.4
129,998 + A4249_RS00705 0.65 +0.4
129,998 + A4249_RS00705 0.65 +0.1
129,998 + A4249_RS00705 0.65 -0.9
129,998 + A4249_RS00705 0.65 -0.9
129,998 + A4249_RS00705 0.65 -0.4
129,998 + A4249_RS00705 0.65 +0.2
129,998 + A4249_RS00705 0.65 +0.4
129,999 - A4249_RS00705 0.66 -0.3
129,999 - A4249_RS00705 0.66 +0.7
129,999 - A4249_RS00705 0.66 -0.1
129,999 - A4249_RS00705 0.66 -0.2
129,999 - A4249_RS00705 0.66 +0.3
129,999 - A4249_RS00705 0.66 -0.5
129,999 - A4249_RS00705 0.66 +0.1
129,999 - A4249_RS00705 0.66 -0.4
129,999 - A4249_RS00705 0.66 -0.3
129,999 - A4249_RS00705 0.66 -0.4
129,999 - A4249_RS00705 0.66 +0.6
129,999 - A4249_RS00705 0.66 -0.5
129,999 - A4249_RS00705 0.66 +1.3
129,999 - A4249_RS00705 0.66 +0.3
129,999 - A4249_RS00705 0.66 +1.4
130,002 + A4249_RS00705 0.66 +0.9
130,002 + A4249_RS00705 0.66 +0.2
130,002 + A4249_RS00705 0.66 +0.2
130,003 - A4249_RS00705 0.66 -1.5
130,013 + A4249_RS00705 0.68 +0.4
130,013 + A4249_RS00705 0.68 +0.1
130,014 - A4249_RS00705 0.68 -0.5
130,014 - A4249_RS00705 0.68 +0.4
130,014 - A4249_RS00705 0.68 -2.3
130,014 - A4249_RS00705 0.68 +0.1
130,014 - A4249_RS00705 0.68 -0.6
130,136 + A4249_RS00705 0.86 +0.6
130,151 + A4249_RS00705 0.88 -0.2
130,151 + A4249_RS00705 0.88 -1.7
130,152 - A4249_RS00705 0.89 -0.7
130,152 - A4249_RS00705 0.89 +1.1
130,152 - A4249_RS00705 0.89 +0.9
130,152 - A4249_RS00705 0.89 +0.4
130,152 - A4249_RS00705 0.89 -0.7
130,152 - A4249_RS00705 0.89 +0.7

Or see this region's nucleotide sequence