Experiment: Adenine 0.74 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS16430 and A4249_RS00545 are separated by 164 nucleotides A4249_RS00545 and A4249_RS16435 are separated by 109 nucleotides A4249_RS16435 and A4249_RS16440 overlap by 4 nucleotides
A4249_RS16430: A4249_RS16430 - hypothetical protein, at 91,265 to 91,825
_RS16430
A4249_RS00545: A4249_RS00545 - hypothetical protein, at 91,990 to 92,742
_RS00545
A4249_RS16435: A4249_RS16435 - hypothetical protein, at 92,852 to 93,358
_RS16435
A4249_RS16440: A4249_RS16440 - hypothetical protein, at 93,355 to 93,981
_RS16440
Position (kb) 91
92
93 Strain fitness (log2 ratio) -2
-1
0
1
2 at 90.997 kb on - strand at 91.021 kb on + strand at 91.136 kb on + strand at 91.136 kb on + strand at 91.136 kb on + strand at 91.136 kb on + strand at 91.136 kb on + strand at 91.136 kb on + strand at 91.137 kb on - strand at 91.137 kb on - strand at 91.137 kb on - strand at 91.137 kb on - strand at 91.137 kb on - strand at 91.137 kb on - strand at 91.156 kb on + strand at 91.156 kb on + strand at 91.156 kb on + strand at 91.156 kb on + strand at 91.156 kb on + strand at 91.157 kb on - strand at 91.157 kb on - strand at 91.157 kb on - strand at 91.157 kb on - strand at 91.236 kb on + strand at 91.488 kb on + strand, within A4249_RS16430 at 91.488 kb on + strand, within A4249_RS16430 at 91.488 kb on + strand, within A4249_RS16430 at 91.488 kb on + strand, within A4249_RS16430 at 91.489 kb on - strand, within A4249_RS16430 at 91.489 kb on - strand, within A4249_RS16430 at 91.489 kb on - strand, within A4249_RS16430 at 91.501 kb on + strand, within A4249_RS16430 at 91.501 kb on + strand, within A4249_RS16430 at 91.501 kb on + strand, within A4249_RS16430 at 91.502 kb on - strand, within A4249_RS16430 at 91.502 kb on - strand, within A4249_RS16430 at 91.502 kb on - strand, within A4249_RS16430 at 91.502 kb on - strand, within A4249_RS16430 at 91.615 kb on + strand, within A4249_RS16430 at 91.615 kb on + strand, within A4249_RS16430 at 91.616 kb on - strand, within A4249_RS16430 at 91.722 kb on + strand, within A4249_RS16430 at 91.722 kb on + strand, within A4249_RS16430 at 91.723 kb on - strand, within A4249_RS16430 at 91.723 kb on - strand, within A4249_RS16430 at 91.811 kb on + strand at 91.811 kb on + strand at 91.811 kb on + strand at 91.811 kb on + strand at 91.811 kb on + strand at 91.812 kb on - strand at 91.812 kb on - strand at 91.812 kb on - strand at 91.812 kb on - strand at 91.812 kb on - strand at 91.812 kb on - strand at 91.812 kb on - strand at 91.812 kb on - strand at 91.812 kb on - strand at 91.812 kb on - strand at 91.812 kb on - strand at 91.812 kb on - strand at 91.812 kb on - strand at 91.966 kb on + strand at 92.005 kb on + strand at 92.006 kb on - strand at 92.006 kb on - strand at 92.050 kb on + strand at 92.050 kb on + strand at 92.050 kb on + strand at 92.050 kb on + strand at 92.050 kb on + strand at 92.051 kb on - strand at 92.051 kb on - strand at 92.051 kb on - strand at 92.051 kb on - strand at 92.051 kb on - strand at 92.051 kb on - strand at 92.332 kb on + strand, within A4249_RS00545 at 92.332 kb on + strand, within A4249_RS00545 at 92.332 kb on + strand, within A4249_RS00545 at 92.333 kb on - strand, within A4249_RS00545 at 92.333 kb on - strand, within A4249_RS00545 at 92.497 kb on + strand, within A4249_RS00545 at 92.497 kb on + strand, within A4249_RS00545 at 92.498 kb on - strand, within A4249_RS00545 at 92.498 kb on - strand, within A4249_RS00545 at 92.498 kb on - strand, within A4249_RS00545 at 92.677 kb on + strand at 92.677 kb on + strand at 92.677 kb on + strand at 92.677 kb on + strand at 92.678 kb on - strand at 92.786 kb on - strand at 92.800 kb on - strand at 92.946 kb on + strand, within A4249_RS16435 at 93.002 kb on - strand, within A4249_RS16435 at 93.008 kb on + strand, within A4249_RS16435 at 93.008 kb on + strand, within A4249_RS16435 at 93.009 kb on - strand, within A4249_RS16435 at 93.009 kb on - strand, within A4249_RS16435 at 93.094 kb on + strand, within A4249_RS16435 at 93.094 kb on + strand, within A4249_RS16435 at 93.094 kb on + strand, within A4249_RS16435 at 93.094 kb on + strand, within A4249_RS16435 at 93.094 kb on + strand, within A4249_RS16435 at 93.094 kb on + strand, within A4249_RS16435 at 93.094 kb on + strand, within A4249_RS16435 at 93.094 kb on + strand, within A4249_RS16435 at 93.094 kb on + strand, within A4249_RS16435 at 93.095 kb on - strand, within A4249_RS16435 at 93.095 kb on - strand, within A4249_RS16435 at 93.095 kb on - strand, within A4249_RS16435 at 93.095 kb on - strand, within A4249_RS16435 at 93.095 kb on - strand, within A4249_RS16435 at 93.156 kb on + strand, within A4249_RS16435 at 93.172 kb on + strand, within A4249_RS16435 at 93.197 kb on - strand, within A4249_RS16435 at 93.249 kb on + strand, within A4249_RS16435 at 93.249 kb on + strand, within A4249_RS16435 at 93.249 kb on + strand, within A4249_RS16435 at 93.250 kb on - strand, within A4249_RS16435 at 93.250 kb on - strand, within A4249_RS16435 at 93.282 kb on + strand, within A4249_RS16435 at 93.282 kb on + strand, within A4249_RS16435 at 93.282 kb on + strand, within A4249_RS16435 at 93.282 kb on + strand, within A4249_RS16435 at 93.283 kb on - strand, within A4249_RS16435 at 93.283 kb on - strand, within A4249_RS16435 at 93.283 kb on - strand, within A4249_RS16435 at 93.283 kb on - strand, within A4249_RS16435 at 93.345 kb on - strand at 93.345 kb on - strand at 93.407 kb on - strand at 93.407 kb on - strand at 93.430 kb on + strand, within A4249_RS16440 at 93.430 kb on + strand, within A4249_RS16440 at 93.446 kb on + strand, within A4249_RS16440 at 93.447 kb on - strand, within A4249_RS16440 at 93.457 kb on - strand, within A4249_RS16440 at 93.505 kb on + strand, within A4249_RS16440 at 93.506 kb on - strand, within A4249_RS16440 at 93.506 kb on - strand, within A4249_RS16440 at 93.526 kb on + strand, within A4249_RS16440 at 93.526 kb on + strand, within A4249_RS16440 at 93.527 kb on - strand, within A4249_RS16440 at 93.617 kb on + strand, within A4249_RS16440 at 93.618 kb on - strand, within A4249_RS16440 at 93.618 kb on - strand, within A4249_RS16440 at 93.622 kb on - strand, within A4249_RS16440 at 93.622 kb on - strand, within A4249_RS16440 at 93.677 kb on - strand, within A4249_RS16440 at 93.678 kb on + strand, within A4249_RS16440 at 93.682 kb on + strand, within A4249_RS16440 at 93.730 kb on + strand, within A4249_RS16440 at 93.730 kb on + strand, within A4249_RS16440 at 93.730 kb on + strand, within A4249_RS16440 at 93.731 kb on - strand, within A4249_RS16440 at 93.738 kb on + strand, within A4249_RS16440 at 93.738 kb on + strand, within A4249_RS16440 at 93.738 kb on + strand, within A4249_RS16440 at 93.739 kb on - strand, within A4249_RS16440 at 93.739 kb on - strand, within A4249_RS16440 at 93.739 kb on - strand, within A4249_RS16440 at 93.739 kb on - strand, within A4249_RS16440 at 93.741 kb on + strand, within A4249_RS16440
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C) remove 90,997 - -0.4 91,021 + -0.4 91,136 + -0.8 91,136 + -1.9 91,136 + -1.1 91,136 + +0.9 91,136 + -0.2 91,136 + -0.7 91,137 - -0.1 91,137 - -0.9 91,137 - -0.4 91,137 - -0.2 91,137 - +1.2 91,137 - -1.3 91,156 + +0.4 91,156 + +0.5 91,156 + -0.1 91,156 + -1.3 91,156 + +0.6 91,157 - -1.1 91,157 - -0.7 91,157 - -0.4 91,157 - +0.0 91,236 + +1.3 91,488 + A4249_RS16430 0.40 -1.4 91,488 + A4249_RS16430 0.40 +0.7 91,488 + A4249_RS16430 0.40 +0.3 91,488 + A4249_RS16430 0.40 +0.2 91,489 - A4249_RS16430 0.40 -0.9 91,489 - A4249_RS16430 0.40 -0.6 91,489 - A4249_RS16430 0.40 -0.1 91,501 + A4249_RS16430 0.42 +0.6 91,501 + A4249_RS16430 0.42 +1.2 91,501 + A4249_RS16430 0.42 +0.0 91,502 - A4249_RS16430 0.42 +0.5 91,502 - A4249_RS16430 0.42 +0.3 91,502 - A4249_RS16430 0.42 -0.4 91,502 - A4249_RS16430 0.42 +0.4 91,615 + A4249_RS16430 0.62 -0.6 91,615 + A4249_RS16430 0.62 -0.0 91,616 - A4249_RS16430 0.63 +0.5 91,722 + A4249_RS16430 0.81 +0.7 91,722 + A4249_RS16430 0.81 +0.2 91,723 - A4249_RS16430 0.82 -0.6 91,723 - A4249_RS16430 0.82 +0.1 91,811 + +1.2 91,811 + +0.4 91,811 + +0.3 91,811 + -1.1 91,811 + +0.2 91,812 - -0.1 91,812 - -0.5 91,812 - -0.2 91,812 - -1.1 91,812 - -1.1 91,812 - +0.3 91,812 - +0.0 91,812 - -0.5 91,812 - +0.7 91,812 - +1.1 91,812 - -1.5 91,812 - +0.2 91,812 - +0.0 91,966 + -0.3 92,005 + +1.2 92,006 - -0.5 92,006 - +1.4 92,050 + -0.5 92,050 + -0.4 92,050 + -0.5 92,050 + +0.4 92,050 + +0.7 92,051 - +0.5 92,051 - +0.2 92,051 - +0.4 92,051 - +0.9 92,051 - -0.6 92,051 - +0.6 92,332 + A4249_RS00545 0.45 -0.5 92,332 + A4249_RS00545 0.45 +0.3 92,332 + A4249_RS00545 0.45 -0.3 92,333 - A4249_RS00545 0.46 -0.9 92,333 - A4249_RS00545 0.46 +1.7 92,497 + A4249_RS00545 0.67 +1.0 92,497 + A4249_RS00545 0.67 -0.5 92,498 - A4249_RS00545 0.67 -0.0 92,498 - A4249_RS00545 0.67 -0.3 92,498 - A4249_RS00545 0.67 +0.6 92,677 + -1.5 92,677 + -0.2 92,677 + -0.4 92,677 + +0.1 92,678 - +1.0 92,786 - -0.1 92,800 - +0.0 92,946 + A4249_RS16435 0.19 -0.4 93,002 - A4249_RS16435 0.30 +1.2 93,008 + A4249_RS16435 0.31 -0.6 93,008 + A4249_RS16435 0.31 -1.0 93,009 - A4249_RS16435 0.31 -0.2 93,009 - A4249_RS16435 0.31 +0.7 93,094 + A4249_RS16435 0.48 +0.3 93,094 + A4249_RS16435 0.48 -0.6 93,094 + A4249_RS16435 0.48 +0.3 93,094 + A4249_RS16435 0.48 -0.5 93,094 + A4249_RS16435 0.48 -0.4 93,094 + A4249_RS16435 0.48 +0.4 93,094 + A4249_RS16435 0.48 +0.2 93,094 + A4249_RS16435 0.48 +0.4 93,094 + A4249_RS16435 0.48 -0.8 93,095 - A4249_RS16435 0.48 +0.6 93,095 - A4249_RS16435 0.48 -0.1 93,095 - A4249_RS16435 0.48 -0.5 93,095 - A4249_RS16435 0.48 -0.4 93,095 - A4249_RS16435 0.48 +0.4 93,156 + A4249_RS16435 0.60 -0.4 93,172 + A4249_RS16435 0.63 +0.4 93,197 - A4249_RS16435 0.68 -0.0 93,249 + A4249_RS16435 0.78 -0.5 93,249 + A4249_RS16435 0.78 -0.2 93,249 + A4249_RS16435 0.78 +0.8 93,250 - A4249_RS16435 0.79 +0.1 93,250 - A4249_RS16435 0.79 +0.3 93,282 + A4249_RS16435 0.85 +0.2 93,282 + A4249_RS16435 0.85 -0.2 93,282 + A4249_RS16435 0.85 -0.4 93,282 + A4249_RS16435 0.85 -0.3 93,283 - A4249_RS16435 0.85 -1.7 93,283 - A4249_RS16435 0.85 +0.3 93,283 - A4249_RS16435 0.85 -0.2 93,283 - A4249_RS16435 0.85 +0.4 93,345 - +1.0 93,345 - -0.3 93,407 - +0.3 93,407 - +0.0 93,430 + A4249_RS16440 0.12 +2.4 93,430 + A4249_RS16440 0.12 +0.2 93,446 + A4249_RS16440 0.15 -0.6 93,447 - A4249_RS16440 0.15 +1.4 93,457 - A4249_RS16440 0.16 +0.3 93,505 + A4249_RS16440 0.24 +0.9 93,506 - A4249_RS16440 0.24 -0.3 93,506 - A4249_RS16440 0.24 +0.3 93,526 + A4249_RS16440 0.27 -0.1 93,526 + A4249_RS16440 0.27 +0.9 93,527 - A4249_RS16440 0.27 -0.3 93,617 + A4249_RS16440 0.42 -0.6 93,618 - A4249_RS16440 0.42 +0.4 93,618 - A4249_RS16440 0.42 +0.4 93,622 - A4249_RS16440 0.43 +0.4 93,622 - A4249_RS16440 0.43 -0.0 93,677 - A4249_RS16440 0.51 +0.3 93,678 + A4249_RS16440 0.52 -1.4 93,682 + A4249_RS16440 0.52 +0.1 93,730 + A4249_RS16440 0.60 +1.2 93,730 + A4249_RS16440 0.60 +0.2 93,730 + A4249_RS16440 0.60 -0.2 93,731 - A4249_RS16440 0.60 +0.2 93,738 + A4249_RS16440 0.61 -1.1 93,738 + A4249_RS16440 0.61 -0.1 93,738 + A4249_RS16440 0.61 -0.3 93,739 - A4249_RS16440 0.61 +0.3 93,739 - A4249_RS16440 0.61 -0.2 93,739 - A4249_RS16440 0.61 -0.1 93,739 - A4249_RS16440 0.61 +1.4 93,741 + A4249_RS16440 0.62 -0.3
Or see this region's nucleotide sequence