Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_08355

Experiment: marine broth

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	marine broth
1,928,238	-		CA264_08350	0.30	-0.4
1,928,250	-		CA264_08350	0.31	+0.0
1,928,302	+		CA264_08350	0.36	-0.3
1,928,310	+		CA264_08350	0.36	-0.7
1,928,356	-		CA264_08350	0.41	-1.3
1,928,365	-		CA264_08350	0.42	-0.9
1,928,396	-		CA264_08350	0.45	-0.6
1,928,452	+		CA264_08350	0.50	-1.3
1,928,496	-		CA264_08350	0.54	-0.3
1,928,571	+		CA264_08350	0.61	-1.2
1,928,571	+		CA264_08350	0.61	-1.0
1,928,591	+		CA264_08350	0.63	+3.0
1,928,592	-		CA264_08350	0.63	+2.1
1,928,593	+		CA264_08350	0.63	+0.3
1,928,593	+		CA264_08350	0.63	-0.3
1,928,593	+		CA264_08350	0.63	-0.2
1,928,593	+		CA264_08350	0.63	-0.3
1,928,594	-		CA264_08350	0.63	+0.1
1,928,618	+		CA264_08350	0.66	+0.7
1,928,671	-		CA264_08350	0.71	-1.5
1,928,793	+		CA264_08350	0.82	+0.1
1,928,793	+		CA264_08350	0.82	-0.3
1,928,838	+		CA264_08350	0.86	-0.0
1,928,838	+		CA264_08350	0.86	+1.2
1,928,838	+		CA264_08350	0.86	+0.1
1,928,840	+		CA264_08350	0.87	-0.5
1,928,841	-		CA264_08350	0.87	-0.4
1,928,842	+		CA264_08350	0.87	-0.3
1,928,842	+		CA264_08350	0.87	-1.2
1,928,843	-		CA264_08350	0.87	+0.1
1,928,884	+				+0.1
1,928,884	+				-0.6
1,928,885	-				-0.7
1,928,885	-				-0.1
1,928,893	+				-0.3
1,928,894	-				-0.0
1,928,894	-				+1.7
1,928,897	+				+0.1
1,928,921	+				-1.0
1,928,921	+				+2.0
1,928,940	-				+0.7
1,928,966	+				+3.5
1,928,966	+				-1.0
1,928,967	-				+0.1
1,929,031	+				+0.0
1,929,032	-				-0.6
1,929,032	-				+2.3
1,929,041	+				+0.7
1,929,046	-				-0.3
1,929,046	-				-0.1
1,929,046	-				-1.7
1,929,072	+				+0.9
1,929,072	+				-0.5
1,929,073	-				-0.2
1,929,094	+				-0.1
1,929,109	+				-0.6
1,929,110	-				-0.6
1,929,110	-				+2.9
1,929,110	-				+0.1
1,929,110	-				-0.0
1,929,123	+				+0.1
1,929,127	+				+0.7
1,929,174	-				-0.3
1,929,204	+				-0.6
1,929,220	+				-0.3
1,929,239	+				+0.1
1,929,247	-				+0.3
1,929,263	-				+0.1
1,929,282	+				+0.4
1,929,283	-				-0.2
1,929,306	-				-0.2
1,929,359	-				+0.5
1,929,359	-				+0.5
1,929,369	+		CA264_08355	0.11	+0.5
1,929,400	+		CA264_08355	0.13	-0.3
1,929,495	-		CA264_08355	0.20	-0.3
1,929,495	-		CA264_08355	0.20	+0.1
1,929,495	-		CA264_08355	0.20	-0.4
1,929,528	+		CA264_08355	0.23	+2.3
1,929,565	+		CA264_08355	0.26	-0.9
1,929,566	-		CA264_08355	0.26	+0.3
1,929,622	-		CA264_08355	0.30	-0.3
1,929,658	+		CA264_08355	0.33	-0.6
1,929,658	+		CA264_08355	0.33	-0.2
1,929,658	+		CA264_08355	0.33	-0.2
1,929,658	+		CA264_08355	0.33	+0.7
1,929,658	+		CA264_08355	0.33	-0.0
1,929,659	-		CA264_08355	0.33	+0.2
1,929,659	-		CA264_08355	0.33	-0.3
1,929,659	-		CA264_08355	0.33	-0.7
1,929,659	-		CA264_08355	0.33	-1.1
1,929,664	-		CA264_08355	0.33	-0.5
1,929,685	+		CA264_08355	0.35	-0.2
1,929,685	+		CA264_08355	0.35	-0.9
1,929,686	-		CA264_08355	0.35	-2.2
1,929,692	+		CA264_08355	0.35	-0.3
1,929,695	+		CA264_08355	0.36	-0.1
1,929,716	-		CA264_08355	0.37	-0.2
1,929,737	-		CA264_08355	0.39	-0.4
1,929,743	+		CA264_08355	0.39	-1.3
1,929,744	-		CA264_08355	0.39	+0.0
1,929,744	-		CA264_08355	0.39	+0.1
1,929,744	-		CA264_08355	0.39	-0.2
1,929,766	+		CA264_08355	0.41	-0.6
1,929,799	+		CA264_08355	0.43	+1.8
1,929,800	-		CA264_08355	0.44	-0.0
1,929,886	-		CA264_08355	0.50	-0.5
1,929,914	-		CA264_08355	0.52	+0.8
1,929,924	-		CA264_08355	0.53	+0.3
1,929,932	-		CA264_08355	0.54	-0.2
1,929,936	-		CA264_08355	0.54	-0.2
1,929,936	-		CA264_08355	0.54	-1.7
1,929,936	-		CA264_08355	0.54	+0.3
1,929,936	-		CA264_08355	0.54	-0.1
1,929,977	+		CA264_08355	0.57	-0.9
1,929,978	-		CA264_08355	0.57	+0.7
1,929,981	+		CA264_08355	0.57	+1.7
1,930,010	+		CA264_08355	0.60	-0.6
1,930,011	-		CA264_08355	0.60	-0.2
1,930,011	-		CA264_08355	0.60	-0.4
1,930,024	+		CA264_08355	0.61	-1.4
1,930,106	-		CA264_08355	0.67	-0.5
1,930,116	-		CA264_08355	0.68	-1.1
1,930,144	+		CA264_08355	0.70	-0.4
1,930,144	+		CA264_08355	0.70	-0.4
1,930,145	-		CA264_08355	0.70	-0.7
1,930,147	+		CA264_08355	0.70	+0.4
1,930,199	+		CA264_08355	0.74	+0.4
1,930,199	+		CA264_08355	0.74	-0.6
1,930,325	+		CA264_08355	0.83	-1.2
1,930,336	-		CA264_08355	0.84	-0.8
1,930,351	+		CA264_08355	0.85	-1.4
1,930,352	-		CA264_08355	0.86	-1.3
1,930,352	-		CA264_08355	0.86	+0.1
1,930,353	+		CA264_08355	0.86	-2.0
1,930,353	+		CA264_08355	0.86	+0.4
1,930,354	-		CA264_08355	0.86	-0.2
1,930,354	-		CA264_08355	0.86	+0.9
1,930,367	+		CA264_08355	0.87	-1.9
1,930,380	-		CA264_08355	0.88	-1.1
1,930,397	-		CA264_08355	0.89	+0.3
1,930,436	-				-0.2
1,930,452	-				-0.0
1,930,463	-				-1.1
1,930,463	-				-0.4
1,930,519	+				+0.1
1,930,519	+				-0.1
1,930,520	-				-0.7
1,930,567	-				+0.3
1,930,580	-				+0.2
1,930,580	-				+1.7
1,930,600	-				+0.7
1,930,623	-				+1.1
1,930,815	+				+0.3
1,930,847	+				-1.5
1,930,848	-				-0.5
1,930,848	-				-1.0
1,930,853	-				-1.1
1,930,853	-				-0.0
1,930,885	+				-1.2
1,930,885	+				+0.2
1,930,885	+				-0.5
1,930,895	+				+0.2
1,930,928	-				-1.1
1,930,959	+				+0.9
1,930,959	+				-1.6
1,930,959	+				+0.5
1,930,960	-				+0.5
1,930,960	-				-1.6
1,930,963	+				+0.5
1,930,984	+				+0.3
1,931,002	+				+0.7
1,931,002	+				-0.0
1,931,002	+				-1.6
1,931,003	-				+0.0
1,931,084	-		CA264_08360	0.14	+0.4
1,931,102	+		CA264_08360	0.16	-0.1
1,931,122	+		CA264_08360	0.18	-0.6
1,931,219	-		CA264_08360	0.26	-0.6
1,931,371	+		CA264_08360	0.40	-0.9
1,931,372	-		CA264_08360	0.40	+0.2
1,931,403	-		CA264_08360	0.43	-0.6
1,931,440	+		CA264_08360	0.46	+0.4
1,931,440	+		CA264_08360	0.46	+1.6
1,931,524	+		CA264_08360	0.54	-0.6