Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_07285

Experiment: marine broth

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	marine broth
1,680,904	+		CA264_07280	0.10	-0.2
1,680,904	+		CA264_07280	0.10	-0.1
1,680,924	+		CA264_07280	0.13	+0.0
1,680,924	+		CA264_07280	0.13	-0.8
1,680,961	-		CA264_07280	0.17	-0.3
1,680,991	+		CA264_07280	0.20	+0.4
1,681,027	+		CA264_07280	0.25	+0.4
1,681,054	-		CA264_07280	0.28	+2.2
1,681,218	+		CA264_07280	0.47	-0.2
1,681,218	+		CA264_07280	0.47	-0.4
1,681,288	+		CA264_07280	0.56	+0.7
1,681,289	-		CA264_07280	0.56	+0.0
1,681,296	-		CA264_07280	0.57	+0.4
1,681,296	-		CA264_07280	0.57	+0.8
1,681,440	+		CA264_07280	0.74	+0.6
1,681,441	-		CA264_07280	0.74	+0.3
1,681,503	+		CA264_07280	0.81	+1.2
1,681,506	+		CA264_07280	0.81	-0.3
1,681,529	+		CA264_07280	0.84	+0.0
1,681,577	+		CA264_07280	0.90	+0.6
1,681,578	-		CA264_07280	0.90	-0.1
1,681,594	+				+0.2
1,681,644	+				+0.0
1,681,645	-				+2.2
1,681,655	+				+1.1
1,681,676	+				+0.6
1,681,707	+				+0.3
1,681,708	-				+0.6
1,681,714	-				+0.3
1,681,771	-				-0.1
1,681,772	+				+1.0
1,681,773	-				+0.6
1,681,773	-				+0.3
1,681,780	+				+0.3
1,681,786	-				+0.6
1,681,827	+				+1.5
1,681,827	+				+0.4
1,681,827	+				+2.9
1,681,828	-				+0.4
1,681,831	+				+0.2
1,681,831	+				+0.5
1,681,832	-				-1.0
1,681,832	-				-0.0
1,681,834	-				+2.8
1,681,839	+				-1.0
1,681,839	+				+0.4
1,681,839	+				+1.5
1,681,839	+				+0.8
1,681,840	-				+1.4
1,681,853	+				+1.2
1,681,854	-				+0.2
1,681,854	-				+0.0
1,681,899	-				-0.7
1,681,899	-				+2.2
1,681,940	-				+0.1
1,682,018	-				+0.8
1,682,018	-				+0.3
1,682,018	-				-0.7
1,682,082	+		CA264_07285	0.12	+0.6
1,682,105	-		CA264_07285	0.14	+1.0
1,682,170	-		CA264_07285	0.17	+0.2
1,682,171	+		CA264_07285	0.17	-1.0
1,682,171	+		CA264_07285	0.17	+0.2
1,682,171	+		CA264_07285	0.17	+0.8
1,682,172	-		CA264_07285	0.17	+1.1
1,682,172	-		CA264_07285	0.17	+2.2
1,682,175	+		CA264_07285	0.17	+0.9
1,682,175	+		CA264_07285	0.17	+0.0
1,682,176	-		CA264_07285	0.17	+0.2
1,682,182	+		CA264_07285	0.18	-0.4
1,682,182	+		CA264_07285	0.18	+0.6
1,682,183	-		CA264_07285	0.18	-0.2
1,682,241	+		CA264_07285	0.21	+0.8
1,682,241	+		CA264_07285	0.21	+0.9
1,682,250	-		CA264_07285	0.21	+0.1
1,682,315	+		CA264_07285	0.25	+0.2
1,682,352	-		CA264_07285	0.27	+0.3
1,682,365	+		CA264_07285	0.28	+0.4
1,682,380	-		CA264_07285	0.28	-2.5
1,682,445	+		CA264_07285	0.32	+0.6
1,682,452	-		CA264_07285	0.32	+0.5
1,682,518	+		CA264_07285	0.36	+1.8
1,682,518	+		CA264_07285	0.36	+0.2
1,682,518	+		CA264_07285	0.36	-1.7
1,682,519	-		CA264_07285	0.36	+0.2
1,682,519	-		CA264_07285	0.36	+0.0
1,682,519	-		CA264_07285	0.36	+0.6
1,682,519	-		CA264_07285	0.36	+0.6
1,682,519	-		CA264_07285	0.36	-0.2
1,682,634	-		CA264_07285	0.42	+0.6
1,682,652	-		CA264_07285	0.43	+1.8
1,682,720	+		CA264_07285	0.47	+0.9
1,682,721	-		CA264_07285	0.47	+0.6
1,682,738	-		CA264_07285	0.48	+2.9
1,682,785	-		CA264_07285	0.50	-0.4
1,682,817	+		CA264_07285	0.52	+1.4
1,682,818	-		CA264_07285	0.52	+0.0
1,682,818	-		CA264_07285	0.52	+0.0
1,682,818	-				-1.4
1,682,818	-		CA264_07285	0.52	+0.8
1,682,836	+		CA264_07285	0.53	+0.6
1,682,837	-		CA264_07285	0.53	+1.2
1,682,850	+		CA264_07285	0.54	+0.8
1,683,006	+		CA264_07285	0.62	+1.1
1,683,007	-		CA264_07285	0.62	+1.0
1,683,102	+		CA264_07285	0.67	+0.0
1,683,103	-		CA264_07285	0.67	+0.4
1,683,103	-		CA264_07285	0.67	+0.2
1,683,196	+		CA264_07285	0.72	+0.6
1,683,197	-		CA264_07285	0.72	-0.4
1,683,197	-		CA264_07285	0.72	-0.1
1,683,234	+		CA264_07285	0.74	+0.5
1,683,234	+		CA264_07285	0.74	+2.0
1,683,234	+		CA264_07285	0.74	+0.8
1,683,235	-		CA264_07285	0.74	+0.1
1,683,235	-		CA264_07285	0.74	+0.6
1,683,235	-		CA264_07285	0.74	+0.2
1,683,245	+		CA264_07285	0.75	+0.9
1,683,265	+		CA264_07285	0.76	+1.0
1,683,265	+		CA264_07285	0.76	-0.7
1,683,266	-		CA264_07285	0.76	+0.9
1,683,266	-		CA264_07285	0.76	+1.7
1,683,266	-		CA264_07285	0.76	+1.4
1,683,268	-		CA264_07285	0.76	+2.0
1,683,268	-		CA264_07285	0.76	+1.6
1,683,271	-		CA264_07285	0.76	+2.3
1,683,271	-		CA264_07285	0.76	-0.5
1,683,357	-		CA264_07285	0.81	+1.1
1,683,371	+		CA264_07285	0.82	+0.6
1,683,371	+		CA264_07285	0.82	+0.5
1,683,472	+		CA264_07285	0.87	-0.4
1,683,501	+		CA264_07285	0.89	+0.0
1,683,501	+		CA264_07285	0.89	+2.2
1,683,501	+		CA264_07285	0.89	+1.2
1,683,502	-		CA264_07285	0.89	-0.7
1,683,502	-		CA264_07285	0.89	+1.1
1,683,502	-		CA264_07285	0.89	+0.0
1,683,502	-		CA264_07285	0.89	+0.2
1,683,508	-		CA264_07285	0.89	-0.1
1,683,601	+				+0.6
1,683,638	+				+0.6
1,683,645	+				+0.2
1,683,847	+				+0.6
1,683,848	-				-0.6
1,683,878	-				+1.3
1,683,881	+				+1.2
1,683,881	+				+0.8
1,683,881	+				+0.3
1,683,881	+				+1.0
1,683,882	-				+1.0
1,683,882	-				-0.4
1,683,882	-				-2.0
1,683,882	-				-1.4
1,683,886	-				+1.8
1,683,890	-				+1.0
1,683,909	+				+1.3
1,683,975	+				-0.0
1,684,000	+				-1.2
1,684,149	+		CA264_07290	0.20	+0.3
1,684,165	-		CA264_07290	0.22	-0.2
1,684,228	+		CA264_07290	0.28	-0.9
1,684,254	-		CA264_07290	0.30	+0.0
1,684,312	+		CA264_07290	0.35	+0.9
1,684,395	+		CA264_07290	0.43	+0.0
1,684,466	-		CA264_07290	0.49	-1.8
1,684,496	-		CA264_07290	0.52	-1.3
1,684,529	+		CA264_07290	0.55	-0.5
1,684,529	+		CA264_07290	0.55	+0.9
1,684,532	+		CA264_07290	0.56	-1.0
1,684,533	-		CA264_07290	0.56	-1.5
1,684,544	+		CA264_07290	0.57	-1.5
1,684,634	+		CA264_07290	0.65	-1.4
1,684,657	-		CA264_07290	0.67	+0.6
1,684,659	-		CA264_07290	0.67	-0.8