Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_04590

Experiment: marine broth

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	marine broth
1,060,395	+		CA264_04585	0.13	-1.2
1,060,396	-		CA264_04585	0.13	-1.3
1,060,423	+		CA264_04585	0.15	-2.7
1,060,436	+		CA264_04585	0.16	-0.8
1,060,441	-		CA264_04585	0.17	-1.5
1,060,457	-		CA264_04585	0.18	-2.8
1,060,457	-		CA264_04585	0.18	-2.9
1,060,457	-		CA264_04585	0.18	-3.3
1,060,542	-		CA264_04585	0.26	-0.2
1,060,672	-		CA264_04585	0.38	-1.8
1,060,683	+		CA264_04585	0.39	+1.0
1,060,684	-		CA264_04585	0.39	-2.1
1,060,709	-		CA264_04585	0.42	-0.8
1,060,739	-		CA264_04585	0.45	-1.4
1,060,785	+		CA264_04585	0.49	-2.0
1,060,800	-		CA264_04585	0.50	+0.5
1,060,800	-		CA264_04585	0.50	+1.8
1,060,802	-		CA264_04585	0.50	-2.2
1,060,802	-		CA264_04585	0.50	-1.1
1,060,802	-		CA264_04585	0.50	-2.2
1,060,806	+		CA264_04585	0.51	-1.0
1,060,942	-		CA264_04585	0.63	-2.8
1,060,963	-		CA264_04585	0.65	-3.5
1,060,969	-		CA264_04585	0.66	-1.1
1,060,972	-		CA264_04585	0.66	-1.5
1,061,028	+		CA264_04585	0.71	-2.7
1,061,029	-		CA264_04585	0.71	-1.2
1,061,029	-		CA264_04585	0.71	-1.8
1,061,047	+		CA264_04585	0.73	-1.5
1,061,055	-		CA264_04585	0.74	+0.8
1,061,056	+		CA264_04585	0.74	-1.7
1,061,056	+		CA264_04585	0.74	-1.4
1,061,056	+		CA264_04585	0.74	-2.2
1,061,056	+		CA264_04585	0.74	+0.1
1,061,057	-		CA264_04585	0.74	-1.4
1,061,065	+		CA264_04585	0.75	-1.6
1,061,065	+		CA264_04585	0.75	-1.3
1,061,065	+		CA264_04585	0.75	-0.7
1,061,065	+		CA264_04585	0.75	-2.4
1,061,066	-		CA264_04585	0.75	-1.2
1,061,066	-		CA264_04585	0.75	+0.5
1,061,066	-		CA264_04585	0.75	-1.8
1,061,067	+		CA264_04585	0.75	-2.2
1,061,067	+		CA264_04585	0.75	-0.2
1,061,092	+		CA264_04585	0.77	-1.3
1,061,094	+		CA264_04585	0.77	-0.4
1,061,094	+		CA264_04585	0.77	+0.1
1,061,098	+		CA264_04585	0.78	-0.2
1,061,099	-		CA264_04585	0.78	-1.2
1,061,099	-		CA264_04585	0.78	-2.3
1,061,099	-		CA264_04585	0.78	-1.2
1,061,113	-		CA264_04585	0.79	-1.4
1,061,113	-		CA264_04585	0.79	+0.4
1,061,165	-		CA264_04585	0.84	-3.1
1,061,184	-		CA264_04585	0.86	-1.4
1,061,204	-		CA264_04585	0.88	+0.5
1,061,206	+		CA264_04585	0.88	-0.9
1,061,206	+		CA264_04585	0.88	+1.8
1,061,207	-		CA264_04585	0.88	-0.6
1,061,226	+		CA264_04585	0.90	-0.1
1,061,232	-				-1.8
1,061,232	-				-0.9
1,061,232	-				-2.7
1,061,234	-				-1.9
1,061,234	-				-1.5
1,061,287	-				-1.2
1,061,289	+				-1.8
1,061,290	-				-1.5
1,061,309	+				-1.7
1,061,310	-				-0.4
1,061,310	-				-1.0
1,061,318	-				-1.2
1,061,379	-				+0.9
1,061,384	+				-1.9
1,061,384	+				-0.8
1,061,384	+				-0.4
1,061,384	+				-0.3
1,061,385	-				-1.2
1,061,388	+				-2.8
1,061,388	+				-1.1
1,061,389	-				-1.3
1,061,389	-				-1.5
1,061,389	-				-2.0
1,061,413	+				+0.8
1,061,421	+				-0.7
1,061,426	+				-0.5
1,061,426	+				-1.1
1,061,427	-				+0.0
1,061,427	-				-1.9
1,061,427	-				-1.0
1,061,522	+		CA264_04590	0.13	-0.3
1,061,552	-		CA264_04590	0.16	+2.1
1,061,594	+		CA264_04590	0.19	-0.2
1,061,637	+		CA264_04590	0.22	-0.9
1,061,638	-		CA264_04590	0.22	-2.1
1,061,638	-		CA264_04590	0.22	-2.5
1,061,705	+		CA264_04590	0.27	+0.8
1,061,707	+		CA264_04590	0.27	-1.5
1,061,708	-		CA264_04590	0.27	-0.8
1,061,708	-		CA264_04590	0.27	-2.6
1,061,708	-		CA264_04590	0.27	-0.4
1,061,724	+		CA264_04590	0.28	-0.8
1,061,725	-		CA264_04590	0.29	-1.2
1,061,726	+		CA264_04590	0.29	-1.7
1,061,727	-		CA264_04590	0.29	-1.2
1,061,727	-		CA264_04590	0.29	-1.9
1,061,740	+		CA264_04590	0.30	-0.8
1,061,750	-		CA264_04590	0.30	+0.8
1,061,807	+		CA264_04590	0.35	-1.5
1,061,807	+		CA264_04590	0.35	-2.2
1,061,808	-		CA264_04590	0.35	-1.0
1,061,808	-		CA264_04590	0.35	-1.5
1,061,821	+		CA264_04590	0.36	-0.8
1,061,821	+		CA264_04590	0.36	-2.8
1,061,822	-		CA264_04590	0.36	+1.4
1,061,829	+		CA264_04590	0.36	-0.4
1,061,864	+		CA264_04590	0.39	-1.0
1,061,870	-		CA264_04590	0.39	-1.2
1,061,870	-		CA264_04590	0.39	-0.5
1,061,877	-		CA264_04590	0.40	-0.8
1,061,911	-		CA264_04590	0.42	-0.7
1,061,936	+		CA264_04590	0.44	-1.0
1,061,936	+		CA264_04590	0.44	-0.8
1,061,936	+		CA264_04590	0.44	-1.5
1,061,936	+		CA264_04590	0.44	+0.5
1,061,937	-		CA264_04590	0.44	-1.2
1,061,940	-		CA264_04590	0.45	+0.1
1,061,940	-		CA264_04590	0.45	-1.1
1,061,968	+		CA264_04590	0.47	-0.5
1,061,968	+		CA264_04590	0.47	-0.9
1,061,969	-		CA264_04590	0.47	+0.2
1,061,969	-		CA264_04590	0.47	+1.8
1,061,978	+		CA264_04590	0.48	-0.8
1,061,978	+		CA264_04590	0.48	-1.4
1,061,978	+		CA264_04590	0.48	+0.2
1,061,978	+		CA264_04590	0.48	-1.3
1,061,979	-		CA264_04590	0.48	-2.0
1,061,979	-		CA264_04590	0.48	-0.1
1,061,988	-		CA264_04590	0.48	-0.9
1,061,998	+		CA264_04590	0.49	-0.7
1,062,004	+		CA264_04590	0.49	+0.8
1,062,033	+		CA264_04590	0.52	-1.8
1,062,034	-		CA264_04590	0.52	-2.1
1,062,039	+		CA264_04590	0.52	-1.9
1,062,043	+		CA264_04590	0.52	-0.7
1,062,043	+		CA264_04590	0.52	+0.8
1,062,043	+		CA264_04590	0.52	-0.8
1,062,044	-		CA264_04590	0.52	-1.9
1,062,044	-		CA264_04590	0.52	-1.5
1,062,047	-		CA264_04590	0.53	-0.5
1,062,051	+		CA264_04590	0.53	-0.8
1,062,074	-		CA264_04590	0.55	-1.2
1,062,085	-		CA264_04590	0.56	-1.3
1,062,122	+		CA264_04590	0.58	-1.9
1,062,123	-		CA264_04590	0.58	-0.7
1,062,123	-		CA264_04590	0.58	-0.8
1,062,125	-		CA264_04590	0.59	-1.1
1,062,125	-		CA264_04590	0.59	-2.3
1,062,125	-		CA264_04590	0.59	-1.1
1,062,135	+		CA264_04590	0.59	-1.8
1,062,136	-		CA264_04590	0.59	-0.9
1,062,223	+		CA264_04590	0.66	-3.4
1,062,224	-		CA264_04590	0.66	+1.5
1,062,224	-		CA264_04590	0.66	-0.7
1,062,237	-		CA264_04590	0.67	-1.2
1,062,254	+		CA264_04590	0.68	-1.3
1,062,255	-		CA264_04590	0.68	-0.2
1,062,257	+		CA264_04590	0.68	+0.9
1,062,258	-		CA264_04590	0.69	-0.2
1,062,299	-		CA264_04590	0.72	-0.9
1,062,301	-		CA264_04590	0.72	-0.8
1,062,319	-		CA264_04590	0.73	-0.8
1,062,319	-		CA264_04590	0.73	-0.7
1,062,329	-		CA264_04590	0.74	+0.2
1,062,331	+		CA264_04590	0.74	-0.8
1,062,331	+		CA264_04590	0.74	-1.2
1,062,335	+		CA264_04590	0.74	+0.4
1,062,365	-		CA264_04590	0.77	-1.4
1,062,402	-		CA264_04590	0.79	-0.2
1,062,437	+		CA264_04590	0.82	-1.2
1,062,458	+		CA264_04590	0.84	-1.5
1,062,506	+		CA264_04590	0.87	-0.9
1,062,509	+		CA264_04590	0.87	-0.1
1,062,509	+		CA264_04590	0.87	-0.8
1,062,521	+		CA264_04590	0.88	-0.9
1,062,525	-		CA264_04590	0.89	-0.3
1,062,542	+		CA264_04590	0.90	-0.0
1,062,551	+				-1.5
1,062,584	+				-0.2
1,062,585	-				-0.9
1,062,609	-				-1.0
1,062,609	-				-0.2
1,062,613	+				-0.8
1,062,614	-				-0.7
1,062,616	-				+0.2
1,062,629	+				+0.3
1,062,766	+		CA264_04595	0.10	-1.5
1,062,766	+		CA264_04595	0.10	-1.5
1,062,775	+		CA264_04595	0.11	-0.6
1,062,775	+		CA264_04595	0.11	-0.2
1,062,775	+		CA264_04595	0.11	-0.7
1,062,776	-		CA264_04595	0.11	-1.9
1,062,776	-		CA264_04595	0.11	+0.8
1,062,776	-		CA264_04595	0.11	-1.4
1,062,776	-		CA264_04595	0.11	-0.8
1,062,789	-		CA264_04595	0.12	-2.8
1,062,790	+		CA264_04595	0.13	-0.7
1,062,806	+		CA264_04595	0.14	-0.5
1,062,842	+		CA264_04595	0.17	+0.6
1,062,843	-		CA264_04595	0.18	+0.8
1,062,914	+		CA264_04595	0.24	-0.7
1,062,915	-		CA264_04595	0.24	-2.2
1,062,970	-		CA264_04595	0.29	-2.0
1,062,979	+		CA264_04595	0.30	-1.3
1,063,014	+		CA264_04595	0.33	-1.3
1,063,014	+		CA264_04595	0.33	+0.2
1,063,015	-		CA264_04595	0.34	-0.8
1,063,015	-		CA264_04595	0.34	-0.4
1,063,021	+		CA264_04595	0.34	-0.9
1,063,063	+		CA264_04595	0.38	-1.2
1,063,066	+		CA264_04595	0.38	-1.5
1,063,066	+		CA264_04595	0.38	-1.4
1,063,066	+		CA264_04595	0.38	-0.8
1,063,066	+		CA264_04595	0.38	-2.8
1,063,066	+		CA264_04595	0.38	-2.3
1,063,066	+		CA264_04595	0.38	-1.1
1,063,067	-		CA264_04595	0.38	-2.2
1,063,067	-		CA264_04595	0.38	-1.0
1,063,067	-		CA264_04595	0.38	-2.0
1,063,067	-		CA264_04595	0.38	-0.6
1,063,067	-		CA264_04595	0.38	-1.0
1,063,070	+		CA264_04595	0.39	-0.2
1,063,071	-		CA264_04595	0.39	-0.8
1,063,089	+		CA264_04595	0.40	-0.8
1,063,129	+		CA264_04595	0.44	-1.2
1,063,132	-		CA264_04595	0.44	-1.0
1,063,132	-		CA264_04595	0.44	-0.2
1,063,159	-		CA264_04595	0.47	-0.6
1,063,159	-		CA264_04595	0.47	-0.8
1,063,161	-		CA264_04595	0.47	-0.8
1,063,200	-		CA264_04595	0.51	-2.1
1,063,203	-		CA264_04595	0.51	-0.2
1,063,242	+		CA264_04595	0.55	+1.4
1,063,268	-		CA264_04595	0.57	-0.6
1,063,268	-		CA264_04595	0.57	-1.9
1,063,294	+		CA264_04595	0.59	-1.4
1,063,302	+		CA264_04595	0.60	+0.4
1,063,302	+		CA264_04595	0.60	+0.8
1,063,303	-		CA264_04595	0.60	-0.6
1,063,437	+		CA264_04595	0.73	-1.2
1,063,441	+		CA264_04595	0.73	-0.8
1,063,441	+		CA264_04595	0.73	-0.2
1,063,441	+		CA264_04595	0.73	+0.1
1,063,441	+		CA264_04595	0.73	-2.6
1,063,441	+		CA264_04595	0.73	-1.6
1,063,441	+		CA264_04595	0.73	-0.3
1,063,442	-		CA264_04595	0.73	-2.1
1,063,443	+		CA264_04595	0.73	-0.8
1,063,444	-		CA264_04595	0.73	-2.7
1,063,462	+		CA264_04595	0.75	-0.9
1,063,462	+		CA264_04595	0.75	-0.7
1,063,462	+		CA264_04595	0.75	+0.2
1,063,462	+		CA264_04595	0.75	-1.2
1,063,464	+		CA264_04595	0.75	+0.4
1,063,465	-		CA264_04595	0.75	-1.5
1,063,465	-		CA264_04595	0.75	-3.9
1,063,501	-		CA264_04595	0.79	-0.9
1,063,515	-		CA264_04595	0.80	-0.8
1,063,530	-		CA264_04595	0.81	-1.3
1,063,568	+		CA264_04595	0.85	-1.1
1,063,568	+		CA264_04595	0.85	-0.2
1,063,569	-		CA264_04595	0.85	-1.5
1,063,572	+		CA264_04595	0.85	+1.1
1,063,582	-		CA264_04595	0.86	-0.8
1,063,582	-		CA264_04595	0.86	-0.3
1,063,617	-		CA264_04595	0.90	+0.8
1,063,625	+				-1.1
1,063,625	+				-0.2
1,063,625	+				+0.1
1,063,636	-				-0.8
1,063,636	-				-1.2