Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_04580

Experiment: marine broth

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	marine broth
1,057,997	+		CA264_04575	0.16	-0.8
1,057,997	+		CA264_04575	0.16	-0.3
1,057,997	+		CA264_04575	0.16	-1.2
1,057,998	-		CA264_04575	0.16	-0.1
1,057,998	-		CA264_04575	0.16	-0.3
1,057,998	-		CA264_04575	0.16	-1.0
1,057,998	-		CA264_04575	0.16	-0.4
1,058,072	-		CA264_04575	0.23	+0.5
1,058,075	-		CA264_04575	0.23	-2.4
1,058,122	+		CA264_04575	0.28	-0.9
1,058,122	+		CA264_04575	0.28	-0.8
1,058,123	-		CA264_04575	0.28	-0.2
1,058,174	-		CA264_04575	0.32	+0.7
1,058,189	-		CA264_04575	0.34	-1.2
1,058,279	-		CA264_04575	0.42	-1.1
1,058,279	-		CA264_04575	0.42	+1.8
1,058,281	-		CA264_04575	0.42	+0.2
1,058,286	-		CA264_04575	0.42	+0.0
1,058,286	-		CA264_04575	0.42	-0.8
1,058,286	-		CA264_04575	0.42	-0.1
1,058,286	-		CA264_04575	0.42	-0.4
1,058,288	+		CA264_04575	0.42	-1.4
1,058,288	+		CA264_04575	0.42	-0.6
1,058,289	-		CA264_04575	0.43	-0.7
1,058,289	-		CA264_04575	0.43	-0.4
1,058,289	-		CA264_04575	0.43	+0.8
1,058,308	-		CA264_04575	0.44	-0.5
1,058,308	-		CA264_04575	0.44	-0.1
1,058,308	-		CA264_04575	0.44	-0.5
1,058,384	-		CA264_04575	0.51	-0.1
1,058,385	+		CA264_04575	0.51	+0.8
1,058,386	-		CA264_04575	0.51	-0.8
1,058,429	-		CA264_04575	0.55	-0.3
1,058,429	-		CA264_04575	0.55	-1.5
1,058,430	+		CA264_04575	0.55	-0.1
1,058,430	+		CA264_04575	0.55	-0.6
1,058,431	-		CA264_04575	0.55	+1.0
1,058,455	+		CA264_04575	0.57	-0.6
1,058,456	-		CA264_04575	0.58	-0.0
1,058,472	-		CA264_04575	0.59	-0.3
1,058,476	-		CA264_04575	0.59	-0.4
1,058,485	+		CA264_04575	0.60	-0.2
1,058,486	-		CA264_04575	0.60	-1.1
1,058,547	+		CA264_04575	0.66	-0.5
1,058,547	+		CA264_04575	0.66	-0.4
1,058,563	-		CA264_04575	0.67	-1.0
1,058,566	+		CA264_04575	0.67	-2.6
1,058,583	+		CA264_04575	0.69	-0.6
1,058,590	+		CA264_04575	0.70	-0.4
1,058,590	+		CA264_04575	0.70	-0.5
1,058,590	+		CA264_04575	0.70	-0.3
1,058,590	+		CA264_04575	0.70	-0.8
1,058,591	-		CA264_04575	0.70	+0.3
1,058,591	-		CA264_04575	0.70	-0.9
1,058,594	+		CA264_04575	0.70	-0.2
1,058,594	+		CA264_04575	0.70	+0.9
1,058,595	-		CA264_04575	0.70	-0.8
1,058,595	-		CA264_04575	0.70	-0.9
1,058,595	-		CA264_04575	0.70	-0.8
1,058,595	-		CA264_04575	0.70	-1.0
1,058,645	+		CA264_04575	0.74	-0.8
1,058,646	-		CA264_04575	0.75	-1.1
1,058,646	-		CA264_04575	0.75	-0.2
1,058,649	-		CA264_04575	0.75	-0.6
1,058,652	-		CA264_04575	0.75	+0.3
1,058,652	-		CA264_04575	0.75	-1.3
1,058,658	+		CA264_04575	0.76	-0.2
1,058,659	-		CA264_04575	0.76	-0.2
1,058,659	-		CA264_04575	0.76	-0.3
1,058,659	-		CA264_04575	0.76	-0.1
1,058,682	-		CA264_04575	0.78	-0.1
1,058,684	-		CA264_04575	0.78	-0.2
1,058,687	+		CA264_04575	0.78	-1.8
1,058,687	+		CA264_04575	0.78	-0.9
1,058,696	+		CA264_04575	0.79	-0.7
1,058,702	+		CA264_04575	0.80	+1.1
1,058,706	+		CA264_04575	0.80	-1.4
1,058,707	-		CA264_04575	0.80	-1.2
1,058,735	+		CA264_04575	0.83	-1.0
1,058,735	+		CA264_04575	0.83	-1.2
1,058,736	-		CA264_04575	0.83	-2.1
1,058,736	-		CA264_04575	0.83	-0.6
1,058,747	-		CA264_04575	0.84	+1.0
1,058,755	+		CA264_04575	0.84	+0.0
1,058,756	-		CA264_04575	0.84	+1.4
1,058,783	-		CA264_04575	0.87	+1.2
1,058,783	-		CA264_04575	0.87	-0.5
1,058,786	+		CA264_04575	0.87	-0.2
1,058,786	+		CA264_04575	0.87	-0.2
1,058,787	-		CA264_04575	0.87	+0.1
1,058,787	-		CA264_04575	0.87	-0.1
1,058,800	+		CA264_04575	0.88	-0.4
1,058,836	-				-0.2
1,058,837	+				+0.2
1,058,838	-				-0.7
1,058,847	-				+0.2
1,058,856	-				-0.4
1,058,878	-				-0.4
1,058,883	-				-0.7
1,058,898	-				-1.2
1,058,900	+				-0.7
1,058,901	-				-1.0
1,058,936	+				-1.2
1,058,936	+				-1.2
1,058,937	-				-0.3
1,058,952	+				-0.4
1,058,952	+				-0.6
1,058,952	+				-0.4
1,058,966	+				-1.4
1,059,014	-				-0.1
1,059,184	+		CA264_04580	0.16	-0.2
1,059,184	+		CA264_04580	0.16	-2.3
1,059,184	+		CA264_04580	0.16	-2.2
1,059,189	+		CA264_04580	0.16	-0.5
1,059,196	+		CA264_04580	0.17	-3.4
1,059,196	+		CA264_04580	0.17	-1.2
1,059,197	-		CA264_04580	0.17	-1.2
1,059,293	+		CA264_04580	0.24	-2.4
1,059,298	+		CA264_04580	0.25	-0.8
1,059,299	-		CA264_04580	0.25	-3.1
1,059,331	+		CA264_04580	0.27	-1.9
1,059,332	-		CA264_04580	0.27	-0.8
1,059,339	+		CA264_04580	0.28	+0.4
1,059,398	-		CA264_04580	0.33	-1.7
1,059,399	+		CA264_04580	0.33	-1.9
1,059,399	+		CA264_04580	0.33	+0.8
1,059,399	+		CA264_04580	0.33	-1.6
1,059,399	+		CA264_04580	0.33	+0.8
1,059,399	+		CA264_04580	0.33	-2.9
1,059,431	+		CA264_04580	0.35	-0.0
1,059,431	+		CA264_04580	0.35	+1.4
1,059,432	-		CA264_04580	0.35	-2.8
1,059,432	-		CA264_04580	0.35	-0.8
1,059,466	-		CA264_04580	0.38	-1.8
1,059,484	+		CA264_04580	0.40	-0.8
1,059,522	-		CA264_04580	0.43	+0.8
1,059,690	+		CA264_04580	0.56	-1.8
1,059,693	+		CA264_04580	0.56	-2.4
1,059,693	+		CA264_04580	0.56	-0.3
1,059,693	+		CA264_04580	0.56	-2.0
1,059,699	+		CA264_04580	0.57	+0.8
1,059,704	+		CA264_04580	0.57	-2.9
1,059,704	+		CA264_04580	0.57	+0.2
1,059,704	+		CA264_04580	0.57	-2.0
1,059,704	+		CA264_04580	0.57	-0.7
1,059,704	+		CA264_04580	0.57	-1.0
1,059,800	+		CA264_04580	0.65	-0.5
1,059,801	-		CA264_04580	0.65	-1.9
1,059,887	+		CA264_04580	0.72	-2.3
1,059,988	-		CA264_04580	0.80	-3.0
1,059,996	+		CA264_04580	0.81	-0.6
1,059,998	+		CA264_04580	0.81	-0.3
1,059,998	+		CA264_04580	0.81	+0.4
1,060,012	+		CA264_04580	0.82	-0.8
1,060,037	+		CA264_04580	0.84	-2.9
1,060,038	-		CA264_04580	0.84	-2.8
1,060,039	+		CA264_04580	0.84	-2.2
1,060,039	+		CA264_04580	0.84	-2.3
1,060,081	+		CA264_04580	0.88	-1.8
1,060,190	-				-0.7
1,060,190	-				-4.1
1,060,207	+				-0.4
1,060,207	+				+0.5
1,060,207	+				-0.2
1,060,259	+				-0.2
1,060,260	-				+0.2
1,060,260	-				-1.5
1,060,291	-				-2.4
1,060,291	-				-1.2
1,060,333	-				-1.0
1,060,338	+				-1.6
1,060,395	+		CA264_04585	0.13	-1.2
1,060,396	-		CA264_04585	0.13	-1.3
1,060,423	+		CA264_04585	0.15	-2.7
1,060,436	+		CA264_04585	0.16	-0.8
1,060,441	-		CA264_04585	0.17	-1.5
1,060,457	-		CA264_04585	0.18	-2.8
1,060,457	-		CA264_04585	0.18	-2.9
1,060,457	-		CA264_04585	0.18	-3.3
1,060,542	-		CA264_04585	0.26	-0.2
1,060,672	-		CA264_04585	0.38	-1.8
1,060,683	+		CA264_04585	0.39	+1.0
1,060,684	-		CA264_04585	0.39	-2.1
1,060,709	-		CA264_04585	0.42	-0.8
1,060,739	-		CA264_04585	0.45	-1.4
1,060,785	+		CA264_04585	0.49	-2.0
1,060,800	-		CA264_04585	0.50	+0.5
1,060,800	-		CA264_04585	0.50	+1.8
1,060,802	-		CA264_04585	0.50	-2.2
1,060,802	-		CA264_04585	0.50	-1.1
1,060,802	-		CA264_04585	0.50	-2.2
1,060,806	+		CA264_04585	0.51	-1.0
1,060,942	-		CA264_04585	0.63	-2.8
1,060,963	-		CA264_04585	0.65	-3.5
1,060,969	-		CA264_04585	0.66	-1.1
1,060,972	-		CA264_04585	0.66	-1.5
1,061,028	+		CA264_04585	0.71	-2.7
1,061,029	-		CA264_04585	0.71	-1.2
1,061,029	-		CA264_04585	0.71	-1.8
1,061,047	+		CA264_04585	0.73	-1.5
1,061,055	-		CA264_04585	0.74	+0.8
1,061,056	+		CA264_04585	0.74	-1.7
1,061,056	+		CA264_04585	0.74	-1.4
1,061,056	+		CA264_04585	0.74	-2.2
1,061,056	+		CA264_04585	0.74	+0.1
1,061,057	-		CA264_04585	0.74	-1.4
1,061,065	+		CA264_04585	0.75	-1.6
1,061,065	+		CA264_04585	0.75	-1.3
1,061,065	+		CA264_04585	0.75	-0.7
1,061,065	+		CA264_04585	0.75	-2.4
1,061,066	-		CA264_04585	0.75	-1.2
1,061,066	-		CA264_04585	0.75	+0.5
1,061,066	-		CA264_04585	0.75	-1.8
1,061,067	+		CA264_04585	0.75	-2.2
1,061,067	+		CA264_04585	0.75	-0.2
1,061,092	+		CA264_04585	0.77	-1.3
1,061,094	+		CA264_04585	0.77	-0.4
1,061,094	+		CA264_04585	0.77	+0.1
1,061,098	+		CA264_04585	0.78	-0.2
1,061,099	-		CA264_04585	0.78	-1.2
1,061,099	-		CA264_04585	0.78	-2.3
1,061,099	-		CA264_04585	0.78	-1.2
1,061,113	-		CA264_04585	0.79	-1.4
1,061,113	-		CA264_04585	0.79	+0.4
1,061,165	-		CA264_04585	0.84	-3.1
1,061,184	-		CA264_04585	0.86	-1.4
1,061,204	-		CA264_04585	0.88	+0.5
1,061,206	+		CA264_04585	0.88	-0.9
1,061,206	+		CA264_04585	0.88	+1.8
1,061,207	-		CA264_04585	0.88	-0.6
1,061,226	+		CA264_04585	0.90	-0.1
1,061,232	-				-1.8
1,061,232	-				-0.9
1,061,232	-				-2.7
1,061,234	-				-1.9
1,061,234	-				-1.5