Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3078

Experiment: D-Xylose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Xylose (C)
3,671,200	-				+1.2
3,671,202	+				+0.0
3,671,202	+				-0.3
3,671,202	+				-0.3
3,671,233	-		Echvi_3077	0.12	-0.4
3,671,254	-		Echvi_3077	0.14	-0.8
3,671,254	-		Echvi_3077	0.14	+0.6
3,671,257	-		Echvi_3077	0.15	-3.1
3,671,289	+		Echvi_3077	0.18	+1.3
3,671,312	-		Echvi_3077	0.20	-0.1
3,671,389	-		Echvi_3077	0.28	-0.5
3,671,389	-		Echvi_3077	0.28	+0.3
3,671,389	-		Echvi_3077	0.28	+0.4
3,671,389	-		Echvi_3077	0.28	-0.4
3,671,392	+		Echvi_3077	0.28	-1.1
3,671,392	+		Echvi_3077	0.28	+1.3
3,671,392	+		Echvi_3077	0.28	+0.6
3,671,392	+		Echvi_3077	0.28	+0.1
3,671,392	+		Echvi_3077	0.28	+0.0
3,671,483	+		Echvi_3077	0.37	+1.0
3,671,605	+		Echvi_3077	0.49	-1.5
3,671,605	+		Echvi_3077	0.49	+0.2
3,671,633	-		Echvi_3077	0.52	+0.9
3,671,650	-		Echvi_3077	0.53	-0.2
3,671,734	+		Echvi_3077	0.62	+0.5
3,671,735	-		Echvi_3077	0.62	+0.4
3,671,735	-		Echvi_3077	0.62	-1.8
3,671,736	+		Echvi_3077	0.62	-1.2
3,671,737	-		Echvi_3077	0.62	+0.1
3,671,737	-		Echvi_3077	0.62	-0.3
3,671,780	+		Echvi_3077	0.66	-0.7
3,671,851	+		Echvi_3077	0.73	-1.3
3,671,892	+		Echvi_3077	0.77	+0.5
3,671,893	-		Echvi_3077	0.77	+0.1
3,671,893	-		Echvi_3077	0.77	+1.2
3,671,896	-		Echvi_3077	0.78	-1.9
3,671,950	+		Echvi_3077	0.83	-0.1
3,671,951	-		Echvi_3077	0.83	-0.2
3,672,019	-		Echvi_3077	0.90	+0.3
3,672,041	-				-0.1
3,672,041	-				-0.8
3,672,043	-				+0.1
3,672,091	-				-0.6
3,672,139	+				-1.5
3,672,190	+				-1.9
3,672,194	+				+0.2
3,672,214	+				-0.4
3,672,215	-				-1.6
3,672,299	+				-0.8
3,672,299	+				-0.4
3,672,300	-				+1.4
3,672,300	-				-1.2
3,672,303	+				+0.2
3,672,304	-				+0.1
3,672,304	-				+0.2
3,672,304	-				+0.2
3,672,304	-				-0.0
3,672,370	-		Echvi_3078	0.11	-0.6
3,672,395	-		Echvi_3078	0.13	-0.2
3,672,488	+		Echvi_3078	0.19	+0.3
3,672,488	+		Echvi_3078	0.19	-0.8
3,672,489	-		Echvi_3078	0.19	+0.0
3,672,549	+		Echvi_3078	0.22	+0.4
3,672,552	+		Echvi_3078	0.23	+1.0
3,672,558	+		Echvi_3078	0.23	+0.3
3,672,587	+		Echvi_3078	0.25	-2.3
3,672,588	-		Echvi_3078	0.25	+0.8
3,672,638	-		Echvi_3078	0.28	-0.2
3,672,731	+		Echvi_3078	0.34	-0.4
3,672,732	-		Echvi_3078	0.34	-2.0
3,672,732	-		Echvi_3078	0.34	-1.2
3,672,761	-		Echvi_3078	0.35	-1.2
3,672,827	+		Echvi_3078	0.39	-0.8
3,672,849	+		Echvi_3078	0.41	-1.2
3,672,867	+		Echvi_3078	0.42	-0.4
3,672,868	-		Echvi_3078	0.42	-1.1
3,672,871	-		Echvi_3078	0.42	+0.8
3,672,945	+		Echvi_3078	0.47	+0.5
3,672,956	+		Echvi_3078	0.47	-1.2
3,672,957	-		Echvi_3078	0.47	+0.5
3,673,013	-		Echvi_3078	0.51	-0.4
3,673,130	+		Echvi_3078	0.58	+1.8
3,673,131	-		Echvi_3078	0.58	+1.2
3,673,195	-		Echvi_3078	0.62	-1.9
3,673,205	+		Echvi_3078	0.63	+0.2
3,673,316	-		Echvi_3078	0.69	-0.3
3,673,323	+		Echvi_3078	0.70	-0.1
3,673,325	+		Echvi_3078	0.70	-0.4
3,673,406	+		Echvi_3078	0.75	+0.8
3,673,410	-		Echvi_3078	0.75	-0.3
3,673,412	+		Echvi_3078	0.75	+0.5
3,673,413	-		Echvi_3078	0.75	-0.6
3,673,462	+		Echvi_3078	0.78	-0.2
3,673,462	+		Echvi_3078	0.78	+0.6
3,673,463	-		Echvi_3078	0.78	-0.7
3,673,488	+		Echvi_3078	0.80	-0.2
3,673,488	+		Echvi_3078	0.80	+1.9
3,673,488	+		Echvi_3078	0.80	-2.1
3,673,488	+		Echvi_3078	0.80	+0.8
3,673,488	+		Echvi_3078	0.80	+0.4
3,673,488	+		Echvi_3078	0.80	+0.1
3,673,489	-		Echvi_3078	0.80	-0.3
3,673,489	-		Echvi_3078	0.80	-0.1
3,673,489	-		Echvi_3078	0.80	-1.7
3,673,489	-		Echvi_3078	0.80	-0.5
3,673,494	+		Echvi_3078	0.80	+0.4
3,673,494	+		Echvi_3078	0.80	+0.8
3,673,495	-		Echvi_3078	0.80	-1.2
3,673,498	+		Echvi_3078	0.80	-0.7
3,673,499	-		Echvi_3078	0.80	-2.2
3,673,536	+		Echvi_3078	0.83	+1.0
3,673,536	+		Echvi_3078	0.83	+0.2
3,673,537	-		Echvi_3078	0.83	+0.5
3,673,690	+				+0.8
3,673,690	+				-1.3
3,673,690	+				-2.7
3,673,698	-				-0.1
3,673,782	+				-0.7
3,673,865	+				-0.5
3,673,870	-				+0.1
3,673,878	+				-1.0
3,673,878	+				+0.1
3,673,921	-				-1.2
3,673,940	+				-0.6
3,673,945	-				-0.4
3,673,960	-				+0.1
3,673,972	+				+0.2
3,673,976	+				+1.3
3,673,981	-				+0.6
3,674,001	+				-0.5
3,674,014	+				+0.2
3,674,058	-				-0.1
3,674,124	+				-1.2
3,674,124	+				-1.2
3,674,124	+				-0.9
3,674,124	+				+0.1
3,674,125	-		Echvi_3079	0.10	-0.9
3,674,125	-		Echvi_3079	0.10	-0.1
3,674,377	+		Echvi_3079	0.25	+1.1
3,674,377	+		Echvi_3079	0.25	-0.5
3,674,378	-		Echvi_3079	0.25	-0.8
3,674,410	+		Echvi_3079	0.27	+0.8
3,674,411	-		Echvi_3079	0.27	-1.9
3,674,411	-		Echvi_3079	0.27	-0.4
3,674,412	+		Echvi_3079	0.27	-0.3
3,674,413	-		Echvi_3079	0.27	-0.7
3,674,500	+		Echvi_3079	0.32	+0.2
3,674,576	+		Echvi_3079	0.37	+0.6
3,674,576	+		Echvi_3079	0.37	+0.2
3,674,578	+		Echvi_3079	0.37	+0.5
3,674,578	+		Echvi_3079	0.37	-0.0
3,674,579	-		Echvi_3079	0.37	-0.7
3,674,579	-		Echvi_3079	0.37	+0.3
3,674,579	-		Echvi_3079	0.37	-0.1
3,674,590	+		Echvi_3079	0.37	-0.3
3,674,591	-		Echvi_3079	0.37	+2.1
3,674,611	-		Echvi_3079	0.39	+0.2
3,674,611	-		Echvi_3079	0.39	+0.5
3,674,680	+		Echvi_3079	0.43	+0.3
3,674,704	+		Echvi_3079	0.44	-0.6
3,674,705	-		Echvi_3079	0.44	+0.2
3,674,773	+		Echvi_3079	0.48	+3.2
3,674,792	+		Echvi_3079	0.49	+0.3