Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_21445

Experiment: m.b. Dimethyl Sulfoxide 10 vol%

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_21440 and CA264_21445 are separated by 21 nucleotidesCA264_21445 and CA264_21450 overlap by 14 nucleotides CA264_21440: CA264_21440 - metal transporter, at 153,030 to 154,310 _21440 CA264_21445: CA264_21445 - metal transporter, at 154,332 to 156,236 _21445 CA264_21450: CA264_21450 - hypothetical protein, at 156,223 to 157,485 _21450 Position (kb) 154 155 156 157Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 153.456 kb on - strand, within CA264_21440at 153.619 kb on - strand, within CA264_21440at 153.765 kb on - strand, within CA264_21440at 153.940 kb on - strand, within CA264_21440at 154.011 kb on - strand, within CA264_21440at 154.185 kb on - strandat 154.341 kb on + strandat 154.428 kb on - strandat 154.428 kb on - strandat 154.545 kb on - strand, within CA264_21445at 154.637 kb on + strand, within CA264_21445at 154.638 kb on - strand, within CA264_21445at 154.923 kb on - strand, within CA264_21445at 155.224 kb on - strand, within CA264_21445at 155.308 kb on + strand, within CA264_21445at 155.388 kb on - strand, within CA264_21445at 156.235 kb on - strandat 156.505 kb on - strand, within CA264_21450at 156.505 kb on - strand, within CA264_21450at 156.526 kb on - strand, within CA264_21450at 156.611 kb on - strand, within CA264_21450at 156.613 kb on - strand, within CA264_21450at 156.613 kb on - strand, within CA264_21450at 156.644 kb on - strand, within CA264_21450at 156.700 kb on - strand, within CA264_21450at 156.710 kb on - strand, within CA264_21450at 156.732 kb on - strand, within CA264_21450at 156.745 kb on - strand, within CA264_21450

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 10 vol%
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153,456 - CA264_21440 0.33 +0.0
153,619 - CA264_21440 0.46 +1.2
153,765 - CA264_21440 0.57 +0.8
153,940 - CA264_21440 0.71 -0.3
154,011 - CA264_21440 0.77 -0.5
154,185 - -0.6
154,341 + -0.6
154,428 - -0.8
154,428 - -0.2
154,545 - CA264_21445 0.11 -0.9
154,637 + CA264_21445 0.16 +0.1
154,638 - CA264_21445 0.16 -1.3
154,923 - CA264_21445 0.31 -1.3
155,224 - CA264_21445 0.47 -0.5
155,308 + CA264_21445 0.51 -1.3
155,388 - CA264_21445 0.55 +1.5
156,235 - -0.0
156,505 - CA264_21450 0.22 -0.6
156,505 - CA264_21450 0.22 +2.3
156,526 - CA264_21450 0.24 -0.3
156,611 - CA264_21450 0.31 -0.3
156,613 - CA264_21450 0.31 +0.6
156,613 - CA264_21450 0.31 -0.3
156,644 - CA264_21450 0.33 +1.3
156,700 - CA264_21450 0.38 -0.0
156,710 - CA264_21450 0.39 +0.2
156,732 - CA264_21450 0.40 -3.0
156,745 - CA264_21450 0.41 -0.1

Or see this region's nucleotide sequence