Experiment: m.b. Dimethyl Sulfoxide 10 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_21275 and CA264_21280 are separated by 38 nucleotides CA264_21280 and CA264_21285 are separated by 62 nucleotides CA264_21285 and CA264_21290 are separated by 12 nucleotides CA264_21290 and CA264_21295 are separated by 23 nucleotides
CA264_21275: CA264_21275 - hypothetical protein, at 122,195 to 122,824
_21275
CA264_21280: CA264_21280 - hypothetical protein, at 122,863 to 123,234
_21280
CA264_21285: CA264_21285 - hypothetical protein, at 123,297 to 123,764
_21285
CA264_21290: CA264_21290 - SCO family protein, at 123,777 to 124,433
_21290
CA264_21295: CA264_21295 - hypothetical protein, at 124,457 to 124,855
_21295
Position (kb) 123
124 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 122.453 kb on + strand, within CA264_21275 at 122.454 kb on - strand, within CA264_21275 at 122.464 kb on - strand, within CA264_21275 at 122.822 kb on + strand at 122.852 kb on - strand at 122.879 kb on + strand at 122.892 kb on + strand at 122.938 kb on - strand, within CA264_21280 at 122.938 kb on - strand, within CA264_21280 at 122.958 kb on - strand, within CA264_21280 at 123.100 kb on + strand, within CA264_21280 at 123.163 kb on - strand, within CA264_21280 at 123.174 kb on - strand, within CA264_21280 at 123.194 kb on - strand, within CA264_21280 at 123.319 kb on - strand at 123.323 kb on - strand at 123.329 kb on + strand at 123.449 kb on - strand, within CA264_21285 at 123.449 kb on - strand, within CA264_21285 at 123.456 kb on - strand, within CA264_21285 at 123.456 kb on - strand, within CA264_21285 at 123.491 kb on - strand, within CA264_21285 at 123.759 kb on - strand at 123.804 kb on + strand at 123.923 kb on + strand, within CA264_21290 at 123.923 kb on + strand, within CA264_21290 at 124.069 kb on - strand, within CA264_21290 at 124.077 kb on + strand, within CA264_21290 at 124.077 kb on + strand, within CA264_21290 at 124.077 kb on + strand, within CA264_21290 at 124.078 kb on - strand, within CA264_21290 at 124.144 kb on + strand, within CA264_21290 at 124.313 kb on - strand, within CA264_21290 at 124.431 kb on + strand at 124.449 kb on + strand at 124.450 kb on - strand at 124.548 kb on - strand, within CA264_21295 at 124.710 kb on - strand, within CA264_21295 at 124.710 kb on - strand, within CA264_21295
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 10 vol% remove 122,453 + CA264_21275 0.41 +0.1 122,454 - CA264_21275 0.41 +0.7 122,464 - CA264_21275 0.43 -0.4 122,822 + -0.6 122,852 - -0.3 122,879 + -0.8 122,892 + +0.3 122,938 - CA264_21280 0.20 +0.0 122,938 - CA264_21280 0.20 -0.3 122,958 - CA264_21280 0.26 +0.0 123,100 + CA264_21280 0.64 -0.9 123,163 - CA264_21280 0.81 -1.0 123,174 - CA264_21280 0.84 -0.5 123,194 - CA264_21280 0.89 -0.4 123,319 - +1.5 123,323 - -1.9 123,329 + -0.3 123,449 - CA264_21285 0.32 -0.9 123,449 - CA264_21285 0.32 +0.7 123,456 - CA264_21285 0.34 -0.3 123,456 - CA264_21285 0.34 +0.5 123,491 - CA264_21285 0.41 -0.5 123,759 - +0.3 123,804 + -0.2 123,923 + CA264_21290 0.22 -1.6 123,923 + CA264_21290 0.22 +0.1 124,069 - CA264_21290 0.44 -1.5 124,077 + CA264_21290 0.46 -2.7 124,077 + CA264_21290 0.46 -1.3 124,077 + CA264_21290 0.46 -3.2 124,078 - CA264_21290 0.46 -0.2 124,144 + CA264_21290 0.56 -1.2 124,313 - CA264_21290 0.82 -2.1 124,431 + +0.2 124,449 + -1.8 124,450 - -0.6 124,548 - CA264_21295 0.23 -1.7 124,710 - CA264_21295 0.63 -0.9 124,710 - CA264_21295 0.63 +0.1
Or see this region's nucleotide sequence