Experiment: m.b. Dimethyl Sulfoxide 10 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_20970 and CA264_20975 are separated by 154 nucleotides CA264_20975 and CA264_20980 are separated by 24 nucleotides CA264_20980 and CA264_20985 are separated by 3 nucleotides CA264_20985 and CA264_20990 are separated by 48 nucleotides
CA264_20970: CA264_20970 - hypothetical protein, at 57,736 to 58,233
_20970
CA264_20975: CA264_20975 - hypothetical protein, at 58,388 to 58,798
_20975
CA264_20980: CA264_20980 - conjugal transfer protein, at 58,823 to 59,116
_20980
CA264_20985: CA264_20985 - DUF4133 domain-containing protein, at 59,120 to 59,422
_20985
CA264_20990: CA264_20990 - conjugal transfer protein TraG, at 59,471 to 61,915
_20990
Position (kb)
59
60 Strain fitness (log2 ratio)
-2
-1
0
1 at 58.279 kb on + strand at 58.298 kb on + strand at 58.298 kb on + strand at 58.330 kb on + strand at 58.349 kb on + strand at 58.387 kb on + strand at 58.427 kb on + strand at 58.427 kb on + strand at 58.427 kb on + strand at 58.448 kb on - strand, within CA264_20975 at 58.467 kb on - strand, within CA264_20975 at 58.537 kb on + strand, within CA264_20975 at 58.576 kb on - strand, within CA264_20975 at 58.607 kb on + strand, within CA264_20975 at 58.702 kb on + strand, within CA264_20975 at 58.703 kb on - strand, within CA264_20975 at 58.733 kb on - strand, within CA264_20975 at 58.735 kb on - strand, within CA264_20975 at 58.783 kb on - strand at 58.822 kb on + strand at 58.834 kb on - strand at 58.840 kb on + strand at 58.841 kb on - strand at 58.841 kb on - strand at 58.950 kb on + strand, within CA264_20980 at 58.950 kb on + strand, within CA264_20980 at 59.000 kb on + strand, within CA264_20980 at 59.000 kb on + strand, within CA264_20980 at 59.001 kb on - strand, within CA264_20980 at 59.114 kb on + strand at 59.135 kb on - strand at 59.147 kb on - strand at 59.147 kb on - strand at 59.147 kb on - strand at 59.197 kb on + strand, within CA264_20985 at 59.198 kb on - strand, within CA264_20985 at 59.201 kb on + strand, within CA264_20985 at 59.201 kb on + strand, within CA264_20985 at 59.202 kb on - strand, within CA264_20985 at 59.202 kb on - strand, within CA264_20985 at 59.202 kb on - strand, within CA264_20985 at 59.203 kb on + strand, within CA264_20985 at 59.204 kb on - strand, within CA264_20985 at 59.204 kb on - strand, within CA264_20985 at 59.207 kb on + strand, within CA264_20985 at 59.208 kb on - strand, within CA264_20985 at 59.208 kb on - strand, within CA264_20985 at 59.326 kb on + strand, within CA264_20985 at 59.381 kb on + strand, within CA264_20985 at 59.381 kb on + strand, within CA264_20985 at 59.421 kb on - strand at 59.498 kb on + strand at 59.498 kb on + strand at 59.499 kb on - strand at 59.499 kb on - strand at 59.528 kb on - strand at 59.532 kb on + strand at 59.532 kb on + strand at 59.532 kb on + strand at 59.532 kb on + strand at 59.534 kb on + strand at 59.534 kb on + strand at 59.612 kb on + strand at 59.613 kb on - strand at 59.666 kb on + strand at 59.667 kb on - strand at 59.667 kb on - strand at 59.667 kb on - strand at 59.669 kb on - strand at 59.688 kb on + strand at 59.688 kb on + strand at 59.688 kb on + strand at 59.689 kb on - strand at 59.689 kb on - strand at 59.689 kb on - strand at 59.689 kb on - strand at 59.776 kb on - strand, within CA264_20990 at 59.776 kb on - strand, within CA264_20990 at 59.785 kb on + strand, within CA264_20990 at 59.785 kb on + strand, within CA264_20990 at 59.798 kb on - strand, within CA264_20990 at 59.830 kb on + strand, within CA264_20990 at 59.830 kb on + strand, within CA264_20990 at 59.830 kb on + strand, within CA264_20990 at 59.830 kb on + strand, within CA264_20990 at 59.830 kb on + strand, within CA264_20990 at 59.830 kb on + strand, within CA264_20990 at 59.831 kb on - strand, within CA264_20990 at 59.834 kb on + strand, within CA264_20990 at 59.835 kb on - strand, within CA264_20990 at 59.915 kb on + strand, within CA264_20990 at 59.916 kb on - strand, within CA264_20990 at 59.948 kb on - strand, within CA264_20990 at 59.987 kb on + strand, within CA264_20990 at 60.069 kb on + strand, within CA264_20990 at 60.070 kb on - strand, within CA264_20990 at 60.070 kb on - strand, within CA264_20990 at 60.098 kb on - strand, within CA264_20990 at 60.098 kb on - strand, within CA264_20990 at 60.125 kb on + strand, within CA264_20990 at 60.189 kb on - strand, within CA264_20990 at 60.237 kb on + strand, within CA264_20990 at 60.238 kb on - strand, within CA264_20990 at 60.302 kb on - strand, within CA264_20990 at 60.351 kb on - strand, within CA264_20990 at 60.359 kb on + strand, within CA264_20990 at 60.393 kb on + strand, within CA264_20990 at 60.394 kb on - strand, within CA264_20990 at 60.395 kb on + strand, within CA264_20990 at 60.395 kb on + strand, within CA264_20990 at 60.396 kb on - strand, within CA264_20990 at 60.396 kb on - strand, within CA264_20990 at 60.406 kb on + strand, within CA264_20990 at 60.410 kb on + strand, within CA264_20990
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 10 vol% remove 58,279 + +0.3 58,298 + +1.1 58,298 + +0.2 58,330 + +0.9 58,349 + -0.3 58,387 + +0.9 58,427 + -0.1 58,427 + +0.4 58,427 + -0.1 58,448 - CA264_20975 0.15 -2.1 58,467 - CA264_20975 0.19 +0.2 58,537 + CA264_20975 0.36 +0.7 58,576 - CA264_20975 0.46 +0.6 58,607 + CA264_20975 0.53 +0.4 58,702 + CA264_20975 0.76 -0.5 58,703 - CA264_20975 0.77 +0.9 58,733 - CA264_20975 0.84 +0.7 58,735 - CA264_20975 0.84 -0.6 58,783 - -0.3 58,822 + +0.3 58,834 - +0.4 58,840 + +0.1 58,841 - -0.1 58,841 - +1.7 58,950 + CA264_20980 0.43 +0.7 58,950 + CA264_20980 0.43 +0.4 59,000 + CA264_20980 0.60 +1.3 59,000 + CA264_20980 0.60 -0.3 59,001 - CA264_20980 0.61 -1.6 59,114 + -0.4 59,135 - -0.6 59,147 - +0.5 59,147 - +0.4 59,147 - +0.5 59,197 + CA264_20985 0.25 -1.0 59,198 - CA264_20985 0.26 -2.1 59,201 + CA264_20985 0.27 -0.6 59,201 + CA264_20985 0.27 -1.7 59,202 - CA264_20985 0.27 -0.9 59,202 - CA264_20985 0.27 -0.3 59,202 - CA264_20985 0.27 -0.6 59,203 + CA264_20985 0.27 -0.7 59,204 - CA264_20985 0.28 -0.3 59,204 - CA264_20985 0.28 -0.6 59,207 + CA264_20985 0.29 +0.2 59,208 - CA264_20985 0.29 +0.7 59,208 - CA264_20985 0.29 -0.4 59,326 + CA264_20985 0.68 -0.2 59,381 + CA264_20985 0.86 -0.1 59,381 + CA264_20985 0.86 +0.7 59,421 - -0.5 59,498 + +0.7 59,498 + -0.0 59,499 - +1.5 59,499 - +0.2 59,528 - +0.2 59,532 + -0.4 59,532 + +0.1 59,532 + -0.2 59,532 + -0.2 59,534 + -0.1 59,534 + +1.0 59,612 + -0.9 59,613 - -1.2 59,666 + -0.2 59,667 - -0.3 59,667 - +0.1 59,667 - +0.1 59,669 - +0.4 59,688 + +0.3 59,688 + +0.7 59,688 + +0.7 59,689 - -0.0 59,689 - -1.6 59,689 - +0.2 59,689 - -0.7 59,776 - CA264_20990 0.12 +0.5 59,776 - CA264_20990 0.12 -0.1 59,785 + CA264_20990 0.13 -1.9 59,785 + CA264_20990 0.13 -1.0 59,798 - CA264_20990 0.13 -0.3 59,830 + CA264_20990 0.15 -0.9 59,830 + CA264_20990 0.15 +0.5 59,830 + CA264_20990 0.15 +0.4 59,830 + CA264_20990 0.15 +1.0 59,830 + CA264_20990 0.15 -0.4 59,830 + CA264_20990 0.15 +0.3 59,831 - CA264_20990 0.15 +1.6 59,834 + CA264_20990 0.15 -0.3 59,835 - CA264_20990 0.15 +1.0 59,915 + CA264_20990 0.18 +0.2 59,916 - CA264_20990 0.18 -0.3 59,948 - CA264_20990 0.20 +0.4 59,987 + CA264_20990 0.21 -2.5 60,069 + CA264_20990 0.24 +0.6 60,070 - CA264_20990 0.24 -0.6 60,070 - CA264_20990 0.24 +0.1 60,098 - CA264_20990 0.26 +0.7 60,098 - CA264_20990 0.26 -0.8 60,125 + CA264_20990 0.27 +1.1 60,189 - CA264_20990 0.29 -0.5 60,237 + CA264_20990 0.31 +0.2 60,238 - CA264_20990 0.31 +0.5 60,302 - CA264_20990 0.34 +1.7 60,351 - CA264_20990 0.36 -0.5 60,359 + CA264_20990 0.36 -0.0 60,393 + CA264_20990 0.38 +0.9 60,394 - CA264_20990 0.38 +0.9 60,395 + CA264_20990 0.38 -0.6 60,395 + CA264_20990 0.38 +0.7 60,396 - CA264_20990 0.38 -1.1 60,396 - CA264_20990 0.38 +0.3 60,406 + CA264_20990 0.38 +0.5 60,410 + CA264_20990 0.38 -0.9
Or see this region's nucleotide sequence