Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_20715
Experiment: m.b. Dimethyl Sulfoxide 10 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | m.b. Dimethyl Sulfoxide 10 vol% |
|---|---|---|---|---|---|
| remove | |||||
| 4,768,778 | + | +0.1 | |||
| 4,768,833 | + | -1.1 | |||
| 4,768,834 | - | -1.0 | |||
| 4,768,834 | - | -0.5 | |||
| 4,768,834 | - | +1.1 | |||
| 4,768,844 | - | -1.4 | |||
| 4,768,847 | + | +0.3 | |||
| 4,768,887 | + | -0.9 | |||
| 4,768,906 | - | +0.1 | |||
| 4,768,906 | - | -0.5 | |||
| 4,768,955 | + | +0.5 | |||
| 4,768,961 | + | -0.9 | |||
| 4,768,962 | - | -1.2 | |||
| 4,769,092 | - | CA264_20710 | 0.17 | -0.3 | |
| 4,769,141 | + | CA264_20710 | 0.23 | -2.2 | |
| 4,769,162 | + | CA264_20710 | 0.26 | -1.7 | |
| 4,769,293 | - | CA264_20710 | 0.43 | -1.3 | |
| 4,769,405 | + | CA264_20710 | 0.58 | -1.1 | |
| 4,769,496 | + | CA264_20710 | 0.70 | -2.6 | |
| 4,769,497 | - | CA264_20710 | 0.70 | -0.8 | |
| 4,769,536 | - | CA264_20710 | 0.75 | +0.3 | |
| 4,769,652 | - | -0.3 | |||
| 4,769,691 | + | -0.1 | |||
| 4,769,692 | - | -0.2 | |||
| 4,769,936 | - | CA264_20715 | 0.22 | -0.5 | |
| 4,770,009 | - | CA264_20715 | 0.30 | -0.7 | |
| 4,770,062 | + | CA264_20715 | 0.35 | -1.1 | |
| 4,770,063 | - | CA264_20715 | 0.35 | +0.2 | |
| 4,770,346 | - | CA264_20715 | 0.66 | -1.0 | |
| 4,770,364 | + | CA264_20715 | 0.68 | -1.0 | |
| 4,770,365 | - | CA264_20715 | 0.68 | -1.1 | |
| 4,770,736 | - | +0.3 |
Or see this region's nucleotide sequence