Experiment: m.b. Dimethyl Sulfoxide 10 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_20540 and CA264_20545 are separated by 79 nucleotides CA264_20545 and CA264_20550 are separated by 129 nucleotides CA264_20550 and CA264_20555 overlap by 8 nucleotides
CA264_20540: CA264_20540 - transglycosylase, at 4,731,433 to 4,733,763
_20540
CA264_20545: CA264_20545 - epimerase, at 4,733,843 to 4,734,760
_20545
CA264_20550: CA264_20550 - GTP cyclohydrolase I FolE, at 4,734,890 to 4,735,558
_20550
CA264_20555: CA264_20555 - 6-pyruvoyl tetrahydrobiopterin synthase, at 4,735,551 to 4,735,958
_20555
Position (kb)
4733
4734
4735 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 4732.858 kb on - strand, within CA264_20540 at 4732.871 kb on - strand, within CA264_20540 at 4732.908 kb on + strand, within CA264_20540 at 4732.939 kb on + strand, within CA264_20540 at 4732.939 kb on + strand, within CA264_20540 at 4732.939 kb on + strand, within CA264_20540 at 4732.940 kb on - strand, within CA264_20540 at 4732.940 kb on - strand, within CA264_20540 at 4732.993 kb on + strand, within CA264_20540 at 4733.007 kb on + strand, within CA264_20540 at 4733.073 kb on - strand, within CA264_20540 at 4733.073 kb on - strand, within CA264_20540 at 4733.073 kb on - strand, within CA264_20540 at 4733.095 kb on + strand, within CA264_20540 at 4733.103 kb on + strand, within CA264_20540 at 4733.108 kb on + strand, within CA264_20540 at 4733.108 kb on + strand, within CA264_20540 at 4733.109 kb on - strand, within CA264_20540 at 4733.191 kb on + strand, within CA264_20540 at 4733.191 kb on + strand, within CA264_20540 at 4733.192 kb on - strand, within CA264_20540 at 4733.229 kb on + strand, within CA264_20540 at 4733.230 kb on - strand, within CA264_20540 at 4733.235 kb on + strand, within CA264_20540 at 4733.461 kb on + strand, within CA264_20540 at 4733.461 kb on + strand, within CA264_20540 at 4733.462 kb on - strand, within CA264_20540 at 4733.556 kb on + strand at 4733.556 kb on + strand at 4733.623 kb on - strand at 4733.623 kb on - strand at 4733.671 kb on - strand at 4733.826 kb on + strand at 4733.828 kb on + strand at 4733.833 kb on + strand at 4733.834 kb on - strand at 4733.839 kb on - strand at 4733.889 kb on + strand at 4733.896 kb on - strand at 4733.957 kb on - strand, within CA264_20545 at 4734.053 kb on - strand, within CA264_20545 at 4734.129 kb on - strand, within CA264_20545 at 4734.171 kb on + strand, within CA264_20545 at 4734.171 kb on + strand, within CA264_20545 at 4734.172 kb on - strand, within CA264_20545 at 4734.172 kb on - strand, within CA264_20545 at 4734.287 kb on + strand, within CA264_20545 at 4734.361 kb on - strand, within CA264_20545 at 4734.437 kb on + strand, within CA264_20545 at 4734.437 kb on + strand, within CA264_20545 at 4734.438 kb on - strand, within CA264_20545 at 4734.542 kb on + strand, within CA264_20545 at 4734.542 kb on + strand, within CA264_20545 at 4734.568 kb on + strand, within CA264_20545 at 4734.568 kb on + strand, within CA264_20545 at 4734.569 kb on - strand, within CA264_20545 at 4734.570 kb on + strand, within CA264_20545 at 4734.570 kb on + strand, within CA264_20545 at 4734.571 kb on - strand, within CA264_20545 at 4734.571 kb on - strand, within CA264_20545 at 4734.599 kb on + strand, within CA264_20545 at 4734.600 kb on - strand, within CA264_20545 at 4734.600 kb on - strand, within CA264_20545 at 4734.602 kb on - strand, within CA264_20545 at 4734.634 kb on + strand, within CA264_20545 at 4734.635 kb on - strand, within CA264_20545 at 4734.720 kb on - strand at 4734.761 kb on - strand at 4734.761 kb on - strand at 4734.769 kb on - strand at 4734.790 kb on + strand at 4734.796 kb on - strand at 4734.813 kb on - strand at 4734.813 kb on - strand at 4734.830 kb on + strand at 4734.836 kb on - strand at 4734.878 kb on - strand at 4734.878 kb on - strand at 4735.182 kb on + strand, within CA264_20550 at 4735.561 kb on + strand at 4735.562 kb on - strand at 4735.562 kb on - strand at 4735.588 kb on + strand at 4735.589 kb on - strand at 4735.595 kb on + strand, within CA264_20555 at 4735.595 kb on + strand, within CA264_20555
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 10 vol% remove 4,732,858 - CA264_20540 0.61 +1.7 4,732,871 - CA264_20540 0.62 -0.5 4,732,908 + CA264_20540 0.63 -0.5 4,732,939 + CA264_20540 0.65 -0.1 4,732,939 + CA264_20540 0.65 -0.6 4,732,939 + CA264_20540 0.65 +0.2 4,732,940 - CA264_20540 0.65 +1.4 4,732,940 - CA264_20540 0.65 +0.5 4,732,993 + CA264_20540 0.67 -0.9 4,733,007 + CA264_20540 0.68 +0.1 4,733,073 - CA264_20540 0.70 +0.6 4,733,073 - CA264_20540 0.70 +1.9 4,733,073 - CA264_20540 0.70 -0.8 4,733,095 + CA264_20540 0.71 -0.5 4,733,103 + CA264_20540 0.72 +0.4 4,733,108 + CA264_20540 0.72 +2.1 4,733,108 + CA264_20540 0.72 -0.4 4,733,109 - CA264_20540 0.72 -0.9 4,733,191 + CA264_20540 0.75 -0.4 4,733,191 + CA264_20540 0.75 -0.8 4,733,192 - CA264_20540 0.75 -0.9 4,733,229 + CA264_20540 0.77 -0.2 4,733,230 - CA264_20540 0.77 -0.3 4,733,235 + CA264_20540 0.77 -0.1 4,733,461 + CA264_20540 0.87 +0.4 4,733,461 + CA264_20540 0.87 -0.9 4,733,462 - CA264_20540 0.87 -2.9 4,733,556 + -1.0 4,733,556 + +0.5 4,733,623 - -0.5 4,733,623 - -1.0 4,733,671 - +0.2 4,733,826 + +0.0 4,733,828 + +0.6 4,733,833 + +0.8 4,733,834 - -0.1 4,733,839 - +1.0 4,733,889 + +1.1 4,733,896 - -1.2 4,733,957 - CA264_20545 0.12 -0.6 4,734,053 - CA264_20545 0.23 -0.0 4,734,129 - CA264_20545 0.31 -1.5 4,734,171 + CA264_20545 0.36 -0.5 4,734,171 + CA264_20545 0.36 -0.8 4,734,172 - CA264_20545 0.36 +3.0 4,734,172 - CA264_20545 0.36 +1.1 4,734,287 + CA264_20545 0.48 -1.2 4,734,361 - CA264_20545 0.56 -0.2 4,734,437 + CA264_20545 0.65 -1.5 4,734,437 + CA264_20545 0.65 -0.5 4,734,438 - CA264_20545 0.65 -0.5 4,734,542 + CA264_20545 0.76 -2.8 4,734,542 + CA264_20545 0.76 -1.9 4,734,568 + CA264_20545 0.79 -1.1 4,734,568 + CA264_20545 0.79 -1.3 4,734,569 - CA264_20545 0.79 -0.2 4,734,570 + CA264_20545 0.79 -2.5 4,734,570 + CA264_20545 0.79 -1.7 4,734,571 - CA264_20545 0.79 -1.2 4,734,571 - CA264_20545 0.79 -0.2 4,734,599 + CA264_20545 0.82 -1.7 4,734,600 - CA264_20545 0.82 +1.1 4,734,600 - CA264_20545 0.82 -0.5 4,734,602 - CA264_20545 0.83 -2.5 4,734,634 + CA264_20545 0.86 -1.2 4,734,635 - CA264_20545 0.86 -0.0 4,734,720 - -0.9 4,734,761 - -0.5 4,734,761 - +0.1 4,734,769 - -0.3 4,734,790 + -1.7 4,734,796 - -1.4 4,734,813 - -1.2 4,734,813 - +1.5 4,734,830 + -3.5 4,734,836 - -0.7 4,734,878 - -0.8 4,734,878 - -1.5 4,735,182 + CA264_20550 0.44 +0.1 4,735,561 + -0.2 4,735,562 - -1.0 4,735,562 - -0.5 4,735,588 + +0.5 4,735,589 - +1.1 4,735,595 + CA264_20555 0.11 +0.3 4,735,595 + CA264_20555 0.11 -0.6
Or see this region's nucleotide sequence