Experiment: m.b. Dimethyl Sulfoxide 10 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_18335 and CA264_18340 are separated by 259 nucleotides CA264_18340 and CA264_18345 are separated by 87 nucleotides CA264_18345 and CA264_18350 are separated by 76 nucleotides CA264_18350 and CA264_18355 are separated by 20 nucleotides
CA264_18335: CA264_18335 - peptidase M16, at 4,262,099 to 4,263,358
_18335
CA264_18340: CA264_18340 - dehydrogenase, at 4,263,618 to 4,265,597
_18340
CA264_18345: CA264_18345 - hypothetical protein, at 4,265,685 to 4,265,894
_18345
CA264_18350: CA264_18350 - hypothetical protein, at 4,265,971 to 4,266,297
_18350
CA264_18355: CA264_18355 - thioredoxin family protein, at 4,266,318 to 4,266,659
_18355
Position (kb)
4263
4264
4265
4266 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 4262.620 kb on - strand, within CA264_18335 at 4262.628 kb on + strand, within CA264_18335 at 4262.628 kb on + strand, within CA264_18335 at 4262.629 kb on - strand, within CA264_18335 at 4262.629 kb on - strand, within CA264_18335 at 4262.657 kb on + strand, within CA264_18335 at 4262.657 kb on + strand, within CA264_18335 at 4262.713 kb on - strand, within CA264_18335 at 4262.713 kb on - strand, within CA264_18335 at 4262.713 kb on - strand, within CA264_18335 at 4262.799 kb on - strand, within CA264_18335 at 4262.817 kb on + strand, within CA264_18335 at 4262.818 kb on - strand, within CA264_18335 at 4262.867 kb on - strand, within CA264_18335 at 4262.902 kb on - strand, within CA264_18335 at 4262.916 kb on + strand, within CA264_18335 at 4262.917 kb on - strand, within CA264_18335 at 4262.917 kb on - strand, within CA264_18335 at 4262.967 kb on + strand, within CA264_18335 at 4262.993 kb on + strand, within CA264_18335 at 4263.043 kb on + strand, within CA264_18335 at 4263.044 kb on - strand, within CA264_18335 at 4263.102 kb on + strand, within CA264_18335 at 4263.103 kb on - strand, within CA264_18335 at 4263.103 kb on - strand, within CA264_18335 at 4263.264 kb on + strand at 4263.269 kb on + strand at 4263.270 kb on - strand at 4263.328 kb on + strand at 4263.329 kb on - strand at 4263.354 kb on - strand at 4263.359 kb on - strand at 4263.359 kb on - strand at 4263.365 kb on + strand at 4263.366 kb on - strand at 4263.383 kb on + strand at 4263.383 kb on + strand at 4263.383 kb on + strand at 4263.383 kb on + strand at 4263.383 kb on + strand at 4263.383 kb on + strand at 4263.383 kb on + strand at 4263.384 kb on - strand at 4263.384 kb on - strand at 4263.384 kb on - strand at 4263.384 kb on - strand at 4263.384 kb on - strand at 4263.387 kb on + strand at 4263.388 kb on - strand at 4263.436 kb on + strand at 4263.436 kb on + strand at 4263.459 kb on - strand at 4263.461 kb on - strand at 4263.482 kb on + strand at 4263.509 kb on + strand at 4263.516 kb on + strand at 4263.516 kb on + strand at 4263.516 kb on + strand at 4263.517 kb on - strand at 4263.517 kb on - strand at 4263.547 kb on + strand at 4263.553 kb on + strand at 4263.555 kb on + strand at 4263.566 kb on + strand at 4263.595 kb on + strand at 4263.595 kb on + strand at 4263.595 kb on + strand at 4263.596 kb on - strand at 4263.624 kb on + strand at 4263.624 kb on + strand at 4263.625 kb on - strand at 4263.625 kb on - strand at 4263.639 kb on + strand at 4263.659 kb on - strand at 4263.664 kb on + strand at 4263.664 kb on + strand at 4263.665 kb on - strand at 4263.666 kb on + strand at 4263.666 kb on + strand at 4263.675 kb on - strand at 4263.807 kb on + strand at 4264.270 kb on - strand, within CA264_18340 at 4264.380 kb on + strand, within CA264_18340 at 4264.380 kb on + strand, within CA264_18340 at 4264.381 kb on - strand, within CA264_18340 at 4264.487 kb on + strand, within CA264_18340 at 4264.513 kb on + strand, within CA264_18340 at 4264.514 kb on - strand, within CA264_18340 at 4264.587 kb on + strand, within CA264_18340 at 4264.587 kb on + strand, within CA264_18340 at 4264.587 kb on + strand, within CA264_18340 at 4264.588 kb on - strand, within CA264_18340 at 4264.588 kb on - strand, within CA264_18340 at 4264.588 kb on - strand, within CA264_18340 at 4264.588 kb on - strand, within CA264_18340 at 4264.588 kb on - strand, within CA264_18340 at 4264.682 kb on + strand, within CA264_18340 at 4264.721 kb on + strand, within CA264_18340 at 4264.722 kb on - strand, within CA264_18340 at 4264.731 kb on + strand, within CA264_18340 at 4264.745 kb on + strand, within CA264_18340 at 4264.867 kb on + strand, within CA264_18340 at 4265.190 kb on + strand, within CA264_18340 at 4265.190 kb on + strand, within CA264_18340 at 4265.246 kb on + strand, within CA264_18340 at 4265.246 kb on + strand, within CA264_18340 at 4265.246 kb on + strand, within CA264_18340 at 4265.246 kb on + strand, within CA264_18340 at 4265.247 kb on - strand, within CA264_18340 at 4265.247 kb on - strand, within CA264_18340 at 4265.254 kb on - strand, within CA264_18340 at 4265.254 kb on - strand, within CA264_18340 at 4265.296 kb on + strand, within CA264_18340 at 4265.311 kb on + strand, within CA264_18340 at 4265.311 kb on + strand, within CA264_18340 at 4265.312 kb on - strand, within CA264_18340 at 4265.312 kb on - strand, within CA264_18340 at 4265.317 kb on + strand, within CA264_18340 at 4265.424 kb on - strand at 4265.425 kb on + strand at 4265.593 kb on - strand at 4265.690 kb on + strand at 4265.692 kb on + strand at 4265.711 kb on + strand, within CA264_18345 at 4265.711 kb on + strand, within CA264_18345 at 4265.893 kb on - strand at 4266.109 kb on + strand, within CA264_18350 at 4266.110 kb on - strand, within CA264_18350 at 4266.139 kb on + strand, within CA264_18350 at 4266.140 kb on - strand, within CA264_18350 at 4266.141 kb on + strand, within CA264_18350 at 4266.141 kb on + strand, within CA264_18350 at 4266.141 kb on + strand, within CA264_18350 at 4266.142 kb on - strand, within CA264_18350 at 4266.142 kb on - strand, within CA264_18350 at 4266.142 kb on - strand, within CA264_18350 at 4266.200 kb on - strand, within CA264_18350 at 4266.291 kb on + strand at 4266.295 kb on + strand at 4266.398 kb on + strand, within CA264_18355 at 4266.399 kb on - strand, within CA264_18355 at 4266.399 kb on - strand, within CA264_18355 at 4266.420 kb on - strand, within CA264_18355 at 4266.490 kb on - strand, within CA264_18355 at 4266.551 kb on - strand, within CA264_18355
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 10 vol% remove 4,262,620 - CA264_18335 0.41 -0.4 4,262,628 + CA264_18335 0.42 -0.2 4,262,628 + CA264_18335 0.42 -0.2 4,262,629 - CA264_18335 0.42 +0.5 4,262,629 - CA264_18335 0.42 -0.4 4,262,657 + CA264_18335 0.44 -0.4 4,262,657 + CA264_18335 0.44 +0.1 4,262,713 - CA264_18335 0.49 -0.7 4,262,713 - CA264_18335 0.49 -0.4 4,262,713 - CA264_18335 0.49 +3.5 4,262,799 - CA264_18335 0.56 +0.4 4,262,817 + CA264_18335 0.57 +0.3 4,262,818 - CA264_18335 0.57 +0.8 4,262,867 - CA264_18335 0.61 -0.5 4,262,902 - CA264_18335 0.64 -1.8 4,262,916 + CA264_18335 0.65 -0.4 4,262,917 - CA264_18335 0.65 -2.2 4,262,917 - CA264_18335 0.65 -1.5 4,262,967 + CA264_18335 0.69 +0.6 4,262,993 + CA264_18335 0.71 +1.2 4,263,043 + CA264_18335 0.75 +0.0 4,263,044 - CA264_18335 0.75 -1.2 4,263,102 + CA264_18335 0.80 +1.2 4,263,103 - CA264_18335 0.80 +0.2 4,263,103 - CA264_18335 0.80 -0.7 4,263,264 + +2.8 4,263,269 + -0.7 4,263,270 - +0.4 4,263,328 + -0.4 4,263,329 - +0.2 4,263,354 - +0.2 4,263,359 - +0.6 4,263,359 - -0.2 4,263,365 + +0.5 4,263,366 - +2.8 4,263,383 + -0.2 4,263,383 + -0.8 4,263,383 + +0.2 4,263,383 + -0.1 4,263,383 + -0.7 4,263,383 + +1.2 4,263,383 + -1.3 4,263,384 - +0.1 4,263,384 - +0.4 4,263,384 - -0.6 4,263,384 - +0.3 4,263,384 - -0.8 4,263,387 + +0.2 4,263,388 - +1.0 4,263,436 + +0.7 4,263,436 + -0.3 4,263,459 - +0.4 4,263,461 - +0.3 4,263,482 + -1.4 4,263,509 + +0.8 4,263,516 + -1.0 4,263,516 + -2.0 4,263,516 + +1.6 4,263,517 - +0.7 4,263,517 - -0.6 4,263,547 + -0.5 4,263,553 + +0.2 4,263,555 + +0.2 4,263,566 + +1.2 4,263,595 + -0.4 4,263,595 + -0.3 4,263,595 + +0.1 4,263,596 - -0.5 4,263,624 + +0.4 4,263,624 + -0.4 4,263,625 - -0.6 4,263,625 - +0.3 4,263,639 + -0.2 4,263,659 - +0.1 4,263,664 + -0.0 4,263,664 + -0.1 4,263,665 - -0.5 4,263,666 + +0.2 4,263,666 + -0.0 4,263,675 - +3.2 4,263,807 + +0.9 4,264,270 - CA264_18340 0.33 +0.5 4,264,380 + CA264_18340 0.38 +0.4 4,264,380 + CA264_18340 0.38 +1.5 4,264,381 - CA264_18340 0.39 +1.9 4,264,487 + CA264_18340 0.44 +0.2 4,264,513 + CA264_18340 0.45 +0.1 4,264,514 - CA264_18340 0.45 +0.9 4,264,587 + CA264_18340 0.49 +0.8 4,264,587 + CA264_18340 0.49 -0.8 4,264,587 + CA264_18340 0.49 +0.2 4,264,588 - CA264_18340 0.49 -1.1 4,264,588 - CA264_18340 0.49 +1.2 4,264,588 - CA264_18340 0.49 +1.4 4,264,588 - CA264_18340 0.49 +0.3 4,264,588 - CA264_18340 0.49 +0.0 4,264,682 + CA264_18340 0.54 +1.2 4,264,721 + CA264_18340 0.56 +0.7 4,264,722 - CA264_18340 0.56 +0.8 4,264,731 + CA264_18340 0.56 -0.3 4,264,745 + CA264_18340 0.57 +0.3 4,264,867 + CA264_18340 0.63 -0.2 4,265,190 + CA264_18340 0.79 -1.8 4,265,190 + CA264_18340 0.79 +2.8 4,265,246 + CA264_18340 0.82 +0.2 4,265,246 + CA264_18340 0.82 -0.7 4,265,246 + CA264_18340 0.82 +1.2 4,265,246 + CA264_18340 0.82 +0.2 4,265,247 - CA264_18340 0.82 -0.5 4,265,247 - CA264_18340 0.82 +0.2 4,265,254 - CA264_18340 0.83 +0.1 4,265,254 - CA264_18340 0.83 -1.2 4,265,296 + CA264_18340 0.85 +0.2 4,265,311 + CA264_18340 0.86 +0.7 4,265,311 + CA264_18340 0.86 +0.3 4,265,312 - CA264_18340 0.86 -0.4 4,265,312 - CA264_18340 0.86 +0.6 4,265,317 + CA264_18340 0.86 +0.3 4,265,424 - +0.0 4,265,425 + +0.2 4,265,593 - +0.0 4,265,690 + +1.5 4,265,692 + +0.4 4,265,711 + CA264_18345 0.12 +1.5 4,265,711 + CA264_18345 0.12 +0.7 4,265,893 - -0.4 4,266,109 + CA264_18350 0.42 -0.1 4,266,110 - CA264_18350 0.43 +0.5 4,266,139 + CA264_18350 0.51 -1.1 4,266,140 - CA264_18350 0.52 +0.2 4,266,141 + CA264_18350 0.52 -0.6 4,266,141 + CA264_18350 0.52 +0.2 4,266,141 + CA264_18350 0.52 -0.4 4,266,142 - CA264_18350 0.52 +0.3 4,266,142 - CA264_18350 0.52 -0.4 4,266,142 - CA264_18350 0.52 +0.5 4,266,200 - CA264_18350 0.70 +1.2 4,266,291 + -0.6 4,266,295 + -0.2 4,266,398 + CA264_18355 0.23 +0.2 4,266,399 - CA264_18355 0.24 -1.5 4,266,399 - CA264_18355 0.24 +0.3 4,266,420 - CA264_18355 0.30 -0.4 4,266,490 - CA264_18355 0.50 -1.6 4,266,551 - CA264_18355 0.68 +0.1
Or see this region's nucleotide sequence