Experiment: m.b. Dimethyl Sulfoxide 10 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_18135 and CA264_18140 are separated by 90 nucleotides CA264_18140 and CA264_18145 are separated by 278 nucleotides CA264_18145 and CA264_18150 are separated by 368 nucleotides
CA264_18135: CA264_18135 - ABC transporter ATP-binding protein, at 4,216,841 to 4,217,566
_18135
CA264_18140: CA264_18140 - hypothetical protein, at 4,217,657 to 4,217,878
_18140
CA264_18145: CA264_18145 - ribonuclease, at 4,218,157 to 4,219,470
_18145
CA264_18150: CA264_18150 - energy-dependent translational throttle protein EttA, at 4,219,839 to 4,221,509
_18150
Position (kb)
4218
4219
4220 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4217.206 kb on + strand, within CA264_18135 at 4217.206 kb on + strand, within CA264_18135 at 4217.206 kb on + strand, within CA264_18135 at 4217.238 kb on + strand, within CA264_18135 at 4217.238 kb on + strand, within CA264_18135 at 4217.300 kb on - strand, within CA264_18135 at 4217.377 kb on + strand, within CA264_18135 at 4217.378 kb on - strand, within CA264_18135 at 4217.412 kb on - strand, within CA264_18135 at 4217.475 kb on - strand, within CA264_18135 at 4217.580 kb on - strand at 4217.607 kb on + strand at 4217.608 kb on - strand at 4217.636 kb on - strand at 4217.650 kb on - strand at 4217.662 kb on - strand at 4217.893 kb on + strand at 4217.894 kb on - strand at 4218.142 kb on - strand at 4218.146 kb on + strand at 4218.146 kb on + strand at 4218.148 kb on + strand at 4218.148 kb on + strand at 4218.148 kb on + strand at 4218.149 kb on - strand at 4218.277 kb on - strand at 4218.343 kb on - strand, within CA264_18145 at 4218.428 kb on + strand, within CA264_18145 at 4218.429 kb on - strand, within CA264_18145 at 4218.641 kb on + strand, within CA264_18145 at 4218.676 kb on + strand, within CA264_18145 at 4219.087 kb on + strand, within CA264_18145 at 4219.104 kb on + strand, within CA264_18145 at 4219.132 kb on - strand, within CA264_18145 at 4219.175 kb on + strand, within CA264_18145 at 4219.176 kb on - strand, within CA264_18145 at 4219.214 kb on - strand, within CA264_18145 at 4219.294 kb on + strand, within CA264_18145 at 4219.331 kb on + strand, within CA264_18145 at 4219.392 kb on + strand at 4219.473 kb on + strand at 4219.502 kb on - strand at 4219.532 kb on + strand at 4219.543 kb on + strand at 4219.543 kb on + strand at 4219.543 kb on + strand at 4219.735 kb on + strand at 4219.755 kb on - strand at 4219.810 kb on + strand at 4219.810 kb on + strand at 4219.812 kb on + strand at 4219.813 kb on - strand at 4219.815 kb on + strand at 4219.828 kb on + strand at 4219.910 kb on + strand at 4219.910 kb on + strand at 4219.910 kb on + strand at 4219.911 kb on - strand at 4219.918 kb on + strand at 4219.920 kb on + strand at 4219.920 kb on + strand at 4219.921 kb on - strand at 4219.921 kb on - strand at 4220.125 kb on + strand, within CA264_18150
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 10 vol% remove 4,217,206 + CA264_18135 0.50 +0.2 4,217,206 + CA264_18135 0.50 +0.4 4,217,206 + CA264_18135 0.50 -0.5 4,217,238 + CA264_18135 0.55 -0.5 4,217,238 + CA264_18135 0.55 +0.4 4,217,300 - CA264_18135 0.63 -0.9 4,217,377 + CA264_18135 0.74 -0.8 4,217,378 - CA264_18135 0.74 +0.2 4,217,412 - CA264_18135 0.79 -0.3 4,217,475 - CA264_18135 0.87 +0.2 4,217,580 - -0.3 4,217,607 + -0.5 4,217,608 - +0.5 4,217,636 - +0.0 4,217,650 - +0.5 4,217,662 - -0.1 4,217,893 + -0.1 4,217,894 - -0.4 4,218,142 - +0.4 4,218,146 + -0.4 4,218,146 + +0.2 4,218,148 + -0.9 4,218,148 + -1.1 4,218,148 + -0.0 4,218,149 - -1.0 4,218,277 - -0.5 4,218,343 - CA264_18145 0.14 -0.0 4,218,428 + CA264_18145 0.21 -0.5 4,218,429 - CA264_18145 0.21 -1.2 4,218,641 + CA264_18145 0.37 -0.8 4,218,676 + CA264_18145 0.39 -1.1 4,219,087 + CA264_18145 0.71 -0.4 4,219,104 + CA264_18145 0.72 -0.5 4,219,132 - CA264_18145 0.74 -2.6 4,219,175 + CA264_18145 0.77 -0.3 4,219,176 - CA264_18145 0.78 -1.2 4,219,214 - CA264_18145 0.80 -1.4 4,219,294 + CA264_18145 0.87 -0.9 4,219,331 + CA264_18145 0.89 -0.7 4,219,392 + +1.2 4,219,473 + +1.2 4,219,502 - +1.2 4,219,532 + -0.5 4,219,543 + -0.4 4,219,543 + -0.4 4,219,543 + -0.3 4,219,735 + +0.6 4,219,755 - +1.2 4,219,810 + -1.4 4,219,810 + -0.2 4,219,812 + -1.1 4,219,813 - -0.1 4,219,815 + +0.8 4,219,828 + +0.2 4,219,910 + -0.7 4,219,910 + +0.6 4,219,910 + +1.2 4,219,911 - +1.8 4,219,918 + -0.4 4,219,920 + -0.6 4,219,920 + -0.6 4,219,921 - -0.6 4,219,921 - +0.2 4,220,125 + CA264_18150 0.17 +0.1
Or see this region's nucleotide sequence