Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_17780
Experiment: m.b. Dimethyl Sulfoxide 10 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Dimethyl Sulfoxide 10 vol% |
---|---|---|---|---|---|
remove | |||||
4,136,204 | + | -0.8 | |||
4,136,210 | - | -1.1 | |||
4,136,215 | - | +2.8 | |||
4,136,215 | - | +0.6 | |||
4,136,215 | - | +0.8 | |||
4,136,255 | + | -0.1 | |||
4,136,429 | - | CA264_17780 | 0.39 | -0.1 | |
4,136,429 | - | CA264_17780 | 0.39 | -0.8 | |
4,136,462 | + | CA264_17780 | 0.45 | -3.2 | |
4,136,637 | + | CA264_17780 | 0.78 | -0.9 | |
4,136,644 | - | CA264_17780 | 0.79 | -0.9 | |
4,136,682 | - | CA264_17780 | 0.86 | -0.3 | |
4,136,773 | + | +0.2 | |||
4,136,786 | + | +2.2 | |||
4,136,860 | - | CA264_17785 | 0.26 | -0.5 | |
4,136,951 | - | CA264_17785 | 0.56 | +0.6 | |
4,136,951 | - | CA264_17785 | 0.56 | +0.5 | |
4,136,996 | + | CA264_17785 | 0.70 | -2.5 | |
4,136,997 | - | CA264_17785 | 0.71 | -0.3 | |
4,136,997 | - | CA264_17785 | 0.71 | +2.0 | |
4,137,079 | + | +2.8 | |||
4,137,084 | + | -2.4 | |||
4,137,121 | - | -0.1 | |||
4,137,169 | - | -1.4 | |||
4,137,729 | - | CA264_17790 | 0.64 | -1.6 |
Or see this region's nucleotide sequence