Experiment: m.b. Dimethyl Sulfoxide 10 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_16610 and CA264_16615 are separated by 514 nucleotides CA264_16615 and CA264_16620 are separated by 2 nucleotides
CA264_16610: CA264_16610 - hypothetical protein, at 3,860,451 to 3,860,951
_16610
CA264_16615: CA264_16615 - hypothetical protein, at 3,861,466 to 3,863,649
_16615
CA264_16620: CA264_16620 - hypothetical protein, at 3,863,652 to 3,865,187
_16620
Position (kb)
3861
3862
3863
3864 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 3860.547 kb on + strand, within CA264_16610 at 3860.548 kb on - strand, within CA264_16610 at 3860.608 kb on - strand, within CA264_16610 at 3860.684 kb on - strand, within CA264_16610 at 3860.720 kb on + strand, within CA264_16610 at 3860.765 kb on + strand, within CA264_16610 at 3860.766 kb on - strand, within CA264_16610 at 3860.773 kb on + strand, within CA264_16610 at 3860.774 kb on - strand, within CA264_16610 at 3860.858 kb on + strand, within CA264_16610 at 3860.858 kb on + strand, within CA264_16610 at 3860.859 kb on - strand, within CA264_16610 at 3860.862 kb on + strand, within CA264_16610 at 3860.863 kb on - strand, within CA264_16610 at 3860.871 kb on + strand, within CA264_16610 at 3860.897 kb on - strand, within CA264_16610 at 3860.919 kb on + strand at 3860.919 kb on + strand at 3860.963 kb on + strand at 3860.965 kb on + strand at 3860.966 kb on - strand at 3860.966 kb on - strand at 3860.975 kb on - strand at 3860.975 kb on - strand at 3861.010 kb on + strand at 3861.010 kb on + strand at 3861.011 kb on - strand at 3861.022 kb on - strand at 3861.092 kb on + strand at 3861.146 kb on - strand at 3861.159 kb on + strand at 3861.160 kb on - strand at 3861.161 kb on + strand at 3861.162 kb on - strand at 3861.181 kb on - strand at 3861.190 kb on - strand at 3861.190 kb on - strand at 3861.218 kb on + strand at 3861.219 kb on - strand at 3861.219 kb on - strand at 3861.219 kb on - strand at 3861.219 kb on - strand at 3861.236 kb on - strand at 3861.396 kb on - strand at 3861.396 kb on - strand at 3861.396 kb on - strand at 3861.463 kb on + strand at 3861.464 kb on - strand at 3861.464 kb on - strand at 3861.464 kb on - strand at 3861.464 kb on - strand at 3861.467 kb on + strand at 3861.467 kb on + strand at 3861.486 kb on + strand at 3861.486 kb on + strand at 3861.487 kb on - strand at 3861.487 kb on - strand at 3861.488 kb on + strand at 3861.489 kb on - strand at 3861.550 kb on + strand at 3861.551 kb on - strand at 3861.563 kb on - strand at 3861.575 kb on - strand at 3861.575 kb on - strand at 3861.575 kb on - strand at 3861.620 kb on - strand at 3861.631 kb on + strand at 3861.649 kb on + strand at 3861.740 kb on + strand, within CA264_16615 at 3861.741 kb on - strand, within CA264_16615 at 3861.741 kb on - strand, within CA264_16615 at 3861.741 kb on - strand, within CA264_16615 at 3861.775 kb on + strand, within CA264_16615 at 3861.814 kb on + strand, within CA264_16615 at 3861.914 kb on - strand, within CA264_16615 at 3861.917 kb on + strand, within CA264_16615 at 3861.918 kb on - strand, within CA264_16615 at 3861.938 kb on - strand, within CA264_16615 at 3861.965 kb on + strand, within CA264_16615 at 3861.965 kb on + strand, within CA264_16615 at 3861.966 kb on - strand, within CA264_16615 at 3861.993 kb on + strand, within CA264_16615 at 3862.009 kb on + strand, within CA264_16615 at 3862.010 kb on - strand, within CA264_16615 at 3862.216 kb on + strand, within CA264_16615 at 3862.218 kb on + strand, within CA264_16615 at 3862.218 kb on + strand, within CA264_16615 at 3862.335 kb on + strand, within CA264_16615 at 3862.335 kb on + strand, within CA264_16615 at 3862.335 kb on + strand, within CA264_16615 at 3862.336 kb on - strand, within CA264_16615 at 3862.381 kb on + strand, within CA264_16615 at 3862.404 kb on - strand, within CA264_16615 at 3862.450 kb on + strand, within CA264_16615 at 3862.451 kb on - strand, within CA264_16615 at 3862.458 kb on + strand, within CA264_16615 at 3862.458 kb on + strand, within CA264_16615 at 3862.459 kb on - strand, within CA264_16615 at 3862.459 kb on - strand, within CA264_16615 at 3862.459 kb on - strand, within CA264_16615 at 3862.529 kb on + strand, within CA264_16615 at 3862.535 kb on + strand, within CA264_16615 at 3862.535 kb on + strand, within CA264_16615 at 3862.536 kb on - strand, within CA264_16615 at 3862.595 kb on + strand, within CA264_16615 at 3862.596 kb on - strand, within CA264_16615 at 3862.596 kb on - strand, within CA264_16615 at 3862.596 kb on - strand, within CA264_16615 at 3862.649 kb on - strand, within CA264_16615 at 3862.770 kb on - strand, within CA264_16615 at 3862.816 kb on + strand, within CA264_16615 at 3862.852 kb on + strand, within CA264_16615 at 3862.899 kb on + strand, within CA264_16615 at 3862.899 kb on + strand, within CA264_16615 at 3862.900 kb on - strand, within CA264_16615 at 3862.900 kb on - strand, within CA264_16615 at 3862.901 kb on + strand, within CA264_16615 at 3863.020 kb on + strand, within CA264_16615 at 3863.025 kb on + strand, within CA264_16615 at 3863.041 kb on - strand, within CA264_16615 at 3863.042 kb on + strand, within CA264_16615 at 3863.043 kb on - strand, within CA264_16615 at 3863.043 kb on - strand, within CA264_16615 at 3863.043 kb on - strand, within CA264_16615 at 3863.097 kb on + strand, within CA264_16615 at 3863.098 kb on - strand, within CA264_16615 at 3863.109 kb on + strand, within CA264_16615 at 3863.150 kb on - strand, within CA264_16615 at 3863.167 kb on - strand, within CA264_16615 at 3863.230 kb on + strand, within CA264_16615 at 3863.231 kb on - strand, within CA264_16615 at 3863.240 kb on + strand, within CA264_16615 at 3863.240 kb on + strand, within CA264_16615 at 3863.265 kb on - strand, within CA264_16615 at 3863.265 kb on - strand, within CA264_16615 at 3863.265 kb on - strand, within CA264_16615 at 3863.370 kb on + strand, within CA264_16615 at 3863.460 kb on - strand at 3863.462 kb on - strand at 3863.462 kb on - strand at 3863.473 kb on + strand at 3863.474 kb on - strand at 3863.475 kb on + strand at 3863.487 kb on + strand at 3863.534 kb on - strand at 3863.541 kb on + strand at 3863.541 kb on + strand at 3863.541 kb on + strand at 3863.541 kb on + strand at 3863.542 kb on - strand at 3863.542 kb on - strand at 3863.542 kb on - strand at 3863.542 kb on - strand at 3863.561 kb on - strand at 3863.626 kb on - strand at 3863.649 kb on + strand at 3863.650 kb on - strand at 3863.650 kb on - strand at 3863.654 kb on - strand at 3863.654 kb on - strand at 3863.654 kb on - strand at 3863.702 kb on + strand at 3863.702 kb on + strand at 3863.702 kb on + strand at 3863.769 kb on + strand at 3863.825 kb on - strand, within CA264_16620 at 3863.825 kb on - strand, within CA264_16620 at 3863.825 kb on - strand, within CA264_16620 at 3863.930 kb on + strand, within CA264_16620 at 3863.930 kb on + strand, within CA264_16620 at 3863.931 kb on - strand, within CA264_16620 at 3863.932 kb on + strand, within CA264_16620 at 3863.932 kb on + strand, within CA264_16620 at 3863.933 kb on - strand, within CA264_16620 at 3863.933 kb on - strand, within CA264_16620 at 3863.933 kb on - strand, within CA264_16620 at 3863.933 kb on - strand, within CA264_16620 at 3864.002 kb on + strand, within CA264_16620 at 3864.003 kb on - strand, within CA264_16620 at 3864.003 kb on - strand, within CA264_16620 at 3864.026 kb on + strand, within CA264_16620 at 3864.046 kb on - strand, within CA264_16620 at 3864.071 kb on + strand, within CA264_16620 at 3864.095 kb on + strand, within CA264_16620 at 3864.096 kb on - strand, within CA264_16620 at 3864.198 kb on + strand, within CA264_16620 at 3864.199 kb on - strand, within CA264_16620 at 3864.199 kb on - strand, within CA264_16620 at 3864.209 kb on + strand, within CA264_16620 at 3864.210 kb on - strand, within CA264_16620 at 3864.227 kb on + strand, within CA264_16620 at 3864.230 kb on + strand, within CA264_16620 at 3864.230 kb on + strand, within CA264_16620 at 3864.231 kb on - strand, within CA264_16620 at 3864.232 kb on + strand, within CA264_16620 at 3864.233 kb on - strand, within CA264_16620 at 3864.233 kb on - strand, within CA264_16620 at 3864.249 kb on + strand, within CA264_16620 at 3864.250 kb on - strand, within CA264_16620 at 3864.261 kb on + strand, within CA264_16620 at 3864.265 kb on + strand, within CA264_16620 at 3864.265 kb on + strand, within CA264_16620 at 3864.266 kb on - strand, within CA264_16620 at 3864.300 kb on + strand, within CA264_16620 at 3864.332 kb on + strand, within CA264_16620 at 3864.350 kb on + strand, within CA264_16620 at 3864.359 kb on + strand, within CA264_16620 at 3864.437 kb on + strand, within CA264_16620 at 3864.455 kb on - strand, within CA264_16620 at 3864.458 kb on + strand, within CA264_16620 at 3864.459 kb on - strand, within CA264_16620 at 3864.459 kb on - strand, within CA264_16620 at 3864.486 kb on - strand, within CA264_16620 at 3864.500 kb on + strand, within CA264_16620 at 3864.562 kb on - strand, within CA264_16620
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 10 vol% remove 3,860,547 + CA264_16610 0.19 -0.4 3,860,548 - CA264_16610 0.19 -0.1 3,860,608 - CA264_16610 0.31 -0.5 3,860,684 - CA264_16610 0.47 -1.2 3,860,720 + CA264_16610 0.54 -0.4 3,860,765 + CA264_16610 0.63 +0.6 3,860,766 - CA264_16610 0.63 +0.8 3,860,773 + CA264_16610 0.64 +0.0 3,860,774 - CA264_16610 0.64 +0.7 3,860,858 + CA264_16610 0.81 +0.9 3,860,858 + CA264_16610 0.81 -0.1 3,860,859 - CA264_16610 0.81 -0.3 3,860,862 + CA264_16610 0.82 +0.8 3,860,863 - CA264_16610 0.82 -1.2 3,860,871 + CA264_16610 0.84 -0.6 3,860,897 - CA264_16610 0.89 +1.0 3,860,919 + +1.2 3,860,919 + -1.2 3,860,963 + -0.2 3,860,965 + -0.3 3,860,966 - +0.5 3,860,966 - +1.8 3,860,975 - -0.4 3,860,975 - +0.6 3,861,010 + -0.2 3,861,010 + +1.2 3,861,011 - -2.1 3,861,022 - -0.2 3,861,092 + -0.2 3,861,146 - -1.8 3,861,159 + +0.2 3,861,160 - +0.2 3,861,161 + +0.2 3,861,162 - -1.8 3,861,181 - +0.1 3,861,190 - -0.2 3,861,190 - -1.2 3,861,218 + -1.6 3,861,219 - -0.4 3,861,219 - -0.4 3,861,219 - +0.4 3,861,219 - -0.6 3,861,236 - -1.9 3,861,396 - -0.9 3,861,396 - -0.5 3,861,396 - +1.0 3,861,463 + -1.2 3,861,464 - -0.4 3,861,464 - -0.1 3,861,464 - -0.4 3,861,464 - -0.8 3,861,467 + -0.3 3,861,467 + -0.5 3,861,486 + -0.2 3,861,486 + +0.8 3,861,487 - -0.5 3,861,487 - -0.3 3,861,488 + -0.1 3,861,489 - +0.2 3,861,550 + -1.3 3,861,551 - -0.3 3,861,563 - -0.6 3,861,575 - +0.0 3,861,575 - +0.4 3,861,575 - -0.1 3,861,620 - +0.2 3,861,631 + -0.6 3,861,649 + +0.4 3,861,740 + CA264_16615 0.13 +0.1 3,861,741 - CA264_16615 0.13 -0.3 3,861,741 - CA264_16615 0.13 +0.6 3,861,741 - CA264_16615 0.13 +0.1 3,861,775 + CA264_16615 0.14 +1.4 3,861,814 + CA264_16615 0.16 -1.1 3,861,914 - CA264_16615 0.21 -0.2 3,861,917 + CA264_16615 0.21 +1.2 3,861,918 - CA264_16615 0.21 -0.4 3,861,938 - CA264_16615 0.22 +1.2 3,861,965 + CA264_16615 0.23 +0.4 3,861,965 + CA264_16615 0.23 -0.6 3,861,966 - CA264_16615 0.23 -0.4 3,861,993 + CA264_16615 0.24 -0.3 3,862,009 + CA264_16615 0.25 -0.4 3,862,010 - CA264_16615 0.25 +0.2 3,862,216 + CA264_16615 0.34 -0.9 3,862,218 + CA264_16615 0.34 -0.4 3,862,218 + CA264_16615 0.34 +0.2 3,862,335 + CA264_16615 0.40 -1.4 3,862,335 + CA264_16615 0.40 -0.4 3,862,335 + CA264_16615 0.40 +1.0 3,862,336 - CA264_16615 0.40 -0.3 3,862,381 + CA264_16615 0.42 -0.2 3,862,404 - CA264_16615 0.43 +2.2 3,862,450 + CA264_16615 0.45 -1.3 3,862,451 - CA264_16615 0.45 -0.6 3,862,458 + CA264_16615 0.45 +0.2 3,862,458 + CA264_16615 0.45 -0.9 3,862,459 - CA264_16615 0.45 -0.7 3,862,459 - CA264_16615 0.45 -1.1 3,862,459 - CA264_16615 0.45 -2.3 3,862,529 + CA264_16615 0.49 -0.9 3,862,535 + CA264_16615 0.49 +0.4 3,862,535 + CA264_16615 0.49 -0.7 3,862,536 - CA264_16615 0.49 +0.4 3,862,595 + CA264_16615 0.52 -0.4 3,862,596 - CA264_16615 0.52 +0.4 3,862,596 - CA264_16615 0.52 +0.2 3,862,596 - CA264_16615 0.52 -0.0 3,862,649 - CA264_16615 0.54 -0.2 3,862,770 - CA264_16615 0.60 -0.0 3,862,816 + CA264_16615 0.62 -0.3 3,862,852 + CA264_16615 0.63 -0.9 3,862,899 + CA264_16615 0.66 -0.6 3,862,899 + CA264_16615 0.66 +0.0 3,862,900 - CA264_16615 0.66 -0.5 3,862,900 - CA264_16615 0.66 -0.8 3,862,901 + CA264_16615 0.66 +0.3 3,863,020 + CA264_16615 0.71 +0.8 3,863,025 + CA264_16615 0.71 -0.5 3,863,041 - CA264_16615 0.72 -0.4 3,863,042 + CA264_16615 0.72 -0.9 3,863,043 - CA264_16615 0.72 -0.5 3,863,043 - CA264_16615 0.72 -1.4 3,863,043 - CA264_16615 0.72 -0.9 3,863,097 + CA264_16615 0.75 -0.4 3,863,098 - CA264_16615 0.75 -1.3 3,863,109 + CA264_16615 0.75 -0.5 3,863,150 - CA264_16615 0.77 +0.0 3,863,167 - CA264_16615 0.78 +2.8 3,863,230 + CA264_16615 0.81 -0.4 3,863,231 - CA264_16615 0.81 +0.9 3,863,240 + CA264_16615 0.81 +2.8 3,863,240 + CA264_16615 0.81 +2.2 3,863,265 - CA264_16615 0.82 +1.2 3,863,265 - CA264_16615 0.82 -0.3 3,863,265 - CA264_16615 0.82 -0.0 3,863,370 + CA264_16615 0.87 -0.1 3,863,460 - -0.1 3,863,462 - -0.2 3,863,462 - +0.2 3,863,473 + -0.8 3,863,474 - -0.1 3,863,475 + -0.3 3,863,487 + +0.8 3,863,534 - -0.6 3,863,541 + -0.1 3,863,541 + -0.4 3,863,541 + -0.9 3,863,541 + -0.0 3,863,542 - -0.6 3,863,542 - +0.9 3,863,542 - -1.1 3,863,542 - -0.3 3,863,561 - -1.6 3,863,626 - -0.2 3,863,649 + +2.0 3,863,650 - -0.8 3,863,650 - +0.1 3,863,654 - -1.2 3,863,654 - -2.1 3,863,654 - -0.8 3,863,702 + +0.2 3,863,702 + -0.6 3,863,702 + -1.1 3,863,769 + -0.2 3,863,825 - CA264_16620 0.11 +0.6 3,863,825 - CA264_16620 0.11 +3.2 3,863,825 - CA264_16620 0.11 +0.6 3,863,930 + CA264_16620 0.18 -0.0 3,863,930 + CA264_16620 0.18 -0.4 3,863,931 - CA264_16620 0.18 -1.1 3,863,932 + CA264_16620 0.18 +1.2 3,863,932 + CA264_16620 0.18 +0.2 3,863,933 - CA264_16620 0.18 -0.2 3,863,933 - CA264_16620 0.18 -0.3 3,863,933 - CA264_16620 0.18 +1.5 3,863,933 - CA264_16620 0.18 -0.1 3,864,002 + CA264_16620 0.23 -1.3 3,864,003 - CA264_16620 0.23 +0.0 3,864,003 - CA264_16620 0.23 -0.2 3,864,026 + CA264_16620 0.24 +0.5 3,864,046 - CA264_16620 0.26 -0.6 3,864,071 + CA264_16620 0.27 -1.1 3,864,095 + CA264_16620 0.29 -0.3 3,864,096 - CA264_16620 0.29 -0.5 3,864,198 + CA264_16620 0.36 -1.8 3,864,199 - CA264_16620 0.36 -0.6 3,864,199 - CA264_16620 0.36 -0.2 3,864,209 + CA264_16620 0.36 -0.0 3,864,210 - CA264_16620 0.36 +0.8 3,864,227 + CA264_16620 0.37 -0.0 3,864,230 + CA264_16620 0.38 -0.2 3,864,230 + CA264_16620 0.38 +0.5 3,864,231 - CA264_16620 0.38 +1.2 3,864,232 + CA264_16620 0.38 +0.6 3,864,233 - CA264_16620 0.38 -0.3 3,864,233 - CA264_16620 0.38 -2.0 3,864,249 + CA264_16620 0.39 -0.8 3,864,250 - CA264_16620 0.39 -0.4 3,864,261 + CA264_16620 0.40 -0.1 3,864,265 + CA264_16620 0.40 +1.2 3,864,265 + CA264_16620 0.40 +0.2 3,864,266 - CA264_16620 0.40 +0.6 3,864,300 + CA264_16620 0.42 -0.6 3,864,332 + CA264_16620 0.44 +0.2 3,864,350 + CA264_16620 0.45 +1.2 3,864,359 + CA264_16620 0.46 +1.2 3,864,437 + CA264_16620 0.51 -1.4 3,864,455 - CA264_16620 0.52 -1.7 3,864,458 + CA264_16620 0.52 +0.7 3,864,459 - CA264_16620 0.53 +0.1 3,864,459 - CA264_16620 0.53 -0.8 3,864,486 - CA264_16620 0.54 -2.6 3,864,500 + CA264_16620 0.55 +0.4 3,864,562 - CA264_16620 0.59 -0.5
Or see this region's nucleotide sequence