Experiment: m.b. Dimethyl Sulfoxide 10 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_16325 and CA264_16330 are separated by 43 nucleotides CA264_16330 and CA264_16335 are separated by 5 nucleotides CA264_16335 and CA264_16340 are separated by 307 nucleotides
CA264_16325: CA264_16325 - ATP synthase F0 subunit A, at 3,797,445 to 3,798,461
_16325
CA264_16330: CA264_16330 - hypothetical protein, at 3,798,505 to 3,798,888
_16330
CA264_16335: CA264_16335 - hypothetical protein, at 3,798,894 to 3,799,139
_16335
CA264_16340: CA264_16340 - hypothetical protein, at 3,799,447 to 3,802,284
_16340
Position (kb)
3798
3799 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3798.506 kb on + strand at 3798.507 kb on - strand at 3798.579 kb on - strand, within CA264_16330 at 3798.690 kb on - strand, within CA264_16330 at 3798.693 kb on - strand, within CA264_16330 at 3798.740 kb on + strand, within CA264_16330 at 3798.740 kb on + strand, within CA264_16330 at 3798.740 kb on + strand, within CA264_16330 at 3798.740 kb on + strand, within CA264_16330 at 3798.810 kb on - strand, within CA264_16330 at 3798.810 kb on - strand, within CA264_16330 at 3798.816 kb on + strand, within CA264_16330 at 3798.841 kb on + strand, within CA264_16330 at 3798.842 kb on - strand, within CA264_16330 at 3798.842 kb on - strand, within CA264_16330 at 3798.850 kb on + strand at 3798.912 kb on + strand at 3798.912 kb on + strand at 3798.912 kb on + strand at 3798.912 kb on + strand at 3798.913 kb on - strand at 3798.913 kb on - strand at 3798.913 kb on - strand at 3798.914 kb on + strand at 3798.915 kb on - strand at 3798.987 kb on + strand, within CA264_16335 at 3798.991 kb on + strand, within CA264_16335 at 3798.991 kb on + strand, within CA264_16335 at 3799.081 kb on - strand, within CA264_16335 at 3799.083 kb on - strand, within CA264_16335 at 3799.213 kb on - strand at 3799.245 kb on + strand at 3799.245 kb on + strand at 3799.272 kb on + strand at 3799.309 kb on - strand at 3799.335 kb on - strand at 3799.335 kb on - strand at 3799.335 kb on - strand at 3799.340 kb on + strand at 3799.340 kb on + strand at 3799.341 kb on - strand at 3799.341 kb on - strand at 3799.341 kb on - strand at 3799.373 kb on + strand at 3799.373 kb on + strand at 3799.382 kb on - strand at 3799.400 kb on + strand at 3799.400 kb on + strand at 3799.402 kb on + strand at 3799.402 kb on + strand at 3799.402 kb on + strand at 3799.407 kb on + strand at 3799.407 kb on + strand at 3799.407 kb on + strand at 3799.408 kb on - strand at 3799.408 kb on - strand at 3799.409 kb on + strand at 3799.409 kb on + strand at 3799.409 kb on + strand at 3799.409 kb on + strand at 3799.410 kb on - strand at 3799.410 kb on - strand at 3799.411 kb on + strand at 3799.411 kb on + strand at 3799.411 kb on + strand at 3799.412 kb on - strand at 3799.412 kb on - strand at 3799.412 kb on - strand at 3799.412 kb on - strand at 3799.412 kb on - strand at 3799.412 kb on - strand at 3799.412 kb on - strand at 3799.416 kb on - strand at 3799.416 kb on - strand at 3799.452 kb on + strand at 3799.452 kb on + strand at 3799.477 kb on - strand at 3799.478 kb on + strand at 3799.541 kb on - strand at 3799.561 kb on + strand at 3799.561 kb on + strand at 3799.563 kb on + strand at 3799.630 kb on + strand at 3799.630 kb on + strand at 3799.631 kb on - strand at 3799.631 kb on - strand at 3799.631 kb on - strand at 3799.657 kb on + strand at 3799.657 kb on + strand at 3799.658 kb on - strand at 3799.741 kb on + strand, within CA264_16340 at 3799.774 kb on + strand, within CA264_16340 at 3799.774 kb on + strand, within CA264_16340 at 3799.774 kb on + strand, within CA264_16340 at 3799.775 kb on - strand, within CA264_16340 at 3799.775 kb on - strand, within CA264_16340 at 3799.775 kb on - strand, within CA264_16340 at 3799.775 kb on - strand, within CA264_16340 at 3799.777 kb on - strand, within CA264_16340 at 3799.798 kb on + strand, within CA264_16340 at 3799.840 kb on + strand, within CA264_16340 at 3799.840 kb on + strand, within CA264_16340 at 3799.844 kb on + strand, within CA264_16340
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 10 vol% remove 3,798,506 + +0.9 3,798,507 - -0.3 3,798,579 - CA264_16330 0.19 +2.2 3,798,690 - CA264_16330 0.48 +0.4 3,798,693 - CA264_16330 0.49 -1.0 3,798,740 + CA264_16330 0.61 -0.2 3,798,740 + CA264_16330 0.61 -1.4 3,798,740 + CA264_16330 0.61 -0.3 3,798,740 + CA264_16330 0.61 +0.2 3,798,810 - CA264_16330 0.79 +0.5 3,798,810 - CA264_16330 0.79 +0.1 3,798,816 + CA264_16330 0.81 +0.6 3,798,841 + CA264_16330 0.88 -0.2 3,798,842 - CA264_16330 0.88 -0.2 3,798,842 - CA264_16330 0.88 -0.2 3,798,850 + +1.2 3,798,912 + +0.4 3,798,912 + -0.2 3,798,912 + -0.5 3,798,912 + -0.7 3,798,913 - -0.2 3,798,913 - -0.2 3,798,913 - +1.2 3,798,914 + -0.2 3,798,915 - +0.7 3,798,987 + CA264_16335 0.38 +0.2 3,798,991 + CA264_16335 0.39 +1.6 3,798,991 + CA264_16335 0.39 -1.4 3,799,081 - CA264_16335 0.76 -0.8 3,799,083 - CA264_16335 0.77 +0.2 3,799,213 - +1.2 3,799,245 + -0.6 3,799,245 + +1.8 3,799,272 + +0.6 3,799,309 - -1.7 3,799,335 - +0.7 3,799,335 - -1.8 3,799,335 - -1.4 3,799,340 + +2.2 3,799,340 + -0.4 3,799,341 - +0.4 3,799,341 - -0.4 3,799,341 - -1.4 3,799,373 + -0.2 3,799,373 + -0.0 3,799,382 - +1.5 3,799,400 + -0.3 3,799,400 + -0.0 3,799,402 + +0.0 3,799,402 + -0.1 3,799,402 + +1.2 3,799,407 + +0.6 3,799,407 + +0.2 3,799,407 + +0.4 3,799,408 - -0.8 3,799,408 - -0.5 3,799,409 + -1.4 3,799,409 + +0.2 3,799,409 + +1.0 3,799,409 + -0.6 3,799,410 - -0.2 3,799,410 - -0.2 3,799,411 + -0.6 3,799,411 + -0.9 3,799,411 + -0.2 3,799,412 - -0.0 3,799,412 - -0.7 3,799,412 - +0.2 3,799,412 - -0.2 3,799,412 - +0.0 3,799,412 - -0.8 3,799,412 - -0.3 3,799,416 - -0.8 3,799,416 - +0.2 3,799,452 + -1.7 3,799,452 + -0.0 3,799,477 - -0.5 3,799,478 + +0.0 3,799,541 - -0.1 3,799,561 + +0.2 3,799,561 + +0.1 3,799,563 + +0.3 3,799,630 + -0.3 3,799,630 + -0.8 3,799,631 - +0.2 3,799,631 - -0.8 3,799,631 - +0.8 3,799,657 + -0.4 3,799,657 + +0.9 3,799,658 - -1.2 3,799,741 + CA264_16340 0.10 +1.8 3,799,774 + CA264_16340 0.12 -2.3 3,799,774 + CA264_16340 0.12 +0.4 3,799,774 + CA264_16340 0.12 +0.1 3,799,775 - CA264_16340 0.12 +2.0 3,799,775 - CA264_16340 0.12 +0.2 3,799,775 - CA264_16340 0.12 -0.4 3,799,775 - CA264_16340 0.12 -0.6 3,799,777 - CA264_16340 0.12 +0.1 3,799,798 + CA264_16340 0.12 +0.2 3,799,840 + CA264_16340 0.14 +0.0 3,799,840 + CA264_16340 0.14 -0.3 3,799,844 + CA264_16340 0.14 -0.3
Or see this region's nucleotide sequence