Experiment: m.b. Dimethyl Sulfoxide 10 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_15560 and CA264_15565 are separated by 48 nucleotides CA264_15565 and CA264_15570 are separated by 85 nucleotides CA264_15570 and CA264_15575 are separated by 292 nucleotides CA264_15575 and CA264_15580 are separated by 110 nucleotides
CA264_15560: CA264_15560 - CPBP family intramembrane metalloprotease, at 3,641,119 to 3,641,853
_15560
CA264_15565: CA264_15565 - RDD family protein, at 3,641,902 to 3,642,345
_15565
CA264_15570: CA264_15570 - hypothetical protein, at 3,642,431 to 3,643,879
_15570
CA264_15575: CA264_15575 - hypothetical protein, at 3,644,172 to 3,644,435
_15575
CA264_15580: CA264_15580 - phospholipase, at 3,644,546 to 3,645,169
_15580
Position (kb)
3642
3643
3644 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3641.431 kb on + strand, within CA264_15560 at 3641.432 kb on - strand, within CA264_15560 at 3641.485 kb on + strand, within CA264_15560 at 3641.485 kb on + strand, within CA264_15560 at 3641.485 kb on + strand, within CA264_15560 at 3641.486 kb on - strand, within CA264_15560 at 3641.737 kb on - strand, within CA264_15560 at 3641.763 kb on - strand, within CA264_15560 at 3641.815 kb on + strand at 3641.815 kb on + strand at 3641.816 kb on - strand at 3641.816 kb on - strand at 3641.816 kb on - strand at 3641.817 kb on + strand at 3641.818 kb on - strand at 3641.882 kb on + strand at 3641.882 kb on + strand at 3641.882 kb on + strand at 3641.882 kb on + strand at 3641.882 kb on + strand at 3641.883 kb on - strand at 3641.883 kb on - strand at 3641.892 kb on + strand at 3641.892 kb on + strand at 3641.892 kb on + strand at 3641.893 kb on - strand at 3641.893 kb on - strand at 3641.896 kb on + strand at 3641.896 kb on + strand at 3641.897 kb on - strand at 3641.898 kb on + strand at 3641.899 kb on - strand at 3641.946 kb on + strand at 3641.946 kb on + strand at 3641.947 kb on - strand, within CA264_15565 at 3641.996 kb on + strand, within CA264_15565 at 3641.996 kb on + strand, within CA264_15565 at 3641.997 kb on - strand, within CA264_15565 at 3641.997 kb on - strand, within CA264_15565 at 3642.053 kb on + strand, within CA264_15565 at 3642.054 kb on - strand, within CA264_15565 at 3642.125 kb on - strand, within CA264_15565 at 3642.127 kb on + strand, within CA264_15565 at 3642.127 kb on + strand, within CA264_15565 at 3642.127 kb on + strand, within CA264_15565 at 3642.127 kb on + strand, within CA264_15565 at 3642.128 kb on - strand, within CA264_15565 at 3642.128 kb on - strand, within CA264_15565 at 3642.128 kb on - strand, within CA264_15565 at 3642.128 kb on - strand, within CA264_15565 at 3642.128 kb on - strand, within CA264_15565 at 3642.128 kb on - strand, within CA264_15565 at 3642.207 kb on + strand, within CA264_15565 at 3642.274 kb on + strand, within CA264_15565 at 3642.274 kb on + strand, within CA264_15565 at 3642.275 kb on - strand, within CA264_15565 at 3642.275 kb on - strand, within CA264_15565 at 3642.275 kb on - strand, within CA264_15565 at 3642.282 kb on + strand, within CA264_15565 at 3642.282 kb on + strand, within CA264_15565 at 3642.326 kb on + strand at 3642.327 kb on - strand at 3642.327 kb on - strand at 3642.397 kb on + strand at 3642.398 kb on - strand at 3642.398 kb on - strand at 3642.431 kb on - strand at 3642.431 kb on - strand at 3642.431 kb on - strand at 3642.475 kb on - strand at 3642.572 kb on - strand at 3642.572 kb on - strand at 3642.599 kb on + strand, within CA264_15570 at 3642.599 kb on + strand, within CA264_15570 at 3642.807 kb on - strand, within CA264_15570 at 3642.839 kb on + strand, within CA264_15570 at 3642.840 kb on - strand, within CA264_15570 at 3642.849 kb on - strand, within CA264_15570 at 3642.856 kb on - strand, within CA264_15570 at 3642.856 kb on - strand, within CA264_15570 at 3642.862 kb on + strand, within CA264_15570 at 3642.900 kb on - strand, within CA264_15570 at 3643.168 kb on - strand, within CA264_15570 at 3643.184 kb on + strand, within CA264_15570 at 3643.185 kb on - strand, within CA264_15570 at 3643.206 kb on - strand, within CA264_15570 at 3643.285 kb on - strand, within CA264_15570 at 3643.322 kb on + strand, within CA264_15570 at 3643.322 kb on + strand, within CA264_15570 at 3643.323 kb on - strand, within CA264_15570 at 3643.323 kb on - strand, within CA264_15570 at 3643.341 kb on - strand, within CA264_15570 at 3643.341 kb on - strand, within CA264_15570 at 3643.343 kb on - strand, within CA264_15570 at 3643.471 kb on + strand, within CA264_15570 at 3643.514 kb on + strand, within CA264_15570 at 3643.514 kb on + strand, within CA264_15570 at 3643.515 kb on - strand, within CA264_15570 at 3643.526 kb on + strand, within CA264_15570 at 3643.527 kb on - strand, within CA264_15570 at 3643.527 kb on - strand, within CA264_15570 at 3643.647 kb on - strand, within CA264_15570 at 3643.701 kb on + strand, within CA264_15570 at 3643.701 kb on + strand, within CA264_15570 at 3643.702 kb on - strand, within CA264_15570 at 3643.791 kb on + strand at 3643.792 kb on - strand at 3643.792 kb on - strand at 3643.793 kb on + strand at 3643.793 kb on + strand at 3643.797 kb on + strand at 3643.797 kb on + strand at 3643.797 kb on + strand at 3643.838 kb on - strand at 3643.974 kb on + strand at 3643.975 kb on - strand at 3644.082 kb on + strand at 3644.093 kb on - strand at 3644.124 kb on + strand at 3644.124 kb on + strand at 3644.125 kb on - strand at 3644.142 kb on + strand at 3644.142 kb on + strand at 3644.143 kb on - strand at 3644.144 kb on + strand at 3644.144 kb on + strand at 3644.144 kb on + strand at 3644.144 kb on + strand at 3644.144 kb on + strand at 3644.144 kb on + strand at 3644.145 kb on - strand at 3644.145 kb on - strand at 3644.145 kb on - strand at 3644.145 kb on - strand at 3644.145 kb on - strand at 3644.149 kb on + strand at 3644.149 kb on + strand at 3644.149 kb on + strand at 3644.150 kb on - strand at 3644.150 kb on - strand at 3644.150 kb on - strand at 3644.163 kb on + strand at 3644.164 kb on - strand at 3644.164 kb on - strand at 3644.167 kb on + strand at 3644.167 kb on + strand at 3644.167 kb on + strand at 3644.168 kb on - strand at 3644.168 kb on - strand at 3644.168 kb on - strand at 3644.171 kb on + strand at 3644.171 kb on + strand at 3644.172 kb on - strand at 3644.172 kb on - strand at 3644.188 kb on + strand at 3644.201 kb on - strand, within CA264_15575 at 3644.236 kb on + strand, within CA264_15575 at 3644.283 kb on + strand, within CA264_15575 at 3644.300 kb on - strand, within CA264_15575 at 3644.306 kb on + strand, within CA264_15575 at 3644.306 kb on + strand, within CA264_15575 at 3644.322 kb on - strand, within CA264_15575 at 3644.322 kb on - strand, within CA264_15575 at 3644.332 kb on + strand, within CA264_15575 at 3644.444 kb on + strand at 3644.502 kb on + strand at 3644.555 kb on + strand at 3644.571 kb on - strand at 3644.571 kb on - strand at 3644.687 kb on - strand, within CA264_15580 at 3644.687 kb on - strand, within CA264_15580 at 3644.687 kb on - strand, within CA264_15580 at 3644.691 kb on - strand, within CA264_15580 at 3644.691 kb on - strand, within CA264_15580 at 3644.805 kb on + strand, within CA264_15580 at 3644.842 kb on - strand, within CA264_15580
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 10 vol% remove 3,641,431 + CA264_15560 0.42 -0.3 3,641,432 - CA264_15560 0.43 +0.6 3,641,485 + CA264_15560 0.50 -1.2 3,641,485 + CA264_15560 0.50 -0.5 3,641,485 + CA264_15560 0.50 +1.2 3,641,486 - CA264_15560 0.50 -1.0 3,641,737 - CA264_15560 0.84 -0.4 3,641,763 - CA264_15560 0.88 +2.2 3,641,815 + -0.6 3,641,815 + +0.0 3,641,816 - -0.1 3,641,816 - -0.0 3,641,816 - -0.7 3,641,817 + -0.9 3,641,818 - +0.5 3,641,882 + -0.9 3,641,882 + -0.4 3,641,882 + +1.3 3,641,882 + +0.7 3,641,882 + +1.1 3,641,883 - -0.3 3,641,883 - +0.1 3,641,892 + -0.2 3,641,892 + -0.3 3,641,892 + +0.7 3,641,893 - +0.2 3,641,893 - -0.3 3,641,896 + +1.1 3,641,896 + +0.4 3,641,897 - -1.4 3,641,898 + +1.6 3,641,899 - +0.4 3,641,946 + -0.4 3,641,946 + +1.8 3,641,947 - CA264_15565 0.10 +0.2 3,641,996 + CA264_15565 0.21 +0.4 3,641,996 + CA264_15565 0.21 -0.2 3,641,997 - CA264_15565 0.21 -0.0 3,641,997 - CA264_15565 0.21 -0.3 3,642,053 + CA264_15565 0.34 -0.0 3,642,054 - CA264_15565 0.34 +0.3 3,642,125 - CA264_15565 0.50 +0.2 3,642,127 + CA264_15565 0.51 +0.7 3,642,127 + CA264_15565 0.51 +1.1 3,642,127 + CA264_15565 0.51 +1.1 3,642,127 + CA264_15565 0.51 -2.2 3,642,128 - CA264_15565 0.51 -0.2 3,642,128 - CA264_15565 0.51 -0.5 3,642,128 - CA264_15565 0.51 -1.2 3,642,128 - CA264_15565 0.51 -0.4 3,642,128 - CA264_15565 0.51 -0.4 3,642,128 - CA264_15565 0.51 +0.9 3,642,207 + CA264_15565 0.69 -0.5 3,642,274 + CA264_15565 0.84 -2.0 3,642,274 + CA264_15565 0.84 +1.1 3,642,275 - CA264_15565 0.84 +0.1 3,642,275 - CA264_15565 0.84 +0.1 3,642,275 - CA264_15565 0.84 -0.5 3,642,282 + CA264_15565 0.86 +1.8 3,642,282 + CA264_15565 0.86 -0.4 3,642,326 + -0.1 3,642,327 - -0.2 3,642,327 - -0.9 3,642,397 + -0.4 3,642,398 - +0.3 3,642,398 - +0.0 3,642,431 - -0.9 3,642,431 - +0.4 3,642,431 - -1.0 3,642,475 - -0.3 3,642,572 - -0.2 3,642,572 - +0.1 3,642,599 + CA264_15570 0.12 -0.4 3,642,599 + CA264_15570 0.12 +0.4 3,642,807 - CA264_15570 0.26 -0.8 3,642,839 + CA264_15570 0.28 +0.2 3,642,840 - CA264_15570 0.28 +1.2 3,642,849 - CA264_15570 0.29 -0.6 3,642,856 - CA264_15570 0.29 +0.2 3,642,856 - CA264_15570 0.29 +0.3 3,642,862 + CA264_15570 0.30 -0.3 3,642,900 - CA264_15570 0.32 -1.4 3,643,168 - CA264_15570 0.51 -0.6 3,643,184 + CA264_15570 0.52 +0.3 3,643,185 - CA264_15570 0.52 -0.6 3,643,206 - CA264_15570 0.53 -1.4 3,643,285 - CA264_15570 0.59 -0.2 3,643,322 + CA264_15570 0.61 -0.6 3,643,322 + CA264_15570 0.61 -0.4 3,643,323 - CA264_15570 0.62 -1.4 3,643,323 - CA264_15570 0.62 +0.5 3,643,341 - CA264_15570 0.63 -0.4 3,643,341 - CA264_15570 0.63 +0.6 3,643,343 - CA264_15570 0.63 -0.4 3,643,471 + CA264_15570 0.72 -1.4 3,643,514 + CA264_15570 0.75 +0.4 3,643,514 + CA264_15570 0.75 +0.7 3,643,515 - CA264_15570 0.75 +0.2 3,643,526 + CA264_15570 0.76 -0.4 3,643,527 - CA264_15570 0.76 +0.4 3,643,527 - CA264_15570 0.76 -2.8 3,643,647 - CA264_15570 0.84 +0.7 3,643,701 + CA264_15570 0.88 +0.3 3,643,701 + CA264_15570 0.88 -0.4 3,643,702 - CA264_15570 0.88 -1.2 3,643,791 + -0.8 3,643,792 - +1.2 3,643,792 - -0.4 3,643,793 + +0.2 3,643,793 + +2.2 3,643,797 + -0.0 3,643,797 + -0.5 3,643,797 + +0.6 3,643,838 - -0.2 3,643,974 + -0.2 3,643,975 - -0.5 3,644,082 + -0.0 3,644,093 - -0.3 3,644,124 + -0.7 3,644,124 + -0.4 3,644,125 - -0.6 3,644,142 + -0.3 3,644,142 + -0.3 3,644,143 - -0.0 3,644,144 + +0.3 3,644,144 + -1.1 3,644,144 + -0.6 3,644,144 + -1.0 3,644,144 + -0.8 3,644,144 + +1.2 3,644,145 - -0.6 3,644,145 - -1.0 3,644,145 - +0.7 3,644,145 - -0.1 3,644,145 - +0.4 3,644,149 + +0.0 3,644,149 + +0.2 3,644,149 + +1.0 3,644,150 - -2.2 3,644,150 - -0.1 3,644,150 - +0.0 3,644,163 + -0.2 3,644,164 - +0.4 3,644,164 - -0.3 3,644,167 + +0.2 3,644,167 + +0.2 3,644,167 + -0.4 3,644,168 - -2.3 3,644,168 - -0.8 3,644,168 - -1.0 3,644,171 + +0.6 3,644,171 + -0.4 3,644,172 - -0.7 3,644,172 - -0.0 3,644,188 + +1.7 3,644,201 - CA264_15575 0.11 +0.4 3,644,236 + CA264_15575 0.24 -0.8 3,644,283 + CA264_15575 0.42 +0.8 3,644,300 - CA264_15575 0.48 -0.0 3,644,306 + CA264_15575 0.51 -1.7 3,644,306 + CA264_15575 0.51 -0.7 3,644,322 - CA264_15575 0.57 -0.7 3,644,322 - CA264_15575 0.57 +0.2 3,644,332 + CA264_15575 0.61 -0.8 3,644,444 + -0.5 3,644,502 + -0.1 3,644,555 + +0.4 3,644,571 - -0.2 3,644,571 - -1.1 3,644,687 - CA264_15580 0.23 -0.2 3,644,687 - CA264_15580 0.23 -0.7 3,644,687 - CA264_15580 0.23 -0.2 3,644,691 - CA264_15580 0.23 -1.4 3,644,691 - CA264_15580 0.23 -1.0 3,644,805 + CA264_15580 0.42 -0.8 3,644,842 - CA264_15580 0.47 +0.7
Or see this region's nucleotide sequence