Experiment: m.b. Dimethyl Sulfoxide 10 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_13410 and CA264_13415 are separated by 596 nucleotides CA264_13415 and CA264_13420 are separated by 98 nucleotides CA264_13420 and CA264_13425 are separated by 89 nucleotides
CA264_13410: CA264_13410 - UDP-glucose 6-dehydrogenase, at 3,127,375 to 3,128,733
_13410
CA264_13415: CA264_13415 - alpha/beta hydrolase, at 3,129,330 to 3,130,223
_13415
CA264_13420: CA264_13420 - hypothetical protein, at 3,130,322 to 3,130,507
_13420
CA264_13425: CA264_13425 - FAD-binding oxidoreductase, at 3,130,597 to 3,132,000
_13425
Position (kb)
3129
3130
3131 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3128.752 kb on - strand at 3128.752 kb on - strand at 3128.752 kb on - strand at 3128.757 kb on + strand at 3128.757 kb on + strand at 3128.758 kb on - strand at 3128.758 kb on - strand at 3128.759 kb on + strand at 3128.762 kb on + strand at 3128.763 kb on - strand at 3128.832 kb on - strand at 3128.846 kb on - strand at 3128.851 kb on - strand at 3128.851 kb on - strand at 3128.873 kb on + strand at 3128.874 kb on - strand at 3128.878 kb on - strand at 3128.889 kb on + strand at 3128.889 kb on - strand at 3128.982 kb on - strand at 3128.982 kb on - strand at 3129.052 kb on - strand at 3129.101 kb on - strand at 3129.101 kb on - strand at 3129.120 kb on + strand at 3129.123 kb on + strand at 3129.141 kb on - strand at 3129.194 kb on - strand at 3129.199 kb on - strand at 3129.269 kb on + strand at 3129.270 kb on - strand at 3129.300 kb on - strand at 3129.302 kb on - strand at 3129.307 kb on - strand at 3129.329 kb on + strand at 3129.361 kb on - strand at 3129.374 kb on + strand at 3129.375 kb on - strand at 3129.379 kb on - strand at 3129.408 kb on + strand at 3129.409 kb on - strand at 3129.410 kb on + strand at 3129.412 kb on + strand at 3129.412 kb on + strand at 3129.412 kb on + strand at 3129.412 kb on + strand at 3129.413 kb on - strand at 3129.413 kb on - strand at 3129.489 kb on - strand, within CA264_13415 at 3129.571 kb on - strand, within CA264_13415 at 3129.626 kb on - strand, within CA264_13415 at 3129.646 kb on + strand, within CA264_13415 at 3129.647 kb on - strand, within CA264_13415 at 3129.679 kb on - strand, within CA264_13415 at 3129.894 kb on + strand, within CA264_13415 at 3129.897 kb on - strand, within CA264_13415 at 3130.026 kb on - strand, within CA264_13415 at 3130.026 kb on - strand, within CA264_13415 at 3130.101 kb on + strand, within CA264_13415 at 3130.101 kb on + strand, within CA264_13415 at 3130.101 kb on + strand, within CA264_13415 at 3130.101 kb on + strand, within CA264_13415 at 3130.102 kb on - strand, within CA264_13415 at 3130.102 kb on - strand, within CA264_13415 at 3130.168 kb on - strand at 3130.214 kb on - strand at 3130.221 kb on + strand at 3130.265 kb on + strand at 3130.266 kb on - strand at 3130.299 kb on + strand at 3130.299 kb on + strand at 3130.302 kb on - strand at 3130.390 kb on + strand, within CA264_13420 at 3130.391 kb on - strand, within CA264_13420 at 3130.454 kb on + strand, within CA264_13420 at 3130.504 kb on - strand at 3130.510 kb on + strand at 3130.510 kb on + strand at 3130.511 kb on - strand at 3130.513 kb on - strand at 3130.524 kb on + strand at 3130.575 kb on + strand at 3130.595 kb on + strand at 3130.622 kb on - strand at 3130.695 kb on + strand at 3130.697 kb on + strand at 3130.697 kb on + strand at 3130.698 kb on - strand at 3130.698 kb on - strand at 3130.829 kb on - strand, within CA264_13425 at 3130.888 kb on - strand, within CA264_13425 at 3130.890 kb on - strand, within CA264_13425 at 3130.890 kb on - strand, within CA264_13425 at 3130.967 kb on + strand, within CA264_13425 at 3130.967 kb on + strand, within CA264_13425 at 3130.971 kb on + strand, within CA264_13425 at 3130.997 kb on - strand, within CA264_13425 at 3131.012 kb on - strand, within CA264_13425 at 3131.088 kb on - strand, within CA264_13425 at 3131.088 kb on - strand, within CA264_13425 at 3131.158 kb on + strand, within CA264_13425 at 3131.159 kb on - strand, within CA264_13425 at 3131.159 kb on - strand, within CA264_13425
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 10 vol% remove 3,128,752 - +0.0 3,128,752 - -0.6 3,128,752 - -1.0 3,128,757 + -0.4 3,128,757 + +2.0 3,128,758 - +0.3 3,128,758 - -0.4 3,128,759 + +0.1 3,128,762 + +1.8 3,128,763 - -1.3 3,128,832 - -1.6 3,128,846 - -1.0 3,128,851 - +0.8 3,128,851 - -0.2 3,128,873 + -0.4 3,128,874 - +0.6 3,128,878 - -0.2 3,128,889 + -2.7 3,128,889 - -0.4 3,128,982 - +0.1 3,128,982 - +0.5 3,129,052 - +2.6 3,129,101 - +0.8 3,129,101 - -0.3 3,129,120 + +0.6 3,129,123 + -0.5 3,129,141 - +0.3 3,129,194 - -0.4 3,129,199 - -0.1 3,129,269 + -0.3 3,129,270 - +0.7 3,129,300 - +0.2 3,129,302 - -0.5 3,129,307 - -0.3 3,129,329 + +0.5 3,129,361 - -0.1 3,129,374 + -1.1 3,129,375 - -0.5 3,129,379 - -1.1 3,129,408 + +0.3 3,129,409 - -0.5 3,129,410 + -1.1 3,129,412 + +0.3 3,129,412 + +0.3 3,129,412 + -0.9 3,129,412 + +0.0 3,129,413 - -0.3 3,129,413 - -0.8 3,129,489 - CA264_13415 0.18 +0.3 3,129,571 - CA264_13415 0.27 +1.6 3,129,626 - CA264_13415 0.33 -0.2 3,129,646 + CA264_13415 0.35 -0.0 3,129,647 - CA264_13415 0.35 +2.0 3,129,679 - CA264_13415 0.39 -1.1 3,129,894 + CA264_13415 0.63 -0.7 3,129,897 - CA264_13415 0.63 -0.4 3,130,026 - CA264_13415 0.78 -0.1 3,130,026 - CA264_13415 0.78 +0.0 3,130,101 + CA264_13415 0.86 -1.4 3,130,101 + CA264_13415 0.86 +0.4 3,130,101 + CA264_13415 0.86 +0.4 3,130,101 + CA264_13415 0.86 -1.1 3,130,102 - CA264_13415 0.86 -0.9 3,130,102 - CA264_13415 0.86 +0.2 3,130,168 - +0.0 3,130,214 - +0.4 3,130,221 + -0.1 3,130,265 + +0.6 3,130,266 - +1.6 3,130,299 + -0.4 3,130,299 + +1.0 3,130,302 - -0.7 3,130,390 + CA264_13420 0.37 +1.0 3,130,391 - CA264_13420 0.37 -0.4 3,130,454 + CA264_13420 0.71 -0.4 3,130,504 - -0.6 3,130,510 + +0.7 3,130,510 + -0.7 3,130,511 - -0.4 3,130,513 - -0.5 3,130,524 + +1.5 3,130,575 + +0.7 3,130,595 + -1.3 3,130,622 - -0.4 3,130,695 + +1.0 3,130,697 + +0.0 3,130,697 + -1.0 3,130,698 - +0.3 3,130,698 - -0.8 3,130,829 - CA264_13425 0.17 -0.5 3,130,888 - CA264_13425 0.21 -0.5 3,130,890 - CA264_13425 0.21 -0.3 3,130,890 - CA264_13425 0.21 +0.0 3,130,967 + CA264_13425 0.26 +0.2 3,130,967 + CA264_13425 0.26 -0.5 3,130,971 + CA264_13425 0.27 +0.9 3,130,997 - CA264_13425 0.28 +2.0 3,131,012 - CA264_13425 0.30 -0.6 3,131,088 - CA264_13425 0.35 +0.5 3,131,088 - CA264_13425 0.35 -0.4 3,131,158 + CA264_13425 0.40 +0.0 3,131,159 - CA264_13425 0.40 +0.4 3,131,159 - CA264_13425 0.40 +0.2
Or see this region's nucleotide sequence