Experiment: m.b. Dimethyl Sulfoxide 10 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_07760 and CA264_07765 are separated by 236 nucleotides CA264_07765 and CA264_07770 are separated by 104 nucleotides
CA264_07760: CA264_07760 - acetyl-CoA carboxylase biotin carboxylase subunit, at 1,796,988 to 1,798,334
_07760
CA264_07765: CA264_07765 - hypothetical protein, at 1,798,571 to 1,799,407
_07765
CA264_07770: CA264_07770 - hypothetical protein, at 1,799,512 to 1,800,936
_07770
Position (kb)
1798
1799
1800 Strain fitness (log2 ratio)
-1
0
1
2 at 1798.363 kb on + strand at 1798.363 kb on + strand at 1798.363 kb on + strand at 1798.371 kb on + strand at 1798.411 kb on + strand at 1798.411 kb on + strand at 1798.411 kb on + strand at 1798.411 kb on + strand at 1798.411 kb on + strand at 1798.412 kb on - strand at 1798.412 kb on - strand at 1798.412 kb on - strand at 1798.412 kb on - strand at 1798.441 kb on - strand at 1798.442 kb on + strand at 1798.443 kb on - strand at 1798.445 kb on + strand at 1798.446 kb on - strand at 1798.453 kb on + strand at 1798.453 kb on + strand at 1798.454 kb on - strand at 1798.462 kb on + strand at 1798.473 kb on + strand at 1798.473 kb on + strand at 1798.555 kb on - strand at 1798.556 kb on + strand at 1798.590 kb on + strand at 1798.590 kb on + strand at 1798.611 kb on + strand at 1798.650 kb on + strand at 1798.650 kb on + strand at 1798.651 kb on - strand at 1798.692 kb on - strand, within CA264_07765 at 1798.700 kb on + strand, within CA264_07765 at 1798.735 kb on + strand, within CA264_07765 at 1798.814 kb on + strand, within CA264_07765 at 1798.814 kb on + strand, within CA264_07765 at 1798.815 kb on - strand, within CA264_07765 at 1798.874 kb on - strand, within CA264_07765 at 1798.874 kb on - strand, within CA264_07765 at 1798.928 kb on + strand, within CA264_07765 at 1798.957 kb on + strand, within CA264_07765 at 1798.983 kb on + strand, within CA264_07765 at 1799.015 kb on + strand, within CA264_07765 at 1799.117 kb on + strand, within CA264_07765 at 1799.165 kb on + strand, within CA264_07765 at 1799.239 kb on - strand, within CA264_07765 at 1799.263 kb on + strand, within CA264_07765 at 1799.264 kb on - strand, within CA264_07765 at 1799.399 kb on + strand at 1799.400 kb on - strand at 1799.401 kb on + strand at 1799.438 kb on - strand at 1799.447 kb on - strand at 1799.513 kb on + strand at 1799.566 kb on + strand at 1799.758 kb on - strand, within CA264_07770 at 1799.833 kb on + strand, within CA264_07770 at 1799.834 kb on - strand, within CA264_07770 at 1799.848 kb on + strand, within CA264_07770 at 1799.955 kb on - strand, within CA264_07770 at 1799.959 kb on + strand, within CA264_07770 at 1799.960 kb on - strand, within CA264_07770 at 1800.000 kb on + strand, within CA264_07770 at 1800.000 kb on + strand, within CA264_07770 at 1800.001 kb on - strand, within CA264_07770 at 1800.001 kb on - strand, within CA264_07770 at 1800.101 kb on - strand, within CA264_07770 at 1800.128 kb on + strand, within CA264_07770 at 1800.257 kb on + strand, within CA264_07770 at 1800.331 kb on - strand, within CA264_07770
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 10 vol% remove 1,798,363 + -1.4 1,798,363 + +0.1 1,798,363 + +0.8 1,798,371 + -0.7 1,798,411 + +0.8 1,798,411 + +0.4 1,798,411 + -0.5 1,798,411 + +0.1 1,798,411 + -0.5 1,798,412 - -1.0 1,798,412 - +1.7 1,798,412 - +0.1 1,798,412 - -0.2 1,798,441 - -0.4 1,798,442 + -0.3 1,798,443 - -0.5 1,798,445 + -0.5 1,798,446 - -0.0 1,798,453 + +1.7 1,798,453 + -1.6 1,798,454 - -0.2 1,798,462 + -1.0 1,798,473 + -1.3 1,798,473 + +0.2 1,798,555 - -0.0 1,798,556 + -0.7 1,798,590 + +1.1 1,798,590 + -0.3 1,798,611 + +0.1 1,798,650 + -0.1 1,798,650 + +1.6 1,798,651 - -0.5 1,798,692 - CA264_07765 0.14 +0.3 1,798,700 + CA264_07765 0.15 -0.2 1,798,735 + CA264_07765 0.20 -0.0 1,798,814 + CA264_07765 0.29 +0.0 1,798,814 + CA264_07765 0.29 -1.2 1,798,815 - CA264_07765 0.29 +0.3 1,798,874 - CA264_07765 0.36 -0.6 1,798,874 - CA264_07765 0.36 -0.1 1,798,928 + CA264_07765 0.43 +0.3 1,798,957 + CA264_07765 0.46 -0.5 1,798,983 + CA264_07765 0.49 -0.4 1,799,015 + CA264_07765 0.53 +1.5 1,799,117 + CA264_07765 0.65 -0.4 1,799,165 + CA264_07765 0.71 +0.5 1,799,239 - CA264_07765 0.80 -0.2 1,799,263 + CA264_07765 0.83 -0.4 1,799,264 - CA264_07765 0.83 +0.4 1,799,399 + -1.5 1,799,400 - -0.6 1,799,401 + -0.5 1,799,438 - -1.0 1,799,447 - +0.4 1,799,513 + +0.4 1,799,566 + -0.5 1,799,758 - CA264_07770 0.17 +2.4 1,799,833 + CA264_07770 0.23 -0.8 1,799,834 - CA264_07770 0.23 -1.4 1,799,848 + CA264_07770 0.24 -1.0 1,799,955 - CA264_07770 0.31 -0.1 1,799,959 + CA264_07770 0.31 +0.0 1,799,960 - CA264_07770 0.31 +0.8 1,800,000 + CA264_07770 0.34 +0.3 1,800,000 + CA264_07770 0.34 -1.3 1,800,001 - CA264_07770 0.34 -0.2 1,800,001 - CA264_07770 0.34 +1.1 1,800,101 - CA264_07770 0.41 -0.3 1,800,128 + CA264_07770 0.43 +1.3 1,800,257 + CA264_07770 0.52 +0.8 1,800,331 - CA264_07770 0.57 +2.4
Or see this region's nucleotide sequence