Experiment: m.b. Dimethyl Sulfoxide 10 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_07285 and CA264_07290 are separated by 216 nucleotides CA264_07290 and CA264_07295 are separated by 691 nucleotides
CA264_07285: CA264_07285 - alpha-amlyase, at 1,681,854 to 1,683,710
_07285
CA264_07290: CA264_07290 - mechanosensitive ion channel protein MscS, at 1,683,927 to 1,685,015
_07290
CA264_07295: CA264_07295 - helix-turn-helix transcriptional regulator, at 1,685,707 to 1,686,402
_07295
Position (kb)
1683
1684
1685
1686 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1683.006 kb on + strand, within CA264_07285 at 1683.007 kb on - strand, within CA264_07285 at 1683.102 kb on + strand, within CA264_07285 at 1683.103 kb on - strand, within CA264_07285 at 1683.103 kb on - strand, within CA264_07285 at 1683.196 kb on + strand, within CA264_07285 at 1683.197 kb on - strand, within CA264_07285 at 1683.197 kb on - strand, within CA264_07285 at 1683.234 kb on + strand, within CA264_07285 at 1683.234 kb on + strand, within CA264_07285 at 1683.234 kb on + strand, within CA264_07285 at 1683.235 kb on - strand, within CA264_07285 at 1683.235 kb on - strand, within CA264_07285 at 1683.235 kb on - strand, within CA264_07285 at 1683.245 kb on + strand, within CA264_07285 at 1683.265 kb on + strand, within CA264_07285 at 1683.265 kb on + strand, within CA264_07285 at 1683.266 kb on - strand, within CA264_07285 at 1683.266 kb on - strand, within CA264_07285 at 1683.266 kb on - strand, within CA264_07285 at 1683.268 kb on - strand, within CA264_07285 at 1683.268 kb on - strand, within CA264_07285 at 1683.271 kb on - strand, within CA264_07285 at 1683.271 kb on - strand, within CA264_07285 at 1683.357 kb on - strand, within CA264_07285 at 1683.371 kb on + strand, within CA264_07285 at 1683.371 kb on + strand, within CA264_07285 at 1683.472 kb on + strand, within CA264_07285 at 1683.501 kb on + strand, within CA264_07285 at 1683.501 kb on + strand, within CA264_07285 at 1683.501 kb on + strand, within CA264_07285 at 1683.502 kb on - strand, within CA264_07285 at 1683.502 kb on - strand, within CA264_07285 at 1683.502 kb on - strand, within CA264_07285 at 1683.502 kb on - strand, within CA264_07285 at 1683.508 kb on - strand, within CA264_07285 at 1683.601 kb on + strand at 1683.638 kb on + strand at 1683.645 kb on + strand at 1683.847 kb on + strand at 1683.848 kb on - strand at 1683.878 kb on - strand at 1683.881 kb on + strand at 1683.881 kb on + strand at 1683.881 kb on + strand at 1683.881 kb on + strand at 1683.882 kb on - strand at 1683.882 kb on - strand at 1683.882 kb on - strand at 1683.882 kb on - strand at 1683.886 kb on - strand at 1683.890 kb on - strand at 1683.909 kb on + strand at 1683.975 kb on + strand at 1684.000 kb on + strand at 1684.149 kb on + strand, within CA264_07290 at 1684.165 kb on - strand, within CA264_07290 at 1684.228 kb on + strand, within CA264_07290 at 1684.254 kb on - strand, within CA264_07290 at 1684.312 kb on + strand, within CA264_07290 at 1684.395 kb on + strand, within CA264_07290 at 1684.466 kb on - strand, within CA264_07290 at 1684.496 kb on - strand, within CA264_07290 at 1684.529 kb on + strand, within CA264_07290 at 1684.529 kb on + strand, within CA264_07290 at 1684.532 kb on + strand, within CA264_07290 at 1684.533 kb on - strand, within CA264_07290 at 1684.544 kb on + strand, within CA264_07290 at 1684.634 kb on + strand, within CA264_07290 at 1684.657 kb on - strand, within CA264_07290 at 1684.659 kb on - strand, within CA264_07290 at 1684.727 kb on - strand, within CA264_07290 at 1684.842 kb on + strand, within CA264_07290 at 1684.842 kb on + strand, within CA264_07290 at 1684.843 kb on - strand, within CA264_07290 at 1684.850 kb on - strand, within CA264_07290 at 1684.850 kb on - strand, within CA264_07290 at 1684.869 kb on + strand, within CA264_07290 at 1684.870 kb on - strand, within CA264_07290 at 1684.870 kb on - strand, within CA264_07290 at 1684.870 kb on - strand, within CA264_07290 at 1684.872 kb on - strand, within CA264_07290 at 1684.893 kb on - strand, within CA264_07290 at 1685.021 kb on - strand at 1685.035 kb on - strand at 1685.039 kb on + strand at 1685.039 kb on + strand at 1685.039 kb on + strand at 1685.090 kb on + strand at 1685.091 kb on - strand at 1685.144 kb on + strand at 1685.145 kb on - strand at 1685.175 kb on + strand at 1685.219 kb on + strand at 1685.219 kb on + strand at 1685.219 kb on + strand at 1685.224 kb on - strand at 1685.224 kb on - strand at 1685.279 kb on - strand at 1685.280 kb on + strand at 1685.298 kb on + strand at 1685.306 kb on + strand at 1685.307 kb on - strand at 1685.307 kb on - strand at 1685.309 kb on - strand at 1685.324 kb on - strand at 1685.338 kb on + strand at 1685.350 kb on + strand at 1685.397 kb on - strand at 1685.412 kb on + strand at 1685.412 kb on + strand at 1685.413 kb on - strand at 1685.413 kb on - strand at 1685.520 kb on - strand at 1685.520 kb on - strand at 1685.521 kb on + strand at 1685.521 kb on + strand at 1685.522 kb on - strand at 1685.608 kb on + strand at 1685.618 kb on + strand at 1685.618 kb on + strand at 1685.619 kb on - strand at 1685.619 kb on - strand at 1685.688 kb on + strand at 1685.704 kb on + strand at 1685.861 kb on - strand, within CA264_07295 at 1685.959 kb on + strand, within CA264_07295
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 10 vol% remove 1,683,006 + CA264_07285 0.62 +1.5 1,683,007 - CA264_07285 0.62 -1.3 1,683,102 + CA264_07285 0.67 +1.6 1,683,103 - CA264_07285 0.67 +2.1 1,683,103 - CA264_07285 0.67 +2.0 1,683,196 + CA264_07285 0.72 +0.8 1,683,197 - CA264_07285 0.72 +0.4 1,683,197 - CA264_07285 0.72 +0.6 1,683,234 + CA264_07285 0.74 +0.5 1,683,234 + CA264_07285 0.74 +2.6 1,683,234 + CA264_07285 0.74 -0.2 1,683,235 - CA264_07285 0.74 +0.8 1,683,235 - CA264_07285 0.74 +0.8 1,683,235 - CA264_07285 0.74 +0.7 1,683,245 + CA264_07285 0.75 -0.2 1,683,265 + CA264_07285 0.76 +1.2 1,683,265 + CA264_07285 0.76 -0.5 1,683,266 - CA264_07285 0.76 +0.5 1,683,266 - CA264_07285 0.76 +0.6 1,683,266 - CA264_07285 0.76 +1.0 1,683,268 - CA264_07285 0.76 +1.2 1,683,268 - CA264_07285 0.76 +1.4 1,683,271 - CA264_07285 0.76 +1.2 1,683,271 - CA264_07285 0.76 +0.6 1,683,357 - CA264_07285 0.81 +1.0 1,683,371 + CA264_07285 0.82 +0.1 1,683,371 + CA264_07285 0.82 -0.3 1,683,472 + CA264_07285 0.87 +1.4 1,683,501 + CA264_07285 0.89 +0.3 1,683,501 + CA264_07285 0.89 +0.8 1,683,501 + CA264_07285 0.89 +1.8 1,683,502 - CA264_07285 0.89 -0.3 1,683,502 - CA264_07285 0.89 +0.7 1,683,502 - CA264_07285 0.89 +0.2 1,683,502 - CA264_07285 0.89 +0.2 1,683,508 - CA264_07285 0.89 +0.7 1,683,601 + +0.2 1,683,638 + +1.6 1,683,645 + -0.2 1,683,847 + +0.2 1,683,848 - +0.3 1,683,878 - +1.3 1,683,881 + +0.8 1,683,881 + +1.5 1,683,881 + +0.3 1,683,881 + +0.8 1,683,882 - +0.5 1,683,882 - -0.1 1,683,882 - -0.8 1,683,882 - -0.2 1,683,886 - +0.8 1,683,890 - +0.8 1,683,909 + +1.3 1,683,975 + +0.5 1,684,000 + +0.5 1,684,149 + CA264_07290 0.20 +0.5 1,684,165 - CA264_07290 0.22 +0.6 1,684,228 + CA264_07290 0.28 -0.2 1,684,254 - CA264_07290 0.30 -1.4 1,684,312 + CA264_07290 0.35 -0.2 1,684,395 + CA264_07290 0.43 +0.0 1,684,466 - CA264_07290 0.49 -1.8 1,684,496 - CA264_07290 0.52 +0.4 1,684,529 + CA264_07290 0.55 -0.4 1,684,529 + CA264_07290 0.55 -0.7 1,684,532 + CA264_07290 0.56 -0.2 1,684,533 - CA264_07290 0.56 +0.8 1,684,544 + CA264_07290 0.57 -0.2 1,684,634 + CA264_07290 0.65 +1.2 1,684,657 - CA264_07290 0.67 +1.2 1,684,659 - CA264_07290 0.67 -0.1 1,684,727 - CA264_07290 0.73 -0.9 1,684,842 + CA264_07290 0.84 -0.3 1,684,842 + CA264_07290 0.84 -0.0 1,684,843 - CA264_07290 0.84 -2.2 1,684,850 - CA264_07290 0.85 -0.1 1,684,850 - CA264_07290 0.85 -0.6 1,684,869 + CA264_07290 0.87 -0.0 1,684,870 - CA264_07290 0.87 +0.7 1,684,870 - CA264_07290 0.87 -0.3 1,684,870 - CA264_07290 0.87 -0.8 1,684,872 - CA264_07290 0.87 -1.0 1,684,893 - CA264_07290 0.89 -0.5 1,685,021 - -1.2 1,685,035 - +0.7 1,685,039 + +0.1 1,685,039 + +0.0 1,685,039 + +0.8 1,685,090 + -1.0 1,685,091 - -0.1 1,685,144 + +0.3 1,685,145 - -0.6 1,685,175 + +0.7 1,685,219 + +0.1 1,685,219 + -0.1 1,685,219 + +0.2 1,685,224 - -0.0 1,685,224 - -0.2 1,685,279 - -0.9 1,685,280 + -0.3 1,685,298 + +0.7 1,685,306 + -0.7 1,685,307 - -0.1 1,685,307 - -0.5 1,685,309 - -0.4 1,685,324 - -1.5 1,685,338 + -0.2 1,685,350 + -0.0 1,685,397 - -0.3 1,685,412 + +1.4 1,685,412 + -0.1 1,685,413 - +0.3 1,685,413 - -1.0 1,685,520 - +0.1 1,685,520 - +0.6 1,685,521 + -0.5 1,685,521 + +1.1 1,685,522 - -0.3 1,685,608 + -0.2 1,685,618 + +0.2 1,685,618 + +0.2 1,685,619 - +1.4 1,685,619 - -0.9 1,685,688 + -2.0 1,685,704 + +0.8 1,685,861 - CA264_07295 0.22 -0.3 1,685,959 + CA264_07295 0.36 -1.5
Or see this region's nucleotide sequence