Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_06460

Experiment: m.b. Dimethyl Sulfoxide 10 vol%

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_06450 and CA264_06455 are separated by 126 nucleotidesCA264_06455 and CA264_06460 overlap by 44 nucleotidesCA264_06460 and CA264_06465 are separated by 110 nucleotidesCA264_06465 and CA264_06470 are separated by 229 nucleotides CA264_06450: CA264_06450 - hypothetical protein, at 1,493,853 to 1,494,740 _06450 CA264_06455: CA264_06455 - pantetheine-phosphate adenylyltransferase, at 1,494,867 to 1,495,343 _06455 CA264_06460: CA264_06460 - NUDIX domain-containing protein, at 1,495,300 to 1,495,980 _06460 CA264_06465: CA264_06465 - orotate phosphoribosyltransferase, at 1,496,091 to 1,496,729 _06465 CA264_06470: CA264_06470 - YfcE family phosphodiesterase, at 1,496,959 to 1,497,459 _06470 Position (kb) 1495 1496Strain fitness (log2 ratio) -2 -1 0 1 2at 1494.412 kb on - strand, within CA264_06450at 1494.432 kb on + strand, within CA264_06450at 1494.432 kb on + strand, within CA264_06450at 1494.433 kb on - strand, within CA264_06450at 1494.436 kb on + strand, within CA264_06450at 1494.437 kb on - strand, within CA264_06450at 1494.480 kb on - strand, within CA264_06450at 1494.517 kb on - strand, within CA264_06450at 1494.614 kb on - strand, within CA264_06450at 1494.624 kb on + strand, within CA264_06450at 1494.625 kb on - strand, within CA264_06450at 1494.638 kb on - strand, within CA264_06450at 1494.638 kb on - strand, within CA264_06450at 1494.669 kb on + strandat 1494.670 kb on - strandat 1494.676 kb on - strandat 1494.676 kb on - strandat 1494.677 kb on + strandat 1494.717 kb on + strandat 1494.773 kb on + strandat 1494.773 kb on + strandat 1494.806 kb on + strandat 1494.806 kb on + strandat 1494.806 kb on + strandat 1494.828 kb on + strandat 1494.829 kb on - strandat 1494.829 kb on - strandat 1495.331 kb on + strandat 1495.361 kb on + strandat 1495.473 kb on - strand, within CA264_06460at 1495.559 kb on - strand, within CA264_06460at 1495.559 kb on - strand, within CA264_06460at 1495.559 kb on - strand, within CA264_06460at 1495.559 kb on - strand, within CA264_06460at 1495.559 kb on - strand, within CA264_06460at 1495.681 kb on - strand, within CA264_06460at 1495.879 kb on - strand, within CA264_06460at 1495.910 kb on + strand, within CA264_06460at 1495.910 kb on + strand, within CA264_06460at 1495.921 kb on - strandat 1495.921 kb on - strandat 1495.923 kb on - strandat 1495.983 kb on - strandat 1495.983 kb on - strandat 1496.009 kb on - strandat 1496.105 kb on + strandat 1496.120 kb on - strandat 1496.202 kb on - strand, within CA264_06465at 1496.205 kb on + strand, within CA264_06465at 1496.243 kb on - strand, within CA264_06465at 1496.243 kb on - strand, within CA264_06465at 1496.243 kb on - strand, within CA264_06465at 1496.243 kb on - strand, within CA264_06465at 1496.246 kb on + strand, within CA264_06465at 1496.252 kb on + strand, within CA264_06465at 1496.290 kb on - strand, within CA264_06465at 1496.437 kb on + strand, within CA264_06465at 1496.545 kb on + strand, within CA264_06465at 1496.545 kb on + strand, within CA264_06465at 1496.549 kb on + strand, within CA264_06465at 1496.549 kb on + strand, within CA264_06465at 1496.549 kb on + strand, within CA264_06465at 1496.621 kb on + strand, within CA264_06465at 1496.625 kb on + strand, within CA264_06465at 1496.662 kb on - strand, within CA264_06465at 1496.726 kb on - strandat 1496.727 kb on + strandat 1496.728 kb on - strandat 1496.728 kb on - strandat 1496.766 kb on - strandat 1496.768 kb on - strandat 1496.822 kb on + strandat 1496.844 kb on + strandat 1496.902 kb on + strandat 1496.911 kb on - strandat 1496.911 kb on - strandat 1496.958 kb on + strandat 1496.958 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 10 vol%
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1,494,412 - CA264_06450 0.63 +0.5
1,494,432 + CA264_06450 0.65 -0.4
1,494,432 + CA264_06450 0.65 -0.8
1,494,433 - CA264_06450 0.65 +0.0
1,494,436 + CA264_06450 0.66 -0.4
1,494,437 - CA264_06450 0.66 +0.7
1,494,480 - CA264_06450 0.71 +0.2
1,494,517 - CA264_06450 0.75 +0.5
1,494,614 - CA264_06450 0.86 +0.3
1,494,624 + CA264_06450 0.87 -0.4
1,494,625 - CA264_06450 0.87 +0.1
1,494,638 - CA264_06450 0.88 +0.3
1,494,638 - CA264_06450 0.88 +0.0
1,494,669 + -0.4
1,494,670 - +0.8
1,494,676 - -0.5
1,494,676 - +2.1
1,494,677 + +0.0
1,494,717 + +0.1
1,494,773 + +0.1
1,494,773 + -2.0
1,494,806 + -0.1
1,494,806 + -0.8
1,494,806 + -0.4
1,494,828 + +0.2
1,494,829 - -0.2
1,494,829 - -0.3
1,495,331 + -0.2
1,495,361 + +1.4
1,495,473 - CA264_06460 0.25 +1.4
1,495,559 - CA264_06460 0.38 -0.4
1,495,559 - CA264_06460 0.38 +0.1
1,495,559 - CA264_06460 0.38 -1.8
1,495,559 - CA264_06460 0.38 +1.1
1,495,559 - CA264_06460 0.38 +1.4
1,495,681 - CA264_06460 0.56 -0.7
1,495,879 - CA264_06460 0.85 +0.3
1,495,910 + CA264_06460 0.90 -0.2
1,495,910 + CA264_06460 0.90 -0.8
1,495,921 - +1.1
1,495,921 - -1.1
1,495,923 - +0.3
1,495,983 - +0.3
1,495,983 - +0.1
1,496,009 - -1.2
1,496,105 + -0.2
1,496,120 - -0.1
1,496,202 - CA264_06465 0.17 -0.3
1,496,205 + CA264_06465 0.18 -0.2
1,496,243 - CA264_06465 0.24 +0.3
1,496,243 - CA264_06465 0.24 -0.8
1,496,243 - CA264_06465 0.24 -0.2
1,496,243 - CA264_06465 0.24 -1.2
1,496,246 + CA264_06465 0.24 -2.2
1,496,252 + CA264_06465 0.25 -0.2
1,496,290 - CA264_06465 0.31 -0.4
1,496,437 + CA264_06465 0.54 -0.9
1,496,545 + CA264_06465 0.71 +0.8
1,496,545 + CA264_06465 0.71 -0.3
1,496,549 + CA264_06465 0.72 +1.8
1,496,549 + CA264_06465 0.72 -0.3
1,496,549 + CA264_06465 0.72 -0.3
1,496,621 + CA264_06465 0.83 +0.3
1,496,625 + CA264_06465 0.84 -0.2
1,496,662 - CA264_06465 0.89 +1.1
1,496,726 - -0.3
1,496,727 + +0.8
1,496,728 - -1.6
1,496,728 - +0.3
1,496,766 - -0.4
1,496,768 - +0.2
1,496,822 + -2.5
1,496,844 + +0.2
1,496,902 + +1.1
1,496,911 - -1.2
1,496,911 - -1.5
1,496,958 + +0.8
1,496,958 + -0.2

Or see this region's nucleotide sequence