Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_06450

Experiment: m.b. Dimethyl Sulfoxide 10 vol%

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_06440 and CA264_06445 are separated by 37 nucleotidesCA264_06445 and CA264_06450 are separated by 90 nucleotidesCA264_06450 and CA264_06455 are separated by 126 nucleotidesCA264_06455 and CA264_06460 overlap by 44 nucleotides CA264_06440: CA264_06440 - thioesterase, at 1,492,769 to 1,493,239 _06440 CA264_06445: CA264_06445 - NUDIX hydrolase, at 1,493,277 to 1,493,762 _06445 CA264_06450: CA264_06450 - hypothetical protein, at 1,493,853 to 1,494,740 _06450 CA264_06455: CA264_06455 - pantetheine-phosphate adenylyltransferase, at 1,494,867 to 1,495,343 _06455 CA264_06460: CA264_06460 - NUDIX domain-containing protein, at 1,495,300 to 1,495,980 _06460 Position (kb) 1493 1494 1495Strain fitness (log2 ratio) -2 -1 0 1 2at 1492.878 kb on + strand, within CA264_06440at 1492.878 kb on + strand, within CA264_06440at 1492.878 kb on + strand, within CA264_06440at 1492.879 kb on - strand, within CA264_06440at 1492.879 kb on - strand, within CA264_06440at 1492.926 kb on + strand, within CA264_06440at 1492.968 kb on + strand, within CA264_06440at 1493.042 kb on + strand, within CA264_06440at 1493.126 kb on + strand, within CA264_06440at 1493.126 kb on + strand, within CA264_06440at 1493.127 kb on - strand, within CA264_06440at 1493.141 kb on + strand, within CA264_06440at 1493.142 kb on - strand, within CA264_06440at 1493.201 kb on + strandat 1493.201 kb on + strandat 1493.202 kb on - strandat 1493.202 kb on - strandat 1493.226 kb on + strandat 1493.227 kb on - strandat 1493.227 kb on - strandat 1493.362 kb on + strand, within CA264_06445at 1493.444 kb on + strand, within CA264_06445at 1493.569 kb on + strand, within CA264_06445at 1493.668 kb on + strand, within CA264_06445at 1493.668 kb on + strand, within CA264_06445at 1493.749 kb on - strandat 1493.761 kb on - strandat 1493.761 kb on - strandat 1493.894 kb on - strandat 1493.894 kb on - strandat 1493.894 kb on - strandat 1493.940 kb on + strandat 1493.941 kb on - strandat 1494.193 kb on - strand, within CA264_06450at 1494.243 kb on + strand, within CA264_06450at 1494.297 kb on + strand, within CA264_06450at 1494.412 kb on - strand, within CA264_06450at 1494.432 kb on + strand, within CA264_06450at 1494.432 kb on + strand, within CA264_06450at 1494.433 kb on - strand, within CA264_06450at 1494.436 kb on + strand, within CA264_06450at 1494.437 kb on - strand, within CA264_06450at 1494.480 kb on - strand, within CA264_06450at 1494.517 kb on - strand, within CA264_06450at 1494.614 kb on - strand, within CA264_06450at 1494.624 kb on + strand, within CA264_06450at 1494.625 kb on - strand, within CA264_06450at 1494.638 kb on - strand, within CA264_06450at 1494.638 kb on - strand, within CA264_06450at 1494.669 kb on + strandat 1494.670 kb on - strandat 1494.676 kb on - strandat 1494.676 kb on - strandat 1494.677 kb on + strandat 1494.717 kb on + strandat 1494.773 kb on + strandat 1494.773 kb on + strandat 1494.806 kb on + strandat 1494.806 kb on + strandat 1494.806 kb on + strandat 1494.828 kb on + strandat 1494.829 kb on - strandat 1494.829 kb on - strandat 1495.331 kb on + strandat 1495.361 kb on + strandat 1495.473 kb on - strand, within CA264_06460at 1495.559 kb on - strand, within CA264_06460at 1495.559 kb on - strand, within CA264_06460at 1495.559 kb on - strand, within CA264_06460at 1495.559 kb on - strand, within CA264_06460at 1495.559 kb on - strand, within CA264_06460at 1495.681 kb on - strand, within CA264_06460

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 10 vol%
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1,492,878 + CA264_06440 0.23 +0.2
1,492,878 + CA264_06440 0.23 +0.4
1,492,878 + CA264_06440 0.23 -0.3
1,492,879 - CA264_06440 0.23 -0.4
1,492,879 - CA264_06440 0.23 +0.3
1,492,926 + CA264_06440 0.33 -0.4
1,492,968 + CA264_06440 0.42 -0.1
1,493,042 + CA264_06440 0.58 +1.1
1,493,126 + CA264_06440 0.76 +0.0
1,493,126 + CA264_06440 0.76 -0.7
1,493,127 - CA264_06440 0.76 -0.4
1,493,141 + CA264_06440 0.79 -0.3
1,493,142 - CA264_06440 0.79 -0.4
1,493,201 + -0.8
1,493,201 + -0.5
1,493,202 - -0.0
1,493,202 - +0.2
1,493,226 + -0.2
1,493,227 - -0.3
1,493,227 - -0.7
1,493,362 + CA264_06445 0.17 +1.6
1,493,444 + CA264_06445 0.34 +0.8
1,493,569 + CA264_06445 0.60 +0.2
1,493,668 + CA264_06445 0.80 +0.1
1,493,668 + CA264_06445 0.80 +0.5
1,493,749 - -0.8
1,493,761 - -1.1
1,493,761 - -0.5
1,493,894 - -0.8
1,493,894 - -1.6
1,493,894 - +0.7
1,493,940 + -0.8
1,493,941 - +0.1
1,494,193 - CA264_06450 0.38 +0.3
1,494,243 + CA264_06450 0.44 +0.7
1,494,297 + CA264_06450 0.50 +0.4
1,494,412 - CA264_06450 0.63 +0.5
1,494,432 + CA264_06450 0.65 -0.4
1,494,432 + CA264_06450 0.65 -0.8
1,494,433 - CA264_06450 0.65 +0.0
1,494,436 + CA264_06450 0.66 -0.4
1,494,437 - CA264_06450 0.66 +0.7
1,494,480 - CA264_06450 0.71 +0.2
1,494,517 - CA264_06450 0.75 +0.5
1,494,614 - CA264_06450 0.86 +0.3
1,494,624 + CA264_06450 0.87 -0.4
1,494,625 - CA264_06450 0.87 +0.1
1,494,638 - CA264_06450 0.88 +0.3
1,494,638 - CA264_06450 0.88 +0.0
1,494,669 + -0.4
1,494,670 - +0.8
1,494,676 - -0.5
1,494,676 - +2.1
1,494,677 + +0.0
1,494,717 + +0.1
1,494,773 + +0.1
1,494,773 + -2.0
1,494,806 + -0.1
1,494,806 + -0.8
1,494,806 + -0.4
1,494,828 + +0.2
1,494,829 - -0.2
1,494,829 - -0.3
1,495,331 + -0.2
1,495,361 + +1.4
1,495,473 - CA264_06460 0.25 +1.4
1,495,559 - CA264_06460 0.38 -0.4
1,495,559 - CA264_06460 0.38 +0.1
1,495,559 - CA264_06460 0.38 -1.8
1,495,559 - CA264_06460 0.38 +1.1
1,495,559 - CA264_06460 0.38 +1.4
1,495,681 - CA264_06460 0.56 -0.7

Or see this region's nucleotide sequence