Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_04585

Experiment: m.b. Dimethyl Sulfoxide 10 vol%

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_04580 and CA264_04585 are separated by 21 nucleotidesCA264_04585 and CA264_04590 are separated by 7 nucleotides CA264_04580: CA264_04580 - hypothetical protein, at 1,058,989 to 1,060,236 _04580 CA264_04585: CA264_04585 - hypothetical protein, at 1,060,258 to 1,061,337 _04585 CA264_04590: CA264_04590 - hypothetical protein, at 1,061,345 to 1,062,676 _04590 Position (kb) 1060 1061 1062Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 1059.293 kb on + strand, within CA264_04580at 1059.298 kb on + strand, within CA264_04580at 1059.299 kb on - strand, within CA264_04580at 1059.331 kb on + strand, within CA264_04580at 1059.332 kb on - strand, within CA264_04580at 1059.339 kb on + strand, within CA264_04580at 1059.398 kb on - strand, within CA264_04580at 1059.399 kb on + strand, within CA264_04580at 1059.399 kb on + strand, within CA264_04580at 1059.399 kb on + strand, within CA264_04580at 1059.399 kb on + strand, within CA264_04580at 1059.399 kb on + strand, within CA264_04580at 1059.431 kb on + strand, within CA264_04580at 1059.431 kb on + strand, within CA264_04580at 1059.432 kb on - strand, within CA264_04580at 1059.432 kb on - strand, within CA264_04580at 1059.466 kb on - strand, within CA264_04580at 1059.484 kb on + strand, within CA264_04580at 1059.522 kb on - strand, within CA264_04580at 1059.690 kb on + strand, within CA264_04580at 1059.693 kb on + strand, within CA264_04580at 1059.693 kb on + strand, within CA264_04580at 1059.693 kb on + strand, within CA264_04580at 1059.699 kb on + strand, within CA264_04580at 1059.704 kb on + strand, within CA264_04580at 1059.704 kb on + strand, within CA264_04580at 1059.704 kb on + strand, within CA264_04580at 1059.704 kb on + strand, within CA264_04580at 1059.704 kb on + strand, within CA264_04580at 1059.800 kb on + strand, within CA264_04580at 1059.801 kb on - strand, within CA264_04580at 1059.887 kb on + strand, within CA264_04580at 1059.988 kb on - strand, within CA264_04580at 1059.996 kb on + strand, within CA264_04580at 1059.998 kb on + strand, within CA264_04580at 1059.998 kb on + strand, within CA264_04580at 1060.012 kb on + strand, within CA264_04580at 1060.037 kb on + strand, within CA264_04580at 1060.038 kb on - strand, within CA264_04580at 1060.039 kb on + strand, within CA264_04580at 1060.039 kb on + strand, within CA264_04580at 1060.081 kb on + strand, within CA264_04580at 1060.190 kb on - strandat 1060.190 kb on - strandat 1060.207 kb on + strandat 1060.207 kb on + strandat 1060.207 kb on + strandat 1060.259 kb on + strandat 1060.260 kb on - strandat 1060.260 kb on - strandat 1060.291 kb on - strandat 1060.291 kb on - strandat 1060.333 kb on - strandat 1060.338 kb on + strandat 1060.395 kb on + strand, within CA264_04585at 1060.396 kb on - strand, within CA264_04585at 1060.423 kb on + strand, within CA264_04585at 1060.436 kb on + strand, within CA264_04585at 1060.441 kb on - strand, within CA264_04585at 1060.457 kb on - strand, within CA264_04585at 1060.457 kb on - strand, within CA264_04585at 1060.457 kb on - strand, within CA264_04585at 1060.542 kb on - strand, within CA264_04585at 1060.672 kb on - strand, within CA264_04585at 1060.683 kb on + strand, within CA264_04585at 1060.684 kb on - strand, within CA264_04585at 1060.709 kb on - strand, within CA264_04585at 1060.739 kb on - strand, within CA264_04585at 1060.785 kb on + strand, within CA264_04585at 1060.800 kb on - strand, within CA264_04585at 1060.800 kb on - strand, within CA264_04585at 1060.802 kb on - strand, within CA264_04585at 1060.802 kb on - strand, within CA264_04585at 1060.802 kb on - strand, within CA264_04585at 1060.806 kb on + strand, within CA264_04585at 1060.942 kb on - strand, within CA264_04585at 1060.963 kb on - strand, within CA264_04585at 1060.969 kb on - strand, within CA264_04585at 1060.972 kb on - strand, within CA264_04585at 1061.028 kb on + strand, within CA264_04585at 1061.029 kb on - strand, within CA264_04585at 1061.029 kb on - strand, within CA264_04585at 1061.047 kb on + strand, within CA264_04585at 1061.055 kb on - strand, within CA264_04585at 1061.056 kb on + strand, within CA264_04585at 1061.056 kb on + strand, within CA264_04585at 1061.056 kb on + strand, within CA264_04585at 1061.056 kb on + strand, within CA264_04585at 1061.057 kb on - strand, within CA264_04585at 1061.065 kb on + strand, within CA264_04585at 1061.065 kb on + strand, within CA264_04585at 1061.065 kb on + strand, within CA264_04585at 1061.065 kb on + strand, within CA264_04585at 1061.066 kb on - strand, within CA264_04585at 1061.066 kb on - strand, within CA264_04585at 1061.066 kb on - strand, within CA264_04585at 1061.067 kb on + strand, within CA264_04585at 1061.067 kb on + strand, within CA264_04585at 1061.092 kb on + strand, within CA264_04585at 1061.094 kb on + strand, within CA264_04585at 1061.094 kb on + strand, within CA264_04585at 1061.098 kb on + strand, within CA264_04585at 1061.099 kb on - strand, within CA264_04585at 1061.099 kb on - strand, within CA264_04585at 1061.099 kb on - strand, within CA264_04585at 1061.113 kb on - strand, within CA264_04585at 1061.113 kb on - strand, within CA264_04585at 1061.165 kb on - strand, within CA264_04585at 1061.184 kb on - strand, within CA264_04585at 1061.204 kb on - strand, within CA264_04585at 1061.206 kb on + strand, within CA264_04585at 1061.206 kb on + strand, within CA264_04585at 1061.207 kb on - strand, within CA264_04585at 1061.226 kb on + strand, within CA264_04585at 1061.232 kb on - strandat 1061.232 kb on - strandat 1061.232 kb on - strandat 1061.234 kb on - strandat 1061.234 kb on - strandat 1061.287 kb on - strandat 1061.289 kb on + strandat 1061.290 kb on - strandat 1061.309 kb on + strandat 1061.310 kb on - strandat 1061.310 kb on - strandat 1061.318 kb on - strandat 1061.379 kb on - strandat 1061.384 kb on + strandat 1061.384 kb on + strandat 1061.384 kb on + strandat 1061.384 kb on + strandat 1061.385 kb on - strandat 1061.388 kb on + strandat 1061.388 kb on + strandat 1061.389 kb on - strandat 1061.389 kb on - strandat 1061.389 kb on - strandat 1061.413 kb on + strandat 1061.421 kb on + strandat 1061.426 kb on + strandat 1061.426 kb on + strandat 1061.427 kb on - strandat 1061.427 kb on - strandat 1061.427 kb on - strandat 1061.522 kb on + strand, within CA264_04590at 1061.552 kb on - strand, within CA264_04590at 1061.594 kb on + strand, within CA264_04590at 1061.637 kb on + strand, within CA264_04590at 1061.638 kb on - strand, within CA264_04590at 1061.638 kb on - strand, within CA264_04590at 1061.705 kb on + strand, within CA264_04590at 1061.707 kb on + strand, within CA264_04590at 1061.708 kb on - strand, within CA264_04590at 1061.708 kb on - strand, within CA264_04590at 1061.708 kb on - strand, within CA264_04590at 1061.724 kb on + strand, within CA264_04590at 1061.725 kb on - strand, within CA264_04590at 1061.726 kb on + strand, within CA264_04590at 1061.727 kb on - strand, within CA264_04590at 1061.727 kb on - strand, within CA264_04590at 1061.740 kb on + strand, within CA264_04590at 1061.750 kb on - strand, within CA264_04590at 1061.807 kb on + strand, within CA264_04590at 1061.807 kb on + strand, within CA264_04590at 1061.808 kb on - strand, within CA264_04590at 1061.808 kb on - strand, within CA264_04590at 1061.821 kb on + strand, within CA264_04590at 1061.821 kb on + strand, within CA264_04590at 1061.822 kb on - strand, within CA264_04590at 1061.829 kb on + strand, within CA264_04590at 1061.864 kb on + strand, within CA264_04590at 1061.870 kb on - strand, within CA264_04590at 1061.870 kb on - strand, within CA264_04590at 1061.877 kb on - strand, within CA264_04590at 1061.911 kb on - strand, within CA264_04590at 1061.936 kb on + strand, within CA264_04590at 1061.936 kb on + strand, within CA264_04590at 1061.936 kb on + strand, within CA264_04590at 1061.936 kb on + strand, within CA264_04590at 1061.937 kb on - strand, within CA264_04590at 1061.940 kb on - strand, within CA264_04590at 1061.940 kb on - strand, within CA264_04590at 1061.968 kb on + strand, within CA264_04590at 1061.968 kb on + strand, within CA264_04590at 1061.969 kb on - strand, within CA264_04590at 1061.969 kb on - strand, within CA264_04590at 1061.978 kb on + strand, within CA264_04590at 1061.978 kb on + strand, within CA264_04590at 1061.978 kb on + strand, within CA264_04590at 1061.978 kb on + strand, within CA264_04590at 1061.979 kb on - strand, within CA264_04590at 1061.979 kb on - strand, within CA264_04590at 1061.988 kb on - strand, within CA264_04590at 1061.998 kb on + strand, within CA264_04590at 1062.004 kb on + strand, within CA264_04590at 1062.033 kb on + strand, within CA264_04590at 1062.034 kb on - strand, within CA264_04590at 1062.039 kb on + strand, within CA264_04590at 1062.043 kb on + strand, within CA264_04590at 1062.043 kb on + strand, within CA264_04590at 1062.043 kb on + strand, within CA264_04590at 1062.044 kb on - strand, within CA264_04590at 1062.044 kb on - strand, within CA264_04590at 1062.047 kb on - strand, within CA264_04590at 1062.051 kb on + strand, within CA264_04590at 1062.074 kb on - strand, within CA264_04590at 1062.085 kb on - strand, within CA264_04590at 1062.122 kb on + strand, within CA264_04590at 1062.123 kb on - strand, within CA264_04590at 1062.123 kb on - strand, within CA264_04590at 1062.125 kb on - strand, within CA264_04590at 1062.125 kb on - strand, within CA264_04590at 1062.125 kb on - strand, within CA264_04590at 1062.135 kb on + strand, within CA264_04590at 1062.136 kb on - strand, within CA264_04590at 1062.223 kb on + strand, within CA264_04590at 1062.224 kb on - strand, within CA264_04590at 1062.224 kb on - strand, within CA264_04590at 1062.237 kb on - strand, within CA264_04590at 1062.254 kb on + strand, within CA264_04590at 1062.255 kb on - strand, within CA264_04590at 1062.257 kb on + strand, within CA264_04590at 1062.258 kb on - strand, within CA264_04590at 1062.299 kb on - strand, within CA264_04590at 1062.301 kb on - strand, within CA264_04590at 1062.319 kb on - strand, within CA264_04590at 1062.319 kb on - strand, within CA264_04590at 1062.329 kb on - strand, within CA264_04590at 1062.331 kb on + strand, within CA264_04590at 1062.331 kb on + strand, within CA264_04590at 1062.335 kb on + strand, within CA264_04590

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 10 vol%
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1,059,293 + CA264_04580 0.24 -3.5
1,059,298 + CA264_04580 0.25 -0.7
1,059,299 - CA264_04580 0.25 -3.0
1,059,331 + CA264_04580 0.27 -2.7
1,059,332 - CA264_04580 0.27 -0.7
1,059,339 + CA264_04580 0.28 -1.1
1,059,398 - CA264_04580 0.33 -2.5
1,059,399 + CA264_04580 0.33 -2.4
1,059,399 + CA264_04580 0.33 -0.1
1,059,399 + CA264_04580 0.33 -2.5
1,059,399 + CA264_04580 0.33 +1.9
1,059,399 + CA264_04580 0.33 -1.8
1,059,431 + CA264_04580 0.35 -0.3
1,059,431 + CA264_04580 0.35 +1.5
1,059,432 - CA264_04580 0.35 -2.7
1,059,432 - CA264_04580 0.35 +0.3
1,059,466 - CA264_04580 0.38 -1.7
1,059,484 + CA264_04580 0.40 -0.7
1,059,522 - CA264_04580 0.43 +0.9
1,059,690 + CA264_04580 0.56 -2.1
1,059,693 + CA264_04580 0.56 -0.9
1,059,693 + CA264_04580 0.56 -0.8
1,059,693 + CA264_04580 0.56 -1.9
1,059,699 + CA264_04580 0.57 +0.9
1,059,704 + CA264_04580 0.57 -1.8
1,059,704 + CA264_04580 0.57 +0.9
1,059,704 + CA264_04580 0.57 -1.3
1,059,704 + CA264_04580 0.57 -1.5
1,059,704 + CA264_04580 0.57 +0.1
1,059,800 + CA264_04580 0.65 +0.6
1,059,801 - CA264_04580 0.65 -2.8
1,059,887 + CA264_04580 0.72 -0.6
1,059,988 - CA264_04580 0.80 -2.9
1,059,996 + CA264_04580 0.81 -1.9
1,059,998 + CA264_04580 0.81 -1.0
1,059,998 + CA264_04580 0.81 -0.5
1,060,012 + CA264_04580 0.82 -0.7
1,060,037 + CA264_04580 0.84 -2.8
1,060,038 - CA264_04580 0.84 -2.7
1,060,039 + CA264_04580 0.84 -1.3
1,060,039 + CA264_04580 0.84 -1.2
1,060,081 + CA264_04580 0.88 -1.7
1,060,190 - -1.8
1,060,190 - -0.2
1,060,207 + -0.8
1,060,207 + -0.8
1,060,207 + +0.3
1,060,259 + -0.1
1,060,260 - +1.3
1,060,260 - -0.2
1,060,291 - -0.7
1,060,291 - -0.1
1,060,333 - -0.9
1,060,338 + -0.3
1,060,395 + CA264_04585 0.13 -1.7
1,060,396 - CA264_04585 0.13 -2.8
1,060,423 + CA264_04585 0.15 -0.5
1,060,436 + CA264_04585 0.16 +1.3
1,060,441 - CA264_04585 0.17 -0.4
1,060,457 - CA264_04585 0.18 -1.1
1,060,457 - CA264_04585 0.18 -1.2
1,060,457 - CA264_04585 0.18 -0.9
1,060,542 - CA264_04585 0.26 +1.5
1,060,672 - CA264_04585 0.38 +0.1
1,060,683 + CA264_04585 0.39 +0.7
1,060,684 - CA264_04585 0.39 -2.0
1,060,709 - CA264_04585 0.42 -0.7
1,060,739 - CA264_04585 0.45 -1.2
1,060,785 + CA264_04585 0.49 -1.0
1,060,800 - CA264_04585 0.50 +0.6
1,060,800 - CA264_04585 0.50 +0.9
1,060,802 - CA264_04585 0.50 -1.4
1,060,802 - CA264_04585 0.50 +0.1
1,060,802 - CA264_04585 0.50 -1.1
1,060,806 + CA264_04585 0.51 -0.3
1,060,942 - CA264_04585 0.63 -2.7
1,060,963 - CA264_04585 0.65 -2.1
1,060,969 - CA264_04585 0.66 -1.4
1,060,972 - CA264_04585 0.66 -0.4
1,061,028 + CA264_04585 0.71 -0.5
1,061,029 - CA264_04585 0.71 +0.5
1,061,029 - CA264_04585 0.71 -0.1
1,061,047 + CA264_04585 0.73 -1.0
1,061,055 - CA264_04585 0.74 -0.1
1,061,056 + CA264_04585 0.74 -0.4
1,061,056 + CA264_04585 0.74 -1.2
1,061,056 + CA264_04585 0.74 +0.3
1,061,056 + CA264_04585 0.74 +0.2
1,061,057 - CA264_04585 0.74 -1.3
1,061,065 + CA264_04585 0.75 -0.2
1,061,065 + CA264_04585 0.75 -0.8
1,061,065 + CA264_04585 0.75 -0.7
1,061,065 + CA264_04585 0.75 -1.9
1,061,066 - CA264_04585 0.75 -0.1
1,061,066 - CA264_04585 0.75 +1.6
1,061,066 - CA264_04585 0.75 -1.7
1,061,067 + CA264_04585 0.75 -0.5
1,061,067 + CA264_04585 0.75 -1.1
1,061,092 + CA264_04585 0.77 -0.3
1,061,094 + CA264_04585 0.77 -0.2
1,061,094 + CA264_04585 0.77 +1.8
1,061,098 + CA264_04585 0.78 -2.1
1,061,099 - CA264_04585 0.78 +1.2
1,061,099 - CA264_04585 0.78 +0.1
1,061,099 - CA264_04585 0.78 -0.8
1,061,113 - CA264_04585 0.79 +0.1
1,061,113 - CA264_04585 0.79 -0.1
1,061,165 - CA264_04585 0.84 +0.2
1,061,184 - CA264_04585 0.86 -1.3
1,061,204 - CA264_04585 0.88 -0.2
1,061,206 + CA264_04585 0.88 -0.5
1,061,206 + CA264_04585 0.88 +1.5
1,061,207 - CA264_04585 0.88 -2.1
1,061,226 + CA264_04585 0.90 +0.2
1,061,232 - -1.7
1,061,232 - +0.4
1,061,232 - -1.0
1,061,234 - +0.0
1,061,234 - +0.6
1,061,287 - -0.1
1,061,289 + -1.7
1,061,290 - -0.3
1,061,309 + -1.0
1,061,310 - -0.9
1,061,310 - -0.7
1,061,318 - -0.6
1,061,379 - +0.4
1,061,384 + -0.2
1,061,384 + -0.4
1,061,384 + +0.9
1,061,384 + +0.2
1,061,385 - +0.6
1,061,388 + -2.7
1,061,388 + +0.3
1,061,389 - -0.2
1,061,389 - -1.0
1,061,389 - -0.3
1,061,413 + +0.9
1,061,421 + -0.5
1,061,426 + -0.5
1,061,426 + -0.3
1,061,427 - -0.3
1,061,427 - -1.2
1,061,427 - -0.1
1,061,522 + CA264_04590 0.13 -0.1
1,061,552 - CA264_04590 0.16 -0.1
1,061,594 + CA264_04590 0.19 -0.7
1,061,637 + CA264_04590 0.22 +0.3
1,061,638 - CA264_04590 0.22 -0.5
1,061,638 - CA264_04590 0.22 -0.4
1,061,705 + CA264_04590 0.27 +1.5
1,061,707 + CA264_04590 0.27 +0.0
1,061,708 - CA264_04590 0.27 -0.7
1,061,708 - CA264_04590 0.27 -0.4
1,061,708 - CA264_04590 0.27 -1.9
1,061,724 + CA264_04590 0.28 +0.3
1,061,725 - CA264_04590 0.29 -1.1
1,061,726 + CA264_04590 0.29 +0.0
1,061,727 - CA264_04590 0.29 -1.7
1,061,727 - CA264_04590 0.29 +0.7
1,061,740 + CA264_04590 0.30 +0.8
1,061,750 - CA264_04590 0.30 +0.9
1,061,807 + CA264_04590 0.35 +0.6
1,061,807 + CA264_04590 0.35 -1.1
1,061,808 - CA264_04590 0.35 -0.1
1,061,808 - CA264_04590 0.35 -1.4
1,061,821 + CA264_04590 0.36 -0.7
1,061,821 + CA264_04590 0.36 -0.7
1,061,822 - CA264_04590 0.36 +0.9
1,061,829 + CA264_04590 0.36 +0.9
1,061,864 + CA264_04590 0.39 +0.1
1,061,870 - CA264_04590 0.39 +0.3
1,061,870 - CA264_04590 0.39 -0.0
1,061,877 - CA264_04590 0.40 -0.1
1,061,911 - CA264_04590 0.42 -0.2
1,061,936 + CA264_04590 0.44 +0.3
1,061,936 + CA264_04590 0.44 +1.7
1,061,936 + CA264_04590 0.44 -1.4
1,061,936 + CA264_04590 0.44 +0.5
1,061,937 - CA264_04590 0.44 -0.1
1,061,940 - CA264_04590 0.45 -1.4
1,061,940 - CA264_04590 0.45 -1.6
1,061,968 + CA264_04590 0.47 +0.1
1,061,968 + CA264_04590 0.47 +1.4
1,061,969 - CA264_04590 0.47 +0.7
1,061,969 - CA264_04590 0.47 -0.1
1,061,978 + CA264_04590 0.48 +0.3
1,061,978 + CA264_04590 0.48 -0.2
1,061,978 + CA264_04590 0.48 -0.7
1,061,978 + CA264_04590 0.48 -0.2
1,061,979 - CA264_04590 0.48 -0.6
1,061,979 - CA264_04590 0.48 -0.7
1,061,988 - CA264_04590 0.48 -1.7
1,061,998 + CA264_04590 0.49 -0.1
1,062,004 + CA264_04590 0.49 +1.9
1,062,033 + CA264_04590 0.52 +0.3
1,062,034 - CA264_04590 0.52 -0.1
1,062,039 + CA264_04590 0.52 -0.2
1,062,043 + CA264_04590 0.52 +0.3
1,062,043 + CA264_04590 0.52 +1.9
1,062,043 + CA264_04590 0.52 -0.3
1,062,044 - CA264_04590 0.52 -0.9
1,062,044 - CA264_04590 0.52 -0.8
1,062,047 - CA264_04590 0.53 -0.1
1,062,051 + CA264_04590 0.53 +1.1
1,062,074 - CA264_04590 0.55 +0.2
1,062,085 - CA264_04590 0.56 -2.8
1,062,122 + CA264_04590 0.58 +0.4
1,062,123 - CA264_04590 0.58 -0.6
1,062,123 - CA264_04590 0.58 -0.7
1,062,125 - CA264_04590 0.59 -1.4
1,062,125 - CA264_04590 0.59 -0.7
1,062,125 - CA264_04590 0.59 -0.3
1,062,135 + CA264_04590 0.59 -0.1
1,062,136 - CA264_04590 0.59 -1.8
1,062,223 + CA264_04590 0.66 -0.2
1,062,224 - CA264_04590 0.66 +1.9
1,062,224 - CA264_04590 0.66 -1.1
1,062,237 - CA264_04590 0.67 -0.1
1,062,254 + CA264_04590 0.68 +0.2
1,062,255 - CA264_04590 0.68 -0.1
1,062,257 + CA264_04590 0.68 +1.2
1,062,258 - CA264_04590 0.69 +1.5
1,062,299 - CA264_04590 0.72 -1.2
1,062,301 - CA264_04590 0.72 +0.3
1,062,319 - CA264_04590 0.73 -0.7
1,062,319 - CA264_04590 0.73 -1.1
1,062,329 - CA264_04590 0.74 +0.8
1,062,331 + CA264_04590 0.74 +0.3
1,062,331 + CA264_04590 0.74 +0.3
1,062,335 + CA264_04590 0.74 +0.5

Or see this region's nucleotide sequence