Experiment: m.b. Dimethyl Sulfoxide 10 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_01035 and CA264_01040 are separated by 283 nucleotides CA264_01040 and CA264_01045 are separated by 25 nucleotides
CA264_01035: CA264_01035 - hypothetical protein, at 228,935 to 230,023
_01035
CA264_01040: CA264_01040 - hypothetical protein, at 230,307 to 230,729
_01040
CA264_01045: CA264_01045 - hypothetical protein, at 230,755 to 231,579
_01045
Position (kb) 230
231 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 229.952 kb on + strand at 229.953 kb on - strand at 229.969 kb on + strand at 229.975 kb on + strand at 230.021 kb on + strand at 230.022 kb on - strand at 230.029 kb on - strand at 230.030 kb on + strand at 230.031 kb on - strand at 230.040 kb on + strand at 230.041 kb on - strand at 230.060 kb on + strand at 230.061 kb on - strand at 230.086 kb on + strand at 230.086 kb on + strand at 230.087 kb on - strand at 230.217 kb on - strand at 230.217 kb on - strand at 230.236 kb on + strand at 230.242 kb on - strand at 230.242 kb on - strand at 230.242 kb on - strand at 230.243 kb on + strand at 230.244 kb on - strand at 230.244 kb on - strand at 230.244 kb on - strand at 230.244 kb on - strand at 230.245 kb on + strand at 230.246 kb on - strand at 230.247 kb on + strand at 230.247 kb on + strand at 230.247 kb on + strand at 230.247 kb on + strand at 230.247 kb on + strand at 230.247 kb on + strand at 230.248 kb on - strand at 230.248 kb on - strand at 230.248 kb on - strand at 230.261 kb on + strand at 230.261 kb on + strand at 230.262 kb on - strand at 230.276 kb on + strand at 230.276 kb on + strand at 230.299 kb on + strand at 230.603 kb on + strand, within CA264_01040 at 230.621 kb on - strand, within CA264_01040 at 230.635 kb on - strand, within CA264_01040 at 230.635 kb on - strand, within CA264_01040 at 230.702 kb on - strand at 230.723 kb on - strand at 230.728 kb on - strand at 230.728 kb on - strand at 230.742 kb on - strand at 230.761 kb on + strand at 230.761 kb on + strand at 230.761 kb on + strand at 230.987 kb on - strand, within CA264_01045 at 230.987 kb on - strand, within CA264_01045 at 230.996 kb on + strand, within CA264_01045 at 231.018 kb on - strand, within CA264_01045 at 231.018 kb on - strand, within CA264_01045 at 231.042 kb on - strand, within CA264_01045 at 231.047 kb on + strand, within CA264_01045 at 231.048 kb on - strand, within CA264_01045 at 231.132 kb on - strand, within CA264_01045 at 231.132 kb on - strand, within CA264_01045 at 231.189 kb on + strand, within CA264_01045 at 231.190 kb on - strand, within CA264_01045 at 231.241 kb on + strand, within CA264_01045 at 231.242 kb on - strand, within CA264_01045 at 231.289 kb on + strand, within CA264_01045 at 231.290 kb on - strand, within CA264_01045 at 231.371 kb on + strand, within CA264_01045 at 231.371 kb on + strand, within CA264_01045 at 231.375 kb on + strand, within CA264_01045 at 231.376 kb on - strand, within CA264_01045 at 231.376 kb on - strand, within CA264_01045 at 231.378 kb on - strand, within CA264_01045 at 231.393 kb on + strand, within CA264_01045 at 231.400 kb on + strand, within CA264_01045 at 231.400 kb on + strand, within CA264_01045 at 231.423 kb on - strand, within CA264_01045 at 231.433 kb on + strand, within CA264_01045 at 231.434 kb on - strand, within CA264_01045 at 231.468 kb on + strand, within CA264_01045 at 231.469 kb on - strand, within CA264_01045 at 231.499 kb on + strand at 231.499 kb on + strand at 231.500 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 10 vol% remove 229,952 + -0.1 229,953 - +0.7 229,969 + -1.1 229,975 + +0.4 230,021 + -0.1 230,022 - +0.2 230,029 - +0.1 230,030 + -0.1 230,031 - +1.6 230,040 + +1.0 230,041 - -1.4 230,060 + -0.4 230,061 - +1.5 230,086 + +0.2 230,086 + -0.8 230,087 - +0.2 230,217 - -0.8 230,217 - -1.3 230,236 + +0.4 230,242 - +0.4 230,242 - +1.4 230,242 - +0.0 230,243 + +0.2 230,244 - -0.6 230,244 - -1.0 230,244 - -1.2 230,244 - +0.0 230,245 + -0.6 230,246 - +0.4 230,247 + +0.8 230,247 + -0.1 230,247 + -1.1 230,247 + -0.1 230,247 + +2.0 230,247 + -0.4 230,248 - +0.2 230,248 - -0.6 230,248 - +1.0 230,261 + +3.0 230,261 + -0.4 230,262 - +0.4 230,276 + -0.5 230,276 + -0.6 230,299 + +0.1 230,603 + CA264_01040 0.70 +0.0 230,621 - CA264_01040 0.74 -0.3 230,635 - CA264_01040 0.78 -0.4 230,635 - CA264_01040 0.78 -2.8 230,702 - -0.1 230,723 - +0.0 230,728 - +0.0 230,728 - +0.0 230,742 - -1.0 230,761 + +0.0 230,761 + -0.7 230,761 + -0.6 230,987 - CA264_01045 0.28 +0.1 230,987 - CA264_01045 0.28 -1.5 230,996 + CA264_01045 0.29 +0.0 231,018 - CA264_01045 0.32 +0.6 231,018 - CA264_01045 0.32 -0.6 231,042 - CA264_01045 0.35 +0.5 231,047 + CA264_01045 0.35 +1.0 231,048 - CA264_01045 0.36 -0.5 231,132 - CA264_01045 0.46 +0.0 231,132 - CA264_01045 0.46 -2.0 231,189 + CA264_01045 0.53 +0.5 231,190 - CA264_01045 0.53 -1.0 231,241 + CA264_01045 0.59 -0.4 231,242 - CA264_01045 0.59 -0.5 231,289 + CA264_01045 0.65 +1.3 231,290 - CA264_01045 0.65 -0.3 231,371 + CA264_01045 0.75 +0.1 231,371 + CA264_01045 0.75 -0.2 231,375 + CA264_01045 0.75 +3.0 231,376 - CA264_01045 0.75 +0.5 231,376 - CA264_01045 0.75 +0.0 231,378 - CA264_01045 0.76 -2.3 231,393 + CA264_01045 0.77 -0.9 231,400 + CA264_01045 0.78 -0.8 231,400 + CA264_01045 0.78 +0.1 231,423 - CA264_01045 0.81 +0.0 231,433 + CA264_01045 0.82 +1.5 231,434 - CA264_01045 0.82 -1.0 231,468 + CA264_01045 0.86 -0.2 231,469 - CA264_01045 0.87 -0.5 231,499 + +0.0 231,499 + -1.5 231,500 - +0.7
Or see this region's nucleotide sequence