Experiment: m.b. Dimethyl Sulfoxide 10 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_00650 and CA264_00655 are separated by 107 nucleotides CA264_00655 and CA264_00660 are separated by 300 nucleotides
CA264_00650: CA264_00650 - permease, at 143,087 to 144,163
_00650
CA264_00655: CA264_00655 - tRNA-guanine(34) transglycosylase, at 144,271 to 145,401
_00655
CA264_00660: CA264_00660 - hypothetical protein, at 145,702 to 146,778
_00660
Position (kb)
144
145
146 Strain fitness (log2 ratio)
-2
-1
0
1 at 144.171 kb on - strand at 144.175 kb on - strand at 144.216 kb on - strand at 144.269 kb on - strand at 144.272 kb on + strand at 144.355 kb on + strand at 144.381 kb on + strand at 144.440 kb on + strand, within CA264_00655 at 144.451 kb on - strand, within CA264_00655 at 144.451 kb on - strand, within CA264_00655 at 144.452 kb on + strand, within CA264_00655 at 144.453 kb on - strand, within CA264_00655 at 144.467 kb on + strand, within CA264_00655 at 144.531 kb on + strand, within CA264_00655 at 144.597 kb on + strand, within CA264_00655 at 144.598 kb on - strand, within CA264_00655 at 144.657 kb on - strand, within CA264_00655 at 144.707 kb on + strand, within CA264_00655 at 144.707 kb on + strand, within CA264_00655 at 144.708 kb on - strand, within CA264_00655 at 144.809 kb on + strand, within CA264_00655 at 144.810 kb on - strand, within CA264_00655 at 144.810 kb on - strand, within CA264_00655 at 144.854 kb on + strand, within CA264_00655 at 144.854 kb on + strand, within CA264_00655 at 144.919 kb on - strand, within CA264_00655 at 145.038 kb on + strand, within CA264_00655 at 145.109 kb on - strand, within CA264_00655 at 145.109 kb on - strand, within CA264_00655 at 145.135 kb on + strand, within CA264_00655 at 145.136 kb on - strand, within CA264_00655 at 145.136 kb on - strand, within CA264_00655 at 145.208 kb on + strand, within CA264_00655 at 145.209 kb on - strand, within CA264_00655 at 145.210 kb on + strand, within CA264_00655 at 145.210 kb on + strand, within CA264_00655 at 145.211 kb on - strand, within CA264_00655 at 145.218 kb on - strand, within CA264_00655 at 145.308 kb on + strand at 145.407 kb on + strand at 145.408 kb on - strand at 145.470 kb on + strand at 145.471 kb on - strand at 145.511 kb on - strand at 145.511 kb on - strand at 145.517 kb on + strand at 145.572 kb on + strand at 145.573 kb on - strand at 145.575 kb on - strand at 145.575 kb on - strand at 145.583 kb on + strand at 145.638 kb on - strand at 145.638 kb on - strand at 145.673 kb on - strand at 145.673 kb on - strand at 145.687 kb on - strand at 145.687 kb on - strand at 145.728 kb on - strand at 145.728 kb on - strand at 145.729 kb on + strand at 145.730 kb on - strand at 145.931 kb on - strand, within CA264_00660 at 145.931 kb on - strand, within CA264_00660 at 145.931 kb on - strand, within CA264_00660 at 145.931 kb on - strand, within CA264_00660 at 145.937 kb on - strand, within CA264_00660 at 145.937 kb on - strand, within CA264_00660 at 145.937 kb on - strand, within CA264_00660 at 146.123 kb on - strand, within CA264_00660 at 146.258 kb on - strand, within CA264_00660 at 146.285 kb on - strand, within CA264_00660 at 146.285 kb on - strand, within CA264_00660 at 146.285 kb on - strand, within CA264_00660 at 146.337 kb on - strand, within CA264_00660 at 146.383 kb on - strand, within CA264_00660 at 146.383 kb on - strand, within CA264_00660 at 146.392 kb on - strand, within CA264_00660 at 146.395 kb on - strand, within CA264_00660 at 146.395 kb on - strand, within CA264_00660 at 146.395 kb on - strand, within CA264_00660
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 10 vol% remove 144,171 - +0.2 144,175 - +0.4 144,216 - -0.3 144,269 - +0.5 144,272 + -1.5 144,355 + -0.2 144,381 + -0.5 144,440 + CA264_00655 0.15 -1.7 144,451 - CA264_00655 0.16 -1.3 144,451 - CA264_00655 0.16 +0.5 144,452 + CA264_00655 0.16 -0.5 144,453 - CA264_00655 0.16 -0.7 144,467 + CA264_00655 0.17 -2.3 144,531 + CA264_00655 0.23 -1.5 144,597 + CA264_00655 0.29 -0.3 144,598 - CA264_00655 0.29 -0.2 144,657 - CA264_00655 0.34 -0.5 144,707 + CA264_00655 0.39 -0.7 144,707 + CA264_00655 0.39 -0.9 144,708 - CA264_00655 0.39 -0.8 144,809 + CA264_00655 0.48 -0.5 144,810 - CA264_00655 0.48 -0.5 144,810 - CA264_00655 0.48 +1.0 144,854 + CA264_00655 0.52 -0.9 144,854 + CA264_00655 0.52 -0.4 144,919 - CA264_00655 0.57 -0.5 145,038 + CA264_00655 0.68 +0.0 145,109 - CA264_00655 0.74 -2.0 145,109 - CA264_00655 0.74 +0.0 145,135 + CA264_00655 0.76 -2.1 145,136 - CA264_00655 0.76 +1.0 145,136 - CA264_00655 0.76 +0.9 145,208 + CA264_00655 0.83 -1.4 145,209 - CA264_00655 0.83 -2.0 145,210 + CA264_00655 0.83 -1.1 145,210 + CA264_00655 0.83 +0.0 145,211 - CA264_00655 0.83 -2.1 145,218 - CA264_00655 0.84 -0.4 145,308 + -0.4 145,407 + -0.7 145,408 - -1.8 145,470 + -2.0 145,471 - +0.6 145,511 - +1.0 145,511 - -1.5 145,517 + -0.5 145,572 + +1.0 145,573 - +0.4 145,575 - +0.7 145,575 - +0.2 145,583 + +0.4 145,638 - +1.0 145,638 - +0.5 145,673 - -0.4 145,673 - -0.5 145,687 - -0.8 145,687 - -2.1 145,728 - -0.4 145,728 - -1.0 145,729 + +0.6 145,730 - -0.5 145,931 - CA264_00660 0.21 -0.8 145,931 - CA264_00660 0.21 -1.0 145,931 - CA264_00660 0.21 -0.1 145,931 - CA264_00660 0.21 -2.4 145,937 - CA264_00660 0.22 -0.3 145,937 - CA264_00660 0.22 -1.1 145,937 - CA264_00660 0.22 -0.9 146,123 - CA264_00660 0.39 -0.6 146,258 - CA264_00660 0.52 -1.0 146,285 - CA264_00660 0.54 -0.7 146,285 - CA264_00660 0.54 +0.3 146,285 - CA264_00660 0.54 -0.8 146,337 - CA264_00660 0.59 -1.5 146,383 - CA264_00660 0.63 -1.0 146,383 - CA264_00660 0.63 -1.7 146,392 - CA264_00660 0.64 +1.0 146,395 - CA264_00660 0.64 -1.4 146,395 - CA264_00660 0.64 -0.6 146,395 - CA264_00660 0.64 -1.9
Or see this region's nucleotide sequence