Experiment: m.b. Dimethyl Sulfoxide 10 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_00235 and CA264_00240 overlap by 37 nucleotides CA264_00240 and CA264_00245 overlap by 4 nucleotides CA264_00245 and CA264_00250 are separated by 139 nucleotides
CA264_00235: CA264_00235 - hypothetical protein, at 57,795 to 58,112
_00235
CA264_00240: CA264_00240 - hypothetical protein, at 58,076 to 58,672
_00240
CA264_00245: CA264_00245 - hypothetical protein, at 58,669 to 59,571
_00245
CA264_00250: CA264_00250 - hypothetical protein, at 59,711 to 62,431
_00250
Position (kb)
58
59
60 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 57.669 kb on - strand at 57.669 kb on - strand at 57.669 kb on - strand at 57.669 kb on - strand at 57.669 kb on - strand at 57.672 kb on + strand at 57.673 kb on - strand at 57.678 kb on + strand at 57.702 kb on - strand at 57.703 kb on + strand at 57.704 kb on - strand at 57.739 kb on + strand at 57.740 kb on - strand at 57.740 kb on - strand at 57.740 kb on - strand at 57.744 kb on + strand at 57.744 kb on + strand at 57.745 kb on - strand at 57.745 kb on - strand at 57.800 kb on + strand at 57.801 kb on - strand at 57.802 kb on + strand at 57.803 kb on - strand at 57.803 kb on - strand at 57.818 kb on + strand at 57.819 kb on - strand at 57.930 kb on - strand, within CA264_00235 at 57.986 kb on + strand, within CA264_00235 at 57.987 kb on - strand, within CA264_00235 at 57.987 kb on - strand, within CA264_00235 at 58.029 kb on + strand, within CA264_00235 at 58.029 kb on + strand, within CA264_00235 at 58.030 kb on - strand, within CA264_00235 at 58.030 kb on - strand, within CA264_00235 at 58.064 kb on - strand, within CA264_00235 at 58.099 kb on - strand at 58.264 kb on + strand, within CA264_00240 at 58.321 kb on - strand, within CA264_00240 at 58.365 kb on - strand, within CA264_00240 at 58.485 kb on + strand, within CA264_00240 at 58.493 kb on + strand, within CA264_00240 at 58.522 kb on - strand, within CA264_00240 at 58.588 kb on + strand, within CA264_00240 at 58.635 kb on + strand at 58.663 kb on + strand at 58.664 kb on - strand at 58.782 kb on + strand, within CA264_00245 at 58.971 kb on + strand, within CA264_00245 at 59.002 kb on + strand, within CA264_00245 at 59.002 kb on + strand, within CA264_00245 at 59.134 kb on - strand, within CA264_00245 at 59.226 kb on + strand, within CA264_00245 at 59.313 kb on - strand, within CA264_00245 at 59.447 kb on + strand, within CA264_00245 at 59.448 kb on - strand, within CA264_00245 at 59.513 kb on + strand at 59.513 kb on + strand at 59.513 kb on + strand at 59.548 kb on + strand at 59.560 kb on + strand at 59.561 kb on - strand at 59.561 kb on - strand at 59.585 kb on - strand at 59.600 kb on - strand at 59.600 kb on - strand at 59.601 kb on + strand at 59.684 kb on + strand at 59.728 kb on - strand at 59.728 kb on - strand at 59.749 kb on + strand at 59.751 kb on + strand at 59.752 kb on - strand at 59.769 kb on - strand at 59.772 kb on - strand at 59.772 kb on - strand at 59.808 kb on + strand at 59.809 kb on - strand at 59.815 kb on - strand at 59.958 kb on - strand at 59.970 kb on + strand at 59.970 kb on + strand at 59.970 kb on + strand at 59.970 kb on + strand at 59.971 kb on - strand at 59.971 kb on - strand at 59.971 kb on - strand at 59.971 kb on - strand at 59.971 kb on - strand at 59.971 kb on - strand at 60.018 kb on + strand, within CA264_00250 at 60.019 kb on - strand, within CA264_00250 at 60.022 kb on + strand, within CA264_00250 at 60.022 kb on + strand, within CA264_00250 at 60.022 kb on + strand, within CA264_00250 at 60.022 kb on + strand, within CA264_00250 at 60.023 kb on - strand, within CA264_00250 at 60.068 kb on + strand, within CA264_00250 at 60.068 kb on + strand, within CA264_00250 at 60.068 kb on + strand, within CA264_00250 at 60.222 kb on - strand, within CA264_00250 at 60.227 kb on - strand, within CA264_00250 at 60.227 kb on - strand, within CA264_00250 at 60.236 kb on - strand, within CA264_00250 at 60.293 kb on - strand, within CA264_00250 at 60.341 kb on + strand, within CA264_00250 at 60.362 kb on + strand, within CA264_00250 at 60.363 kb on - strand, within CA264_00250 at 60.383 kb on + strand, within CA264_00250 at 60.384 kb on - strand, within CA264_00250
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 10 vol% remove 57,669 - +0.2 57,669 - -0.3 57,669 - -0.1 57,669 - -0.2 57,669 - -1.0 57,672 + +0.0 57,673 - -0.2 57,678 + -0.0 57,702 - +0.2 57,703 + +0.9 57,704 - +0.2 57,739 + -0.5 57,740 - -1.2 57,740 - +1.2 57,740 - -0.4 57,744 + -1.8 57,744 + +0.9 57,745 - +0.9 57,745 - -0.1 57,800 + +1.0 57,801 - -0.1 57,802 + -1.0 57,803 - +1.0 57,803 - -0.2 57,818 + -0.8 57,819 - +0.7 57,930 - CA264_00235 0.42 -1.4 57,986 + CA264_00235 0.60 +0.3 57,987 - CA264_00235 0.60 -0.4 57,987 - CA264_00235 0.60 +0.8 58,029 + CA264_00235 0.74 -0.5 58,029 + CA264_00235 0.74 +0.8 58,030 - CA264_00235 0.74 +1.0 58,030 - CA264_00235 0.74 -0.0 58,064 - CA264_00235 0.85 +1.4 58,099 - -1.4 58,264 + CA264_00240 0.31 +1.0 58,321 - CA264_00240 0.41 -0.1 58,365 - CA264_00240 0.48 -1.2 58,485 + CA264_00240 0.69 -0.7 58,493 + CA264_00240 0.70 -0.2 58,522 - CA264_00240 0.75 +0.0 58,588 + CA264_00240 0.86 -0.0 58,635 + +0.7 58,663 + +0.2 58,664 - +0.0 58,782 + CA264_00245 0.13 -2.2 58,971 + CA264_00245 0.33 -1.0 59,002 + CA264_00245 0.37 +0.3 59,002 + CA264_00245 0.37 -0.3 59,134 - CA264_00245 0.51 -0.3 59,226 + CA264_00245 0.62 -0.4 59,313 - CA264_00245 0.71 -1.0 59,447 + CA264_00245 0.86 +0.0 59,448 - CA264_00245 0.86 -0.4 59,513 + -1.8 59,513 + +0.2 59,513 + +0.4 59,548 + +0.5 59,560 + +1.3 59,561 - -0.4 59,561 - -0.3 59,585 - -0.2 59,600 - +0.0 59,600 - -2.1 59,601 + +1.9 59,684 + +0.0 59,728 - -0.6 59,728 - +0.9 59,749 + +1.2 59,751 + +0.5 59,752 - -0.7 59,769 - -0.5 59,772 - -0.2 59,772 - +0.5 59,808 + -0.4 59,809 - -0.7 59,815 - -0.5 59,958 - -0.2 59,970 + +1.6 59,970 + -0.0 59,970 + -0.5 59,970 + -0.1 59,971 - +0.5 59,971 - -0.3 59,971 - -2.1 59,971 - +0.3 59,971 - -0.5 59,971 - +1.5 60,018 + CA264_00250 0.11 -0.6 60,019 - CA264_00250 0.11 -0.2 60,022 + CA264_00250 0.11 +0.4 60,022 + CA264_00250 0.11 +0.0 60,022 + CA264_00250 0.11 +1.0 60,022 + CA264_00250 0.11 -0.5 60,023 - CA264_00250 0.11 +0.0 60,068 + CA264_00250 0.13 -0.1 60,068 + CA264_00250 0.13 -1.0 60,068 + CA264_00250 0.13 -0.1 60,222 - CA264_00250 0.19 -2.8 60,227 - CA264_00250 0.19 -0.3 60,227 - CA264_00250 0.19 -0.5 60,236 - CA264_00250 0.19 -0.3 60,293 - CA264_00250 0.21 -0.3 60,341 + CA264_00250 0.23 -0.2 60,362 + CA264_00250 0.24 -0.1 60,363 - CA264_00250 0.24 -0.5 60,383 + CA264_00250 0.25 +0.5 60,384 - CA264_00250 0.25 +1.2
Or see this region's nucleotide sequence