Experiment: m.b. Dimethyl Sulfoxide 7.5 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_21560 and CA264_21565 are separated by 103 nucleotides CA264_21565 and CA264_21570 are separated by 109 nucleotides CA264_21570 and CA264_21575 are separated by 68 nucleotides CA264_21575 and CA264_21580 are separated by 134 nucleotides
CA264_21560: CA264_21560 - copper-translocating P-type ATPase, at 179,123 to 181,267
_21560
CA264_21565: CA264_21565 - hypothetical protein, at 181,371 to 181,721
_21565
CA264_21570: CA264_21570 - hypothetical protein, at 181,831 to 182,100
_21570
CA264_21575: CA264_21575 - (2Fe-2S)-binding protein, at 182,169 to 183,701
_21575
CA264_21580: CA264_21580 - hypothetical protein, at 183,836 to 184,834
_21580
Position (kb) 182
183
184 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 181.204 kb on - strand at 181.234 kb on + strand at 181.261 kb on + strand at 181.265 kb on + strand at 181.266 kb on - strand at 181.269 kb on - strand at 181.271 kb on + strand at 181.272 kb on - strand at 181.272 kb on - strand at 181.272 kb on - strand at 181.281 kb on + strand at 181.281 kb on + strand at 181.282 kb on - strand at 181.287 kb on - strand at 181.296 kb on + strand at 181.297 kb on - strand at 181.298 kb on + strand at 181.298 kb on + strand at 181.299 kb on - strand at 181.315 kb on - strand at 181.329 kb on - strand at 181.344 kb on + strand at 181.345 kb on - strand at 181.345 kb on - strand at 181.346 kb on + strand at 181.346 kb on + strand at 181.346 kb on + strand at 181.347 kb on - strand at 181.414 kb on + strand, within CA264_21565 at 181.414 kb on + strand, within CA264_21565 at 181.414 kb on + strand, within CA264_21565 at 181.415 kb on - strand, within CA264_21565 at 181.418 kb on - strand, within CA264_21565 at 181.418 kb on - strand, within CA264_21565 at 181.484 kb on + strand, within CA264_21565 at 181.505 kb on + strand, within CA264_21565 at 181.506 kb on - strand, within CA264_21565 at 181.534 kb on + strand, within CA264_21565 at 181.534 kb on + strand, within CA264_21565 at 181.534 kb on + strand, within CA264_21565 at 181.534 kb on + strand, within CA264_21565 at 181.538 kb on + strand, within CA264_21565 at 181.539 kb on - strand, within CA264_21565 at 181.539 kb on - strand, within CA264_21565 at 181.543 kb on + strand, within CA264_21565 at 181.543 kb on + strand, within CA264_21565 at 181.543 kb on + strand, within CA264_21565 at 181.544 kb on - strand, within CA264_21565 at 181.588 kb on + strand, within CA264_21565 at 181.591 kb on + strand, within CA264_21565 at 181.777 kb on - strand at 181.787 kb on + strand at 181.788 kb on - strand at 181.808 kb on - strand at 181.818 kb on + strand at 181.819 kb on - strand at 181.821 kb on + strand at 181.841 kb on + strand at 181.841 kb on + strand at 181.842 kb on - strand at 181.842 kb on - strand at 181.846 kb on - strand at 181.846 kb on - strand at 181.846 kb on - strand at 181.865 kb on + strand, within CA264_21570 at 181.865 kb on + strand, within CA264_21570 at 181.866 kb on - strand, within CA264_21570 at 181.866 kb on - strand, within CA264_21570 at 181.870 kb on + strand, within CA264_21570 at 181.931 kb on + strand, within CA264_21570 at 181.931 kb on + strand, within CA264_21570 at 181.932 kb on - strand, within CA264_21570 at 182.004 kb on + strand, within CA264_21570 at 182.039 kb on - strand, within CA264_21570 at 182.105 kb on - strand at 182.139 kb on + strand at 182.144 kb on - strand at 182.147 kb on + strand at 182.148 kb on - strand at 182.163 kb on + strand at 182.164 kb on - strand at 182.189 kb on + strand at 182.192 kb on - strand at 182.248 kb on - strand at 182.394 kb on + strand, within CA264_21575 at 182.420 kb on + strand, within CA264_21575 at 182.420 kb on + strand, within CA264_21575 at 182.420 kb on + strand, within CA264_21575 at 182.421 kb on - strand, within CA264_21575 at 182.426 kb on - strand, within CA264_21575 at 182.432 kb on + strand, within CA264_21575 at 182.487 kb on - strand, within CA264_21575 at 182.487 kb on - strand, within CA264_21575 at 182.494 kb on + strand, within CA264_21575 at 182.495 kb on - strand, within CA264_21575 at 182.550 kb on + strand, within CA264_21575 at 182.608 kb on + strand, within CA264_21575 at 182.609 kb on - strand, within CA264_21575 at 182.660 kb on + strand, within CA264_21575 at 182.716 kb on - strand, within CA264_21575 at 182.788 kb on + strand, within CA264_21575 at 182.808 kb on - strand, within CA264_21575 at 182.833 kb on + strand, within CA264_21575 at 182.834 kb on - strand, within CA264_21575 at 182.858 kb on + strand, within CA264_21575 at 182.880 kb on + strand, within CA264_21575 at 182.964 kb on + strand, within CA264_21575 at 182.964 kb on + strand, within CA264_21575 at 182.965 kb on - strand, within CA264_21575 at 182.975 kb on - strand at 182.992 kb on - strand, within CA264_21575 at 183.074 kb on + strand, within CA264_21575 at 183.075 kb on - strand, within CA264_21575 at 183.105 kb on + strand, within CA264_21575 at 183.106 kb on - strand, within CA264_21575 at 183.142 kb on - strand, within CA264_21575 at 183.178 kb on + strand, within CA264_21575 at 183.178 kb on + strand, within CA264_21575 at 183.179 kb on - strand, within CA264_21575 at 183.219 kb on + strand, within CA264_21575 at 183.219 kb on + strand, within CA264_21575 at 183.220 kb on - strand, within CA264_21575 at 183.278 kb on + strand, within CA264_21575 at 183.292 kb on + strand, within CA264_21575 at 183.389 kb on - strand, within CA264_21575 at 183.412 kb on - strand, within CA264_21575 at 183.419 kb on - strand, within CA264_21575 at 183.450 kb on - strand, within CA264_21575 at 183.464 kb on + strand, within CA264_21575 at 183.465 kb on - strand, within CA264_21575 at 183.465 kb on - strand, within CA264_21575 at 183.551 kb on + strand at 183.552 kb on - strand at 183.562 kb on + strand at 183.563 kb on - strand at 183.822 kb on + strand at 183.822 kb on + strand at 183.826 kb on - strand at 183.826 kb on - strand at 183.826 kb on - strand at 183.845 kb on + strand at 183.865 kb on + strand at 183.882 kb on + strand at 183.946 kb on + strand, within CA264_21580 at 183.946 kb on + strand, within CA264_21580 at 183.946 kb on + strand, within CA264_21580 at 183.946 kb on + strand, within CA264_21580 at 183.967 kb on + strand, within CA264_21580 at 183.968 kb on - strand, within CA264_21580 at 184.090 kb on - strand, within CA264_21580 at 184.107 kb on + strand, within CA264_21580 at 184.136 kb on + strand, within CA264_21580 at 184.136 kb on + strand, within CA264_21580 at 184.137 kb on - strand, within CA264_21580 at 184.262 kb on + strand, within CA264_21580 at 184.262 kb on + strand, within CA264_21580 at 184.262 kb on + strand, within CA264_21580 at 184.262 kb on + strand, within CA264_21580 at 184.263 kb on - strand, within CA264_21580 at 184.263 kb on - strand, within CA264_21580 at 184.263 kb on - strand, within CA264_21580 at 184.263 kb on - strand, within CA264_21580 at 184.263 kb on - strand, within CA264_21580 at 184.280 kb on - strand, within CA264_21580 at 184.295 kb on + strand, within CA264_21580 at 184.322 kb on + strand, within CA264_21580 at 184.322 kb on + strand, within CA264_21580 at 184.324 kb on + strand, within CA264_21580 at 184.325 kb on - strand, within CA264_21580 at 184.386 kb on + strand, within CA264_21580 at 184.386 kb on + strand, within CA264_21580 at 184.386 kb on + strand, within CA264_21580 at 184.386 kb on + strand, within CA264_21580 at 184.414 kb on + strand, within CA264_21580 at 184.495 kb on + strand, within CA264_21580 at 184.495 kb on + strand, within CA264_21580 at 184.500 kb on + strand, within CA264_21580 at 184.500 kb on + strand, within CA264_21580 at 184.500 kb on + strand, within CA264_21580 at 184.500 kb on + strand, within CA264_21580 at 184.500 kb on + strand, within CA264_21580 at 184.501 kb on - strand, within CA264_21580 at 184.501 kb on - strand, within CA264_21580 at 184.501 kb on - strand, within CA264_21580 at 184.501 kb on - strand, within CA264_21580 at 184.501 kb on - strand, within CA264_21580 at 184.504 kb on + strand, within CA264_21580 at 184.504 kb on + strand, within CA264_21580 at 184.504 kb on + strand, within CA264_21580 at 184.505 kb on - strand, within CA264_21580 at 184.509 kb on + strand, within CA264_21580 at 184.585 kb on + strand, within CA264_21580 at 184.586 kb on - strand, within CA264_21580
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 7.5 vol% remove 181,204 - -0.7 181,234 + -1.3 181,261 + +0.6 181,265 + +0.5 181,266 - -0.9 181,269 - +0.1 181,271 + -0.4 181,272 - +0.2 181,272 - -1.2 181,272 - +1.1 181,281 + +1.2 181,281 + +1.1 181,282 - +0.5 181,287 - +2.1 181,296 + +1.1 181,297 - +1.2 181,298 + -0.2 181,298 + -0.6 181,299 - +2.1 181,315 - +0.3 181,329 - -0.2 181,344 + -0.4 181,345 - +1.6 181,345 - -0.5 181,346 + -1.3 181,346 + +1.3 181,346 + +0.5 181,347 - +1.1 181,414 + CA264_21565 0.12 -0.9 181,414 + CA264_21565 0.12 +1.1 181,414 + CA264_21565 0.12 +2.1 181,415 - CA264_21565 0.13 +1.1 181,418 - CA264_21565 0.13 -0.5 181,418 - CA264_21565 0.13 +0.0 181,484 + CA264_21565 0.32 -1.1 181,505 + CA264_21565 0.38 -0.9 181,506 - CA264_21565 0.38 -0.9 181,534 + CA264_21565 0.46 -0.6 181,534 + CA264_21565 0.46 +0.5 181,534 + CA264_21565 0.46 -0.4 181,534 + CA264_21565 0.46 -0.5 181,538 + CA264_21565 0.48 -1.5 181,539 - CA264_21565 0.48 +3.2 181,539 - CA264_21565 0.48 +0.1 181,543 + CA264_21565 0.49 +0.1 181,543 + CA264_21565 0.49 +1.1 181,543 + CA264_21565 0.49 -0.9 181,544 - CA264_21565 0.49 +1.0 181,588 + CA264_21565 0.62 +1.5 181,591 + CA264_21565 0.63 -0.5 181,777 - -0.8 181,787 + -0.9 181,788 - +0.4 181,808 - -1.3 181,818 + -0.6 181,819 - -0.4 181,821 + -0.9 181,841 + -0.1 181,841 + -0.4 181,842 - -0.2 181,842 - -0.7 181,846 - -2.4 181,846 - -0.3 181,846 - -1.3 181,865 + CA264_21570 0.13 -1.5 181,865 + CA264_21570 0.13 -0.8 181,866 - CA264_21570 0.13 -1.4 181,866 - CA264_21570 0.13 +2.6 181,870 + CA264_21570 0.14 -0.9 181,931 + CA264_21570 0.37 -0.8 181,931 + CA264_21570 0.37 +0.6 181,932 - CA264_21570 0.37 -0.2 182,004 + CA264_21570 0.64 -0.4 182,039 - CA264_21570 0.77 -0.4 182,105 - +1.1 182,139 + -2.8 182,144 - +1.1 182,147 + +0.5 182,148 - +0.5 182,163 + +0.9 182,164 - -1.2 182,189 + -0.3 182,192 - +0.2 182,248 - +0.7 182,394 + CA264_21575 0.15 -0.4 182,420 + CA264_21575 0.16 +0.5 182,420 + CA264_21575 0.16 -0.5 182,420 + CA264_21575 0.16 -0.5 182,421 - CA264_21575 0.16 -1.3 182,426 - CA264_21575 0.17 +0.6 182,432 + CA264_21575 0.17 -0.5 182,487 - CA264_21575 0.21 -0.2 182,487 - CA264_21575 0.21 -1.5 182,494 + CA264_21575 0.21 -1.9 182,495 - CA264_21575 0.21 +0.5 182,550 + CA264_21575 0.25 +0.3 182,608 + CA264_21575 0.29 +1.1 182,609 - CA264_21575 0.29 -0.3 182,660 + CA264_21575 0.32 -0.7 182,716 - CA264_21575 0.36 +0.2 182,788 + CA264_21575 0.40 -0.2 182,808 - CA264_21575 0.42 -0.4 182,833 + CA264_21575 0.43 -1.8 182,834 - CA264_21575 0.43 +0.7 182,858 + CA264_21575 0.45 -0.8 182,880 + CA264_21575 0.46 +0.3 182,964 + CA264_21575 0.52 -0.6 182,964 + CA264_21575 0.52 -0.4 182,965 - CA264_21575 0.52 -2.1 182,975 - +0.1 182,992 - CA264_21575 0.54 -0.2 183,074 + CA264_21575 0.59 -0.6 183,075 - CA264_21575 0.59 -1.0 183,105 + CA264_21575 0.61 -1.1 183,106 - CA264_21575 0.61 +0.8 183,142 - CA264_21575 0.63 -1.3 183,178 + CA264_21575 0.66 +0.5 183,178 + CA264_21575 0.66 -0.4 183,179 - CA264_21575 0.66 -0.1 183,219 + CA264_21575 0.68 +0.8 183,219 + CA264_21575 0.68 -1.5 183,220 - CA264_21575 0.69 +0.5 183,278 + CA264_21575 0.72 +1.3 183,292 + CA264_21575 0.73 -1.2 183,389 - CA264_21575 0.80 -0.5 183,412 - CA264_21575 0.81 +0.2 183,419 - CA264_21575 0.82 -0.2 183,450 - CA264_21575 0.84 +1.4 183,464 + CA264_21575 0.84 -0.0 183,465 - CA264_21575 0.85 -0.7 183,465 - CA264_21575 0.85 +0.4 183,551 + +1.4 183,552 - +1.3 183,562 + +0.6 183,563 - +0.1 183,822 + -1.0 183,822 + -0.7 183,826 - +0.5 183,826 - -1.9 183,826 - +0.4 183,845 + +2.1 183,865 + -0.0 183,882 + +0.8 183,946 + CA264_21580 0.11 -0.2 183,946 + CA264_21580 0.11 +1.1 183,946 + CA264_21580 0.11 -0.4 183,946 + CA264_21580 0.11 -0.8 183,967 + CA264_21580 0.13 -0.5 183,968 - CA264_21580 0.13 +0.7 184,090 - CA264_21580 0.25 -0.6 184,107 + CA264_21580 0.27 -0.0 184,136 + CA264_21580 0.30 -0.2 184,136 + CA264_21580 0.30 +0.2 184,137 - CA264_21580 0.30 +0.1 184,262 + CA264_21580 0.43 -0.4 184,262 + CA264_21580 0.43 +0.2 184,262 + CA264_21580 0.43 -0.6 184,262 + CA264_21580 0.43 -0.4 184,263 - CA264_21580 0.43 -0.0 184,263 - CA264_21580 0.43 +0.1 184,263 - CA264_21580 0.43 +0.1 184,263 - CA264_21580 0.43 +0.1 184,263 - CA264_21580 0.43 +0.5 184,280 - CA264_21580 0.44 +0.1 184,295 + CA264_21580 0.46 +1.5 184,322 + CA264_21580 0.49 +0.5 184,322 + CA264_21580 0.49 +0.6 184,324 + CA264_21580 0.49 +0.3 184,325 - CA264_21580 0.49 -1.3 184,386 + CA264_21580 0.55 +0.2 184,386 + CA264_21580 0.55 -0.2 184,386 + CA264_21580 0.55 +0.4 184,386 + CA264_21580 0.55 +0.2 184,414 + CA264_21580 0.58 -0.2 184,495 + CA264_21580 0.66 +1.6 184,495 + CA264_21580 0.66 +0.0 184,500 + CA264_21580 0.66 -1.0 184,500 + CA264_21580 0.66 -0.3 184,500 + CA264_21580 0.66 -0.4 184,500 + CA264_21580 0.66 -0.5 184,500 + CA264_21580 0.66 -0.4 184,501 - CA264_21580 0.67 -0.5 184,501 - CA264_21580 0.67 -0.3 184,501 - CA264_21580 0.67 +0.1 184,501 - CA264_21580 0.67 -0.2 184,501 - CA264_21580 0.67 +0.3 184,504 + CA264_21580 0.67 -0.0 184,504 + CA264_21580 0.67 +0.4 184,504 + CA264_21580 0.67 -0.2 184,505 - CA264_21580 0.67 +0.5 184,509 + CA264_21580 0.67 -0.4 184,585 + CA264_21580 0.75 -0.5 184,586 - CA264_21580 0.75 +0.9
Or see this region's nucleotide sequence