Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_21325

Experiment: m.b. Dimethyl Sulfoxide 7.5 vol%

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_21320 and CA264_21325 are separated by 176 nucleotidesCA264_21325 and CA264_21330 are separated by 26 nucleotides CA264_21320: CA264_21320 - hypothetical protein, at 126,929 to 127,609 _21320 CA264_21325: CA264_21325 - copper-translocating P-type ATPase, at 127,786 to 130,023 _21325 CA264_21330: CA264_21330 - MBL fold metallo-hydrolase, at 130,050 to 131,405 _21330 Position (kb) 127 128 129 130 131Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 126.834 kb on + strandat 126.834 kb on + strandat 126.835 kb on - strandat 126.874 kb on - strandat 126.899 kb on + strandat 126.946 kb on + strandat 127.075 kb on + strand, within CA264_21320at 127.080 kb on + strand, within CA264_21320at 127.094 kb on - strand, within CA264_21320at 127.197 kb on + strand, within CA264_21320at 127.198 kb on - strand, within CA264_21320at 127.205 kb on + strand, within CA264_21320at 127.206 kb on - strand, within CA264_21320at 127.206 kb on - strand, within CA264_21320at 127.293 kb on + strand, within CA264_21320at 127.376 kb on - strand, within CA264_21320at 127.376 kb on - strand, within CA264_21320at 127.376 kb on - strand, within CA264_21320at 127.420 kb on + strand, within CA264_21320at 127.421 kb on - strand, within CA264_21320at 127.446 kb on + strand, within CA264_21320at 127.542 kb on + strandat 127.632 kb on + strandat 127.633 kb on - strandat 127.633 kb on - strandat 127.633 kb on - strandat 127.655 kb on - strandat 127.741 kb on - strandat 127.741 kb on - strandat 127.770 kb on - strandat 127.770 kb on - strandat 127.780 kb on - strandat 127.976 kb on + strandat 127.998 kb on - strandat 128.175 kb on - strand, within CA264_21325at 128.223 kb on - strand, within CA264_21325at 128.223 kb on - strand, within CA264_21325at 128.227 kb on + strand, within CA264_21325at 128.227 kb on + strand, within CA264_21325at 128.227 kb on + strand, within CA264_21325at 128.311 kb on - strand, within CA264_21325at 128.362 kb on + strand, within CA264_21325at 128.362 kb on + strand, within CA264_21325at 128.363 kb on - strand, within CA264_21325at 128.363 kb on - strand, within CA264_21325at 128.411 kb on - strand, within CA264_21325at 128.411 kb on - strand, within CA264_21325at 128.463 kb on - strand, within CA264_21325at 128.504 kb on + strand, within CA264_21325at 128.505 kb on - strand, within CA264_21325at 128.505 kb on - strand, within CA264_21325at 128.532 kb on - strand, within CA264_21325at 128.601 kb on + strand, within CA264_21325at 128.814 kb on + strand, within CA264_21325at 128.815 kb on - strand, within CA264_21325at 128.815 kb on - strand, within CA264_21325at 128.815 kb on - strand, within CA264_21325at 128.815 kb on - strand, within CA264_21325at 128.815 kb on - strand, within CA264_21325at 128.831 kb on + strand, within CA264_21325at 128.835 kb on + strand, within CA264_21325at 128.836 kb on - strand, within CA264_21325at 128.836 kb on - strand, within CA264_21325at 128.836 kb on - strand, within CA264_21325at 128.905 kb on + strand, within CA264_21325at 129.016 kb on - strand, within CA264_21325at 129.069 kb on + strand, within CA264_21325at 129.172 kb on + strand, within CA264_21325at 129.172 kb on + strand, within CA264_21325at 129.173 kb on - strand, within CA264_21325at 129.218 kb on + strand, within CA264_21325at 129.252 kb on + strand, within CA264_21325at 129.301 kb on + strand, within CA264_21325at 129.356 kb on + strand, within CA264_21325at 129.396 kb on - strand, within CA264_21325at 129.417 kb on + strand, within CA264_21325at 129.418 kb on - strand, within CA264_21325at 129.426 kb on - strand, within CA264_21325at 129.445 kb on - strand, within CA264_21325at 129.445 kb on - strand, within CA264_21325at 129.445 kb on - strand, within CA264_21325at 129.468 kb on + strand, within CA264_21325at 129.469 kb on - strand, within CA264_21325at 129.531 kb on + strand, within CA264_21325at 129.531 kb on + strand, within CA264_21325at 129.532 kb on - strand, within CA264_21325at 129.532 kb on - strand, within CA264_21325at 129.532 kb on - strand, within CA264_21325at 129.719 kb on + strand, within CA264_21325at 129.720 kb on - strand, within CA264_21325at 129.777 kb on + strand, within CA264_21325at 129.778 kb on - strand, within CA264_21325at 129.781 kb on - strand, within CA264_21325at 129.798 kb on + strand, within CA264_21325at 129.804 kb on - strandat 129.804 kb on - strandat 129.804 kb on - strandat 129.868 kb on - strandat 129.872 kb on - strandat 129.905 kb on + strandat 130.021 kb on + strandat 130.022 kb on - strandat 130.053 kb on + strandat 130.053 kb on + strandat 130.054 kb on - strandat 130.054 kb on - strandat 130.054 kb on - strandat 130.055 kb on + strandat 130.055 kb on + strandat 130.057 kb on + strandat 130.057 kb on + strandat 130.058 kb on - strandat 130.068 kb on + strandat 130.095 kb on + strandat 130.096 kb on - strandat 130.105 kb on + strandat 130.156 kb on - strandat 130.253 kb on + strand, within CA264_21330at 130.254 kb on - strand, within CA264_21330at 130.256 kb on - strand, within CA264_21330at 130.272 kb on + strand, within CA264_21330at 130.272 kb on + strand, within CA264_21330at 130.334 kb on + strand, within CA264_21330at 130.334 kb on + strand, within CA264_21330at 130.335 kb on - strand, within CA264_21330at 130.335 kb on - strand, within CA264_21330at 130.409 kb on - strand, within CA264_21330at 130.409 kb on - strand, within CA264_21330at 130.409 kb on - strand, within CA264_21330at 130.449 kb on - strand, within CA264_21330at 130.453 kb on + strand, within CA264_21330at 130.454 kb on - strand, within CA264_21330at 130.469 kb on - strand, within CA264_21330at 130.540 kb on - strand, within CA264_21330at 130.548 kb on - strand, within CA264_21330at 130.583 kb on - strand, within CA264_21330at 130.654 kb on + strand, within CA264_21330at 130.678 kb on - strand, within CA264_21330at 130.717 kb on + strand, within CA264_21330at 130.718 kb on - strand, within CA264_21330at 130.737 kb on + strand, within CA264_21330at 130.737 kb on + strand, within CA264_21330at 130.737 kb on + strand, within CA264_21330at 130.737 kb on + strand, within CA264_21330at 130.741 kb on + strand, within CA264_21330at 130.749 kb on + strand, within CA264_21330at 130.750 kb on - strand, within CA264_21330at 130.833 kb on + strand, within CA264_21330at 130.833 kb on + strand, within CA264_21330at 130.834 kb on - strand, within CA264_21330at 130.834 kb on - strand, within CA264_21330at 130.834 kb on - strand, within CA264_21330at 130.964 kb on - strand, within CA264_21330at 130.964 kb on - strand, within CA264_21330at 130.984 kb on - strand, within CA264_21330

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 7.5 vol%
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126,834 + +0.9
126,834 + -0.8
126,835 - -0.3
126,874 - -2.1
126,899 + -1.1
126,946 + +0.3
127,075 + CA264_21320 0.21 +0.5
127,080 + CA264_21320 0.22 -0.3
127,094 - CA264_21320 0.24 -2.1
127,197 + CA264_21320 0.39 -0.7
127,198 - CA264_21320 0.40 -1.7
127,205 + CA264_21320 0.41 -1.5
127,206 - CA264_21320 0.41 +1.1
127,206 - CA264_21320 0.41 -0.4
127,293 + CA264_21320 0.53 +0.1
127,376 - CA264_21320 0.66 -0.2
127,376 - CA264_21320 0.66 +0.4
127,376 - CA264_21320 0.66 -0.8
127,420 + CA264_21320 0.72 -0.6
127,421 - CA264_21320 0.72 -0.4
127,446 + CA264_21320 0.76 -0.2
127,542 + -0.7
127,632 + -0.5
127,633 - -1.5
127,633 - +1.1
127,633 - -0.9
127,655 - -1.5
127,741 - -0.8
127,741 - -0.0
127,770 - +1.9
127,770 - -0.9
127,780 - -0.9
127,976 + -0.1
127,998 - +0.4
128,175 - CA264_21325 0.17 -0.1
128,223 - CA264_21325 0.20 -0.3
128,223 - CA264_21325 0.20 +0.9
128,227 + CA264_21325 0.20 +0.1
128,227 + CA264_21325 0.20 +1.1
128,227 + CA264_21325 0.20 -0.9
128,311 - CA264_21325 0.23 +1.9
128,362 + CA264_21325 0.26 -2.5
128,362 + CA264_21325 0.26 -0.1
128,363 - CA264_21325 0.26 +0.7
128,363 - CA264_21325 0.26 +0.8
128,411 - CA264_21325 0.28 -1.4
128,411 - CA264_21325 0.28 +2.0
128,463 - CA264_21325 0.30 -2.9
128,504 + CA264_21325 0.32 -0.9
128,505 - CA264_21325 0.32 -0.1
128,505 - CA264_21325 0.32 +0.1
128,532 - CA264_21325 0.33 +1.1
128,601 + CA264_21325 0.36 -0.1
128,814 + CA264_21325 0.46 -0.4
128,815 - CA264_21325 0.46 -2.3
128,815 - CA264_21325 0.46 -2.3
128,815 - CA264_21325 0.46 +0.3
128,815 - CA264_21325 0.46 +0.6
128,815 - CA264_21325 0.46 -0.7
128,831 + CA264_21325 0.47 -0.6
128,835 + CA264_21325 0.47 +0.3
128,836 - CA264_21325 0.47 +0.8
128,836 - CA264_21325 0.47 -1.7
128,836 - CA264_21325 0.47 -0.6
128,905 + CA264_21325 0.50 +0.7
129,016 - CA264_21325 0.55 +0.1
129,069 + CA264_21325 0.57 -0.5
129,172 + CA264_21325 0.62 -0.5
129,172 + CA264_21325 0.62 -0.7
129,173 - CA264_21325 0.62 +0.1
129,218 + CA264_21325 0.64 +0.6
129,252 + CA264_21325 0.66 -1.2
129,301 + CA264_21325 0.68 +1.1
129,356 + CA264_21325 0.70 -0.2
129,396 - CA264_21325 0.72 -0.3
129,417 + CA264_21325 0.73 +0.2
129,418 - CA264_21325 0.73 -0.3
129,426 - CA264_21325 0.73 -0.9
129,445 - CA264_21325 0.74 +1.1
129,445 - CA264_21325 0.74 -0.7
129,445 - CA264_21325 0.74 -0.2
129,468 + CA264_21325 0.75 +1.1
129,469 - CA264_21325 0.75 -0.5
129,531 + CA264_21325 0.78 -1.2
129,531 + CA264_21325 0.78 -0.3
129,532 - CA264_21325 0.78 -1.0
129,532 - CA264_21325 0.78 -0.3
129,532 - CA264_21325 0.78 -2.2
129,719 + CA264_21325 0.86 -0.5
129,720 - CA264_21325 0.86 -0.6
129,777 + CA264_21325 0.89 +0.3
129,778 - CA264_21325 0.89 +1.1
129,781 - CA264_21325 0.89 -1.3
129,798 + CA264_21325 0.90 -0.7
129,804 - +0.6
129,804 - +0.8
129,804 - -1.1
129,868 - -0.5
129,872 - -0.4
129,905 + -0.5
130,021 + +0.1
130,022 - +0.1
130,053 + -0.3
130,053 + +1.5
130,054 - -0.7
130,054 - +0.1
130,054 - +0.2
130,055 + +0.1
130,055 + -0.6
130,057 + -0.8
130,057 + -0.1
130,058 - -0.5
130,068 + -0.5
130,095 + -2.5
130,096 - +0.1
130,105 + -0.8
130,156 - +0.1
130,253 + CA264_21330 0.15 -1.4
130,254 - CA264_21330 0.15 -0.0
130,256 - CA264_21330 0.15 -1.5
130,272 + CA264_21330 0.16 -1.3
130,272 + CA264_21330 0.16 +0.1
130,334 + CA264_21330 0.21 +0.2
130,334 + CA264_21330 0.21 -0.5
130,335 - CA264_21330 0.21 -1.3
130,335 - CA264_21330 0.21 +1.1
130,409 - CA264_21330 0.26 -1.3
130,409 - CA264_21330 0.26 +0.1
130,409 - CA264_21330 0.26 -1.5
130,449 - CA264_21330 0.29 -0.1
130,453 + CA264_21330 0.30 -1.5
130,454 - CA264_21330 0.30 -0.5
130,469 - CA264_21330 0.31 +0.1
130,540 - CA264_21330 0.36 +1.1
130,548 - CA264_21330 0.37 -0.5
130,583 - CA264_21330 0.39 +0.1
130,654 + CA264_21330 0.45 -0.9
130,678 - CA264_21330 0.46 -0.1
130,717 + CA264_21330 0.49 +0.6
130,718 - CA264_21330 0.49 +0.4
130,737 + CA264_21330 0.51 -0.7
130,737 + CA264_21330 0.51 +0.3
130,737 + CA264_21330 0.51 -0.5
130,737 + CA264_21330 0.51 +1.1
130,741 + CA264_21330 0.51 +2.6
130,749 + CA264_21330 0.52 +0.2
130,750 - CA264_21330 0.52 -1.0
130,833 + CA264_21330 0.58 +1.1
130,833 + CA264_21330 0.58 +0.0
130,834 - CA264_21330 0.58 -1.5
130,834 - CA264_21330 0.58 +0.1
130,834 - CA264_21330 0.58 -0.1
130,964 - CA264_21330 0.67 +0.2
130,964 - CA264_21330 0.67 -0.5
130,984 - CA264_21330 0.69 +0.8

Or see this region's nucleotide sequence