Experiment: m.b. Dimethyl Sulfoxide 7.5 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_21125 and CA264_21130 are separated by 410 nucleotides CA264_21130 and CA264_21135 are separated by 50 nucleotides
CA264_21125: CA264_21125 - hypothetical protein, at 91,290 to 91,496
_21125
CA264_21130: CA264_21130 - hypothetical protein, at 91,907 to 92,332
_21130
CA264_21135: CA264_21135 - cation transporter, at 92,383 to 93,279
_21135
Position (kb)
91
92
93 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 90.907 kb on - strand at 90.939 kb on + strand at 90.939 kb on + strand at 90.940 kb on - strand at 90.940 kb on - strand at 90.941 kb on + strand at 90.941 kb on + strand at 90.941 kb on + strand at 90.942 kb on - strand at 91.010 kb on + strand at 91.016 kb on + strand at 91.028 kb on - strand at 91.028 kb on - strand at 91.092 kb on - strand at 91.130 kb on - strand at 91.132 kb on + strand at 91.133 kb on - strand at 91.133 kb on - strand at 91.180 kb on - strand at 91.180 kb on - strand at 91.180 kb on - strand at 91.184 kb on - strand at 91.210 kb on - strand at 91.221 kb on - strand at 91.221 kb on - strand at 91.223 kb on - strand at 91.253 kb on + strand at 91.254 kb on - strand at 91.258 kb on - strand at 91.259 kb on + strand at 91.332 kb on - strand, within CA264_21125 at 91.382 kb on + strand, within CA264_21125 at 91.436 kb on + strand, within CA264_21125 at 91.446 kb on - strand, within CA264_21125 at 91.457 kb on + strand, within CA264_21125 at 91.459 kb on + strand, within CA264_21125 at 91.460 kb on - strand, within CA264_21125 at 91.460 kb on - strand, within CA264_21125 at 91.522 kb on + strand at 91.525 kb on + strand at 91.525 kb on + strand at 91.558 kb on - strand at 91.558 kb on - strand at 91.591 kb on - strand at 91.592 kb on + strand at 91.593 kb on - strand at 91.593 kb on - strand at 91.593 kb on - strand at 91.593 kb on - strand at 91.593 kb on - strand at 91.593 kb on - strand at 91.593 kb on - strand at 91.593 kb on - strand at 91.593 kb on - strand at 91.596 kb on + strand at 91.597 kb on - strand at 91.597 kb on - strand at 91.597 kb on - strand at 91.598 kb on + strand at 91.605 kb on + strand at 91.605 kb on + strand at 91.605 kb on + strand at 91.606 kb on - strand at 91.606 kb on - strand at 91.627 kb on + strand at 91.627 kb on + strand at 91.634 kb on - strand at 91.652 kb on - strand at 91.652 kb on - strand at 91.652 kb on - strand at 91.670 kb on - strand at 91.730 kb on + strand at 91.730 kb on + strand at 91.732 kb on + strand at 91.733 kb on - strand at 91.762 kb on + strand at 91.763 kb on - strand at 91.790 kb on + strand at 91.838 kb on - strand at 91.866 kb on - strand at 91.956 kb on + strand, within CA264_21130 at 91.956 kb on + strand, within CA264_21130 at 91.956 kb on + strand, within CA264_21130 at 91.957 kb on - strand, within CA264_21130 at 92.071 kb on + strand, within CA264_21130 at 92.185 kb on + strand, within CA264_21130 at 92.185 kb on + strand, within CA264_21130 at 92.185 kb on + strand, within CA264_21130 at 92.187 kb on + strand, within CA264_21130 at 92.188 kb on - strand, within CA264_21130 at 92.188 kb on - strand, within CA264_21130 at 92.188 kb on - strand, within CA264_21130 at 92.249 kb on + strand, within CA264_21130 at 92.251 kb on + strand, within CA264_21130 at 92.258 kb on + strand, within CA264_21130 at 92.259 kb on - strand, within CA264_21130 at 92.259 kb on - strand, within CA264_21130 at 92.259 kb on - strand, within CA264_21130 at 92.287 kb on + strand, within CA264_21130 at 92.287 kb on + strand, within CA264_21130 at 92.291 kb on + strand at 92.291 kb on + strand at 92.292 kb on - strand at 92.292 kb on - strand at 92.292 kb on - strand at 92.292 kb on - strand at 92.293 kb on + strand at 92.327 kb on + strand at 92.328 kb on - strand at 92.328 kb on - strand at 92.328 kb on - strand at 92.332 kb on + strand at 92.350 kb on + strand at 92.351 kb on - strand at 92.351 kb on - strand at 92.358 kb on + strand at 92.359 kb on - strand at 92.364 kb on + strand at 92.402 kb on + strand at 92.403 kb on - strand at 92.461 kb on + strand at 92.461 kb on + strand at 92.462 kb on - strand at 92.463 kb on + strand at 92.500 kb on - strand, within CA264_21135 at 92.543 kb on + strand, within CA264_21135 at 92.670 kb on + strand, within CA264_21135 at 92.698 kb on + strand, within CA264_21135 at 92.740 kb on - strand, within CA264_21135 at 92.740 kb on - strand, within CA264_21135 at 92.740 kb on - strand, within CA264_21135 at 92.788 kb on + strand, within CA264_21135 at 92.788 kb on + strand, within CA264_21135 at 92.788 kb on + strand, within CA264_21135 at 92.788 kb on + strand, within CA264_21135 at 92.788 kb on + strand, within CA264_21135 at 92.788 kb on + strand at 92.789 kb on - strand, within CA264_21135 at 92.789 kb on - strand, within CA264_21135 at 92.789 kb on - strand, within CA264_21135 at 92.789 kb on - strand, within CA264_21135 at 92.789 kb on - strand, within CA264_21135 at 92.836 kb on + strand, within CA264_21135 at 92.836 kb on + strand, within CA264_21135 at 92.877 kb on + strand, within CA264_21135 at 92.881 kb on - strand, within CA264_21135 at 92.914 kb on + strand, within CA264_21135 at 92.915 kb on - strand, within CA264_21135 at 92.917 kb on + strand, within CA264_21135 at 92.944 kb on - strand, within CA264_21135 at 92.944 kb on - strand, within CA264_21135 at 92.946 kb on - strand, within CA264_21135 at 93.168 kb on + strand, within CA264_21135 at 93.168 kb on + strand, within CA264_21135 at 93.188 kb on + strand, within CA264_21135 at 93.278 kb on - strand at 93.280 kb on + strand at 93.281 kb on - strand at 93.283 kb on - strand at 93.327 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 7.5 vol% remove 90,907 - +0.1 90,939 + -0.3 90,939 + -0.4 90,940 - -0.1 90,940 - +0.0 90,941 + -1.5 90,941 + -0.1 90,941 + -2.6 90,942 - +2.4 91,010 + +0.8 91,016 + +0.1 91,028 - -0.6 91,028 - -0.4 91,092 - +0.1 91,130 - -1.1 91,132 + -1.1 91,133 - -0.9 91,133 - +0.8 91,180 - +0.1 91,180 - +0.5 91,180 - +0.3 91,184 - +0.1 91,210 - +0.5 91,221 - -0.5 91,221 - +0.1 91,223 - +0.4 91,253 + -1.1 91,254 - +0.6 91,258 - -0.3 91,259 + -0.9 91,332 - CA264_21125 0.20 +0.8 91,382 + CA264_21125 0.44 -0.1 91,436 + CA264_21125 0.71 -0.7 91,446 - CA264_21125 0.75 -0.2 91,457 + CA264_21125 0.81 +0.0 91,459 + CA264_21125 0.82 -0.0 91,460 - CA264_21125 0.82 -0.7 91,460 - CA264_21125 0.82 -0.4 91,522 + +0.1 91,525 + -0.3 91,525 + +0.3 91,558 - +0.4 91,558 - +1.1 91,591 - -0.2 91,592 + +0.1 91,593 - +0.1 91,593 - -1.3 91,593 - -1.5 91,593 - +2.1 91,593 - +0.4 91,593 - +1.8 91,593 - +3.4 91,593 - +1.1 91,593 - +1.1 91,596 + +0.4 91,597 - +0.1 91,597 - +0.1 91,597 - +0.3 91,598 + +0.2 91,605 + -0.6 91,605 + -0.4 91,605 + -0.7 91,606 - -0.2 91,606 - +0.4 91,627 + +0.7 91,627 + -2.1 91,634 - -0.2 91,652 - +0.0 91,652 - +0.5 91,652 - -1.5 91,670 - -0.4 91,730 + +1.0 91,730 + -1.3 91,732 + +1.9 91,733 - +0.1 91,762 + +0.1 91,763 - -0.1 91,790 + -0.6 91,838 - -0.5 91,866 - -0.8 91,956 + CA264_21130 0.12 +0.1 91,956 + CA264_21130 0.12 +0.5 91,956 + CA264_21130 0.12 -0.5 91,957 - CA264_21130 0.12 -0.7 92,071 + CA264_21130 0.38 -1.9 92,185 + CA264_21130 0.65 +0.5 92,185 + CA264_21130 0.65 -0.7 92,185 + CA264_21130 0.65 -1.5 92,187 + CA264_21130 0.66 -1.3 92,188 - CA264_21130 0.66 +0.2 92,188 - CA264_21130 0.66 -0.2 92,188 - CA264_21130 0.66 -0.2 92,249 + CA264_21130 0.80 +0.7 92,251 + CA264_21130 0.81 -0.6 92,258 + CA264_21130 0.82 -0.4 92,259 - CA264_21130 0.83 -0.2 92,259 - CA264_21130 0.83 -0.4 92,259 - CA264_21130 0.83 -0.6 92,287 + CA264_21130 0.89 +1.1 92,287 + CA264_21130 0.89 +1.2 92,291 + -0.2 92,291 + +0.4 92,292 - +0.1 92,292 - -0.3 92,292 - -0.0 92,292 - -0.5 92,293 + +0.1 92,327 + +1.4 92,328 - -0.4 92,328 - -0.0 92,328 - +0.1 92,332 + +0.9 92,350 + -0.3 92,351 - -1.3 92,351 - -1.3 92,358 + -1.3 92,359 - -1.5 92,364 + -1.1 92,402 + +0.3 92,403 - +1.3 92,461 + -0.0 92,461 + -0.7 92,462 - +0.5 92,463 + +0.8 92,500 - CA264_21135 0.13 -0.2 92,543 + CA264_21135 0.18 -0.9 92,670 + CA264_21135 0.32 -0.1 92,698 + CA264_21135 0.35 +0.1 92,740 - CA264_21135 0.40 -0.5 92,740 - CA264_21135 0.40 -1.4 92,740 - CA264_21135 0.40 -0.6 92,788 + CA264_21135 0.45 -0.1 92,788 + CA264_21135 0.45 +1.9 92,788 + CA264_21135 0.45 -0.3 92,788 + CA264_21135 0.45 -1.7 92,788 + CA264_21135 0.45 -1.9 92,788 + +0.1 92,789 - CA264_21135 0.45 -0.4 92,789 - CA264_21135 0.45 +1.6 92,789 - CA264_21135 0.45 -0.7 92,789 - CA264_21135 0.45 -1.3 92,789 - CA264_21135 0.45 +2.6 92,836 + CA264_21135 0.51 +0.4 92,836 + CA264_21135 0.51 -0.3 92,877 + CA264_21135 0.55 +0.3 92,881 - CA264_21135 0.56 +0.2 92,914 + CA264_21135 0.59 -0.3 92,915 - CA264_21135 0.59 -0.5 92,917 + CA264_21135 0.60 +0.5 92,944 - CA264_21135 0.63 -0.5 92,944 - CA264_21135 0.63 -0.8 92,946 - CA264_21135 0.63 +1.1 93,168 + CA264_21135 0.88 -0.3 93,168 + CA264_21135 0.88 -0.7 93,188 + CA264_21135 0.90 -0.5 93,278 - -0.4 93,280 + -0.9 93,281 - +0.3 93,283 - +0.3 93,327 - +0.1
Or see this region's nucleotide sequence