Experiment: m.b. Dimethyl Sulfoxide 7.5 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_19725 and CA264_19730 are separated by 110 nucleotides CA264_19730 and CA264_19735 are separated by 164 nucleotides CA264_19735 and CA264_19740 overlap by 8 nucleotides CA264_19740 and CA264_19745 are separated by 20 nucleotides
CA264_19725: CA264_19725 - peptidylprolyl isomerase, at 4,552,190 to 4,553,545
_19725
CA264_19730: CA264_19730 - peptidylprolyl isomerase, at 4,553,656 to 4,555,956
_19730
CA264_19735: CA264_19735 - ATP-binding protein, at 4,556,121 to 4,556,531
_19735
CA264_19740: CA264_19740 - anti-sigma F factor antagonist, at 4,556,524 to 4,556,862
_19740
CA264_19745: CA264_19745 - serine/threonine protein phosphatase, at 4,556,883 to 4,559,048
_19745
Position (kb)
4553
4554
4555
4556 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 4553.498 kb on + strand at 4553.571 kb on + strand at 4553.576 kb on - strand at 4553.616 kb on - strand at 4553.618 kb on + strand at 4553.666 kb on - strand at 4553.678 kb on - strand at 4553.858 kb on + strand at 4553.859 kb on - strand at 4553.879 kb on - strand at 4553.991 kb on - strand, within CA264_19730 at 4554.069 kb on - strand, within CA264_19730 at 4554.288 kb on + strand, within CA264_19730 at 4554.288 kb on + strand, within CA264_19730 at 4554.288 kb on + strand, within CA264_19730 at 4554.309 kb on + strand, within CA264_19730 at 4554.408 kb on + strand, within CA264_19730 at 4554.408 kb on + strand, within CA264_19730 at 4554.408 kb on + strand, within CA264_19730 at 4554.409 kb on - strand, within CA264_19730 at 4554.409 kb on - strand, within CA264_19730 at 4554.409 kb on - strand, within CA264_19730 at 4554.410 kb on + strand, within CA264_19730 at 4554.410 kb on + strand, within CA264_19730 at 4554.410 kb on + strand, within CA264_19730 at 4554.410 kb on + strand, within CA264_19730 at 4554.410 kb on + strand, within CA264_19730 at 4554.411 kb on - strand, within CA264_19730 at 4554.539 kb on + strand, within CA264_19730 at 4554.546 kb on + strand, within CA264_19730 at 4554.547 kb on - strand, within CA264_19730 at 4554.548 kb on + strand, within CA264_19730 at 4554.548 kb on + strand, within CA264_19730 at 4554.548 kb on + strand, within CA264_19730 at 4554.549 kb on - strand, within CA264_19730 at 4554.575 kb on + strand, within CA264_19730 at 4554.667 kb on + strand, within CA264_19730 at 4554.667 kb on + strand, within CA264_19730 at 4554.668 kb on - strand, within CA264_19730 at 4554.671 kb on + strand, within CA264_19730 at 4554.671 kb on + strand, within CA264_19730 at 4554.671 kb on + strand, within CA264_19730 at 4554.671 kb on + strand, within CA264_19730 at 4554.671 kb on + strand, within CA264_19730 at 4554.672 kb on - strand, within CA264_19730 at 4554.672 kb on - strand, within CA264_19730 at 4554.672 kb on - strand, within CA264_19730 at 4554.672 kb on - strand, within CA264_19730 at 4554.672 kb on - strand, within CA264_19730 at 4554.672 kb on - strand, within CA264_19730 at 4554.672 kb on - strand, within CA264_19730 at 4554.672 kb on - strand, within CA264_19730 at 4554.677 kb on + strand, within CA264_19730 at 4554.678 kb on - strand, within CA264_19730 at 4554.678 kb on - strand, within CA264_19730 at 4554.695 kb on + strand, within CA264_19730 at 4554.695 kb on + strand, within CA264_19730 at 4554.695 kb on + strand, within CA264_19730 at 4554.695 kb on + strand, within CA264_19730 at 4554.696 kb on - strand, within CA264_19730 at 4554.696 kb on - strand, within CA264_19730 at 4554.752 kb on + strand, within CA264_19730 at 4554.825 kb on + strand, within CA264_19730 at 4554.961 kb on + strand, within CA264_19730 at 4554.962 kb on - strand, within CA264_19730 at 4554.962 kb on - strand, within CA264_19730 at 4554.962 kb on - strand, within CA264_19730 at 4555.164 kb on - strand, within CA264_19730 at 4555.367 kb on + strand, within CA264_19730 at 4555.593 kb on - strand, within CA264_19730 at 4555.637 kb on + strand, within CA264_19730 at 4555.638 kb on - strand, within CA264_19730 at 4555.745 kb on + strand at 4555.746 kb on - strand at 4555.746 kb on - strand at 4555.758 kb on - strand at 4555.781 kb on + strand at 4555.781 kb on + strand at 4555.782 kb on - strand at 4555.782 kb on - strand at 4555.814 kb on + strand at 4555.814 kb on + strand at 4555.815 kb on - strand at 4555.836 kb on + strand at 4555.837 kb on - strand at 4555.837 kb on - strand at 4555.837 kb on - strand at 4555.842 kb on + strand at 4555.842 kb on + strand at 4555.842 kb on + strand at 4555.842 kb on + strand at 4555.843 kb on - strand at 4555.861 kb on - strand at 4555.933 kb on + strand at 4555.933 kb on + strand at 4555.939 kb on + strand at 4555.940 kb on - strand at 4555.940 kb on - strand at 4555.956 kb on + strand at 4556.006 kb on - strand at 4556.035 kb on + strand at 4556.036 kb on - strand at 4556.036 kb on - strand at 4556.109 kb on + strand at 4556.110 kb on - strand at 4556.110 kb on - strand at 4556.122 kb on + strand at 4556.122 kb on + strand at 4556.123 kb on - strand at 4556.525 kb on + strand at 4556.679 kb on + strand, within CA264_19740 at 4556.709 kb on - strand, within CA264_19740 at 4556.744 kb on + strand, within CA264_19740 at 4556.868 kb on + strand at 4556.869 kb on - strand at 4556.938 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 7.5 vol% remove 4,553,498 + -1.7 4,553,571 + -1.1 4,553,576 - -0.0 4,553,616 - +1.7 4,553,618 + +0.1 4,553,666 - +0.3 4,553,678 - +1.3 4,553,858 + -1.1 4,553,859 - -0.1 4,553,879 - -0.1 4,553,991 - CA264_19730 0.15 +0.3 4,554,069 - CA264_19730 0.18 -0.6 4,554,288 + CA264_19730 0.27 +0.6 4,554,288 + CA264_19730 0.27 -0.3 4,554,288 + CA264_19730 0.27 -2.7 4,554,309 + CA264_19730 0.28 +0.3 4,554,408 + CA264_19730 0.33 +1.8 4,554,408 + CA264_19730 0.33 -0.5 4,554,408 + CA264_19730 0.33 -2.2 4,554,409 - CA264_19730 0.33 -1.2 4,554,409 - CA264_19730 0.33 -0.1 4,554,409 - CA264_19730 0.33 -1.5 4,554,410 + CA264_19730 0.33 -0.6 4,554,410 + CA264_19730 0.33 -1.6 4,554,410 + CA264_19730 0.33 +0.3 4,554,410 + CA264_19730 0.33 -1.1 4,554,410 + CA264_19730 0.33 -1.3 4,554,411 - CA264_19730 0.33 -0.7 4,554,539 + CA264_19730 0.38 -1.6 4,554,546 + CA264_19730 0.39 +0.1 4,554,547 - CA264_19730 0.39 -1.1 4,554,548 + CA264_19730 0.39 -2.8 4,554,548 + CA264_19730 0.39 -1.2 4,554,548 + CA264_19730 0.39 -0.6 4,554,549 - CA264_19730 0.39 -0.9 4,554,575 + CA264_19730 0.40 -0.2 4,554,667 + CA264_19730 0.44 +1.3 4,554,667 + CA264_19730 0.44 -1.0 4,554,668 - CA264_19730 0.44 -2.3 4,554,671 + CA264_19730 0.44 -2.6 4,554,671 + CA264_19730 0.44 -0.1 4,554,671 + CA264_19730 0.44 -0.9 4,554,671 + CA264_19730 0.44 -0.5 4,554,671 + CA264_19730 0.44 -0.3 4,554,672 - CA264_19730 0.44 -2.7 4,554,672 - CA264_19730 0.44 -0.6 4,554,672 - CA264_19730 0.44 -0.3 4,554,672 - CA264_19730 0.44 -0.4 4,554,672 - CA264_19730 0.44 +1.0 4,554,672 - CA264_19730 0.44 +0.3 4,554,672 - CA264_19730 0.44 -0.3 4,554,672 - CA264_19730 0.44 +2.0 4,554,677 + CA264_19730 0.44 +0.1 4,554,678 - CA264_19730 0.44 +0.3 4,554,678 - CA264_19730 0.44 +0.2 4,554,695 + CA264_19730 0.45 +0.9 4,554,695 + CA264_19730 0.45 -0.7 4,554,695 + CA264_19730 0.45 +0.8 4,554,695 + CA264_19730 0.45 -0.5 4,554,696 - CA264_19730 0.45 -1.0 4,554,696 - CA264_19730 0.45 +1.3 4,554,752 + CA264_19730 0.48 +0.4 4,554,825 + CA264_19730 0.51 -0.3 4,554,961 + CA264_19730 0.57 -0.5 4,554,962 - CA264_19730 0.57 -3.1 4,554,962 - CA264_19730 0.57 -0.5 4,554,962 - CA264_19730 0.57 -0.5 4,555,164 - CA264_19730 0.66 +0.2 4,555,367 + CA264_19730 0.74 -1.1 4,555,593 - CA264_19730 0.84 -2.0 4,555,637 + CA264_19730 0.86 +1.6 4,555,638 - CA264_19730 0.86 -0.7 4,555,745 + +0.8 4,555,746 - -0.3 4,555,746 - +0.5 4,555,758 - +0.7 4,555,781 + +1.0 4,555,781 + +0.4 4,555,782 - -3.4 4,555,782 - -1.3 4,555,814 + +0.4 4,555,814 + -0.2 4,555,815 - +0.3 4,555,836 + +0.1 4,555,837 - -0.7 4,555,837 - -1.0 4,555,837 - -2.1 4,555,842 + +0.8 4,555,842 + -1.1 4,555,842 + -1.2 4,555,842 + -0.7 4,555,843 - -1.1 4,555,861 - -0.7 4,555,933 + +3.6 4,555,933 + -0.3 4,555,939 + +0.5 4,555,940 - -0.8 4,555,940 - -2.1 4,555,956 + -0.3 4,556,006 - -0.0 4,556,035 + -0.2 4,556,036 - -1.1 4,556,036 - +0.8 4,556,109 + +0.2 4,556,110 - +1.3 4,556,110 - +0.3 4,556,122 + +2.0 4,556,122 + +0.4 4,556,123 - +0.0 4,556,525 + +0.4 4,556,679 + CA264_19740 0.46 +0.2 4,556,709 - CA264_19740 0.55 +0.3 4,556,744 + CA264_19740 0.65 +0.0 4,556,868 + +0.3 4,556,869 - -0.4 4,556,938 + +0.5
Or see this region's nucleotide sequence