Experiment: m.b. Dimethyl Sulfoxide 7.5 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_19145 and CA264_19150 are separated by 22 nucleotides CA264_19150 and CA264_19155 are separated by 475 nucleotides
CA264_19145: CA264_19145 - hypothetical protein, at 4,447,957 to 4,449,057
_19145
CA264_19150: CA264_19150 - TonB dependent receptor, at 4,449,080 to 4,450,996
_19150
CA264_19155: CA264_19155 - DNA-3-methyladenine glycosylase, at 4,451,472 to 4,452,071
_19155
Position (kb)
4449
4450
4451 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 4448.080 kb on - strand, within CA264_19145 at 4448.080 kb on - strand, within CA264_19145 at 4448.080 kb on - strand, within CA264_19145 at 4448.080 kb on - strand, within CA264_19145 at 4448.081 kb on + strand, within CA264_19145 at 4448.112 kb on - strand, within CA264_19145 at 4448.171 kb on + strand, within CA264_19145 at 4448.186 kb on + strand, within CA264_19145 at 4448.190 kb on + strand, within CA264_19145 at 4448.192 kb on + strand, within CA264_19145 at 4448.192 kb on + strand, within CA264_19145 at 4448.195 kb on + strand, within CA264_19145 at 4448.195 kb on + strand, within CA264_19145 at 4448.196 kb on - strand, within CA264_19145 at 4448.261 kb on + strand, within CA264_19145 at 4448.262 kb on - strand, within CA264_19145 at 4448.332 kb on + strand, within CA264_19145 at 4448.333 kb on - strand, within CA264_19145 at 4448.494 kb on + strand, within CA264_19145 at 4448.502 kb on - strand, within CA264_19145 at 4448.502 kb on - strand, within CA264_19145 at 4448.515 kb on + strand, within CA264_19145 at 4448.516 kb on - strand, within CA264_19145 at 4448.570 kb on + strand, within CA264_19145 at 4448.631 kb on - strand, within CA264_19145 at 4448.668 kb on + strand, within CA264_19145 at 4448.705 kb on - strand, within CA264_19145 at 4448.751 kb on + strand, within CA264_19145 at 4448.752 kb on - strand, within CA264_19145 at 4448.772 kb on + strand, within CA264_19145 at 4448.790 kb on - strand, within CA264_19145 at 4448.802 kb on - strand, within CA264_19145 at 4448.858 kb on - strand, within CA264_19145 at 4448.869 kb on - strand, within CA264_19145 at 4448.890 kb on - strand, within CA264_19145 at 4449.069 kb on + strand at 4449.069 kb on + strand at 4449.069 kb on + strand at 4449.070 kb on - strand at 4449.070 kb on - strand at 4449.070 kb on - strand at 4449.074 kb on + strand at 4449.076 kb on + strand at 4449.077 kb on - strand at 4449.077 kb on - strand at 4449.077 kb on - strand at 4449.077 kb on - strand at 4449.077 kb on - strand at 4449.082 kb on - strand at 4449.091 kb on + strand at 4449.110 kb on - strand at 4449.110 kb on - strand at 4449.111 kb on + strand at 4449.111 kb on + strand at 4449.297 kb on + strand, within CA264_19150 at 4449.297 kb on + strand, within CA264_19150 at 4449.435 kb on + strand, within CA264_19150 at 4449.435 kb on + strand, within CA264_19150 at 4449.436 kb on - strand, within CA264_19150 at 4449.436 kb on - strand, within CA264_19150 at 4449.436 kb on - strand, within CA264_19150 at 4449.436 kb on - strand, within CA264_19150 at 4449.440 kb on - strand, within CA264_19150 at 4449.441 kb on + strand, within CA264_19150 at 4449.441 kb on + strand, within CA264_19150 at 4449.442 kb on - strand, within CA264_19150 at 4449.464 kb on + strand, within CA264_19150 at 4449.545 kb on + strand, within CA264_19150 at 4449.597 kb on + strand, within CA264_19150 at 4449.638 kb on + strand, within CA264_19150 at 4449.848 kb on + strand, within CA264_19150 at 4449.849 kb on - strand, within CA264_19150 at 4449.952 kb on - strand, within CA264_19150 at 4450.023 kb on + strand, within CA264_19150 at 4450.023 kb on + strand, within CA264_19150 at 4450.047 kb on + strand, within CA264_19150 at 4450.098 kb on + strand, within CA264_19150 at 4450.249 kb on - strand, within CA264_19150 at 4450.381 kb on + strand, within CA264_19150 at 4450.382 kb on - strand, within CA264_19150 at 4450.448 kb on + strand, within CA264_19150 at 4450.524 kb on + strand, within CA264_19150 at 4450.573 kb on - strand, within CA264_19150 at 4450.573 kb on - strand, within CA264_19150 at 4450.748 kb on + strand, within CA264_19150 at 4450.749 kb on + strand, within CA264_19150 at 4450.750 kb on - strand, within CA264_19150 at 4450.750 kb on - strand, within CA264_19150 at 4450.756 kb on + strand, within CA264_19150 at 4450.757 kb on - strand, within CA264_19150 at 4450.757 kb on - strand, within CA264_19150 at 4450.761 kb on + strand, within CA264_19150 at 4450.809 kb on + strand at 4450.809 kb on + strand at 4450.832 kb on + strand at 4450.833 kb on - strand at 4450.939 kb on + strand at 4450.999 kb on + strand at 4450.999 kb on + strand at 4450.999 kb on + strand at 4451.000 kb on - strand at 4451.010 kb on + strand at 4451.010 kb on + strand at 4451.010 kb on + strand at 4451.011 kb on - strand at 4451.011 kb on - strand at 4451.011 kb on - strand at 4451.011 kb on - strand at 4451.262 kb on - strand at 4451.270 kb on - strand at 4451.282 kb on - strand at 4451.282 kb on - strand at 4451.331 kb on + strand at 4451.410 kb on + strand at 4451.411 kb on - strand at 4451.464 kb on + strand at 4451.541 kb on + strand, within CA264_19155 at 4451.542 kb on - strand, within CA264_19155 at 4451.542 kb on - strand, within CA264_19155 at 4451.547 kb on + strand, within CA264_19155 at 4451.547 kb on + strand, within CA264_19155 at 4451.547 kb on + strand, within CA264_19155 at 4451.548 kb on - strand, within CA264_19155 at 4451.548 kb on - strand, within CA264_19155 at 4451.671 kb on - strand, within CA264_19155 at 4451.671 kb on - strand, within CA264_19155 at 4451.671 kb on - strand, within CA264_19155 at 4451.691 kb on + strand, within CA264_19155 at 4451.691 kb on + strand, within CA264_19155 at 4451.692 kb on - strand, within CA264_19155 at 4451.692 kb on - strand, within CA264_19155 at 4451.692 kb on - strand, within CA264_19155 at 4451.695 kb on + strand, within CA264_19155 at 4451.695 kb on + strand, within CA264_19155 at 4451.695 kb on + strand, within CA264_19155 at 4451.696 kb on - strand, within CA264_19155 at 4451.697 kb on + strand, within CA264_19155 at 4451.715 kb on + strand, within CA264_19155 at 4451.715 kb on + strand, within CA264_19155 at 4451.717 kb on - strand, within CA264_19155 at 4451.751 kb on - strand, within CA264_19155 at 4451.791 kb on + strand, within CA264_19155 at 4451.792 kb on - strand, within CA264_19155 at 4451.832 kb on - strand, within CA264_19155 at 4451.832 kb on - strand, within CA264_19155 at 4451.833 kb on + strand, within CA264_19155 at 4451.921 kb on + strand, within CA264_19155 at 4451.948 kb on - strand, within CA264_19155 at 4451.992 kb on + strand, within CA264_19155 at 4451.993 kb on - strand, within CA264_19155
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 7.5 vol% remove 4,448,080 - CA264_19145 0.11 -0.8 4,448,080 - CA264_19145 0.11 -0.2 4,448,080 - CA264_19145 0.11 +1.3 4,448,080 - CA264_19145 0.11 +0.0 4,448,081 + CA264_19145 0.11 +1.3 4,448,112 - CA264_19145 0.14 +0.1 4,448,171 + CA264_19145 0.19 -0.7 4,448,186 + CA264_19145 0.21 +0.1 4,448,190 + CA264_19145 0.21 +0.7 4,448,192 + CA264_19145 0.21 -0.6 4,448,192 + CA264_19145 0.21 -0.3 4,448,195 + CA264_19145 0.22 -1.2 4,448,195 + CA264_19145 0.22 +1.7 4,448,196 - CA264_19145 0.22 -2.3 4,448,261 + CA264_19145 0.28 -0.0 4,448,262 - CA264_19145 0.28 -1.3 4,448,332 + CA264_19145 0.34 +2.3 4,448,333 - CA264_19145 0.34 -1.1 4,448,494 + CA264_19145 0.49 -0.8 4,448,502 - CA264_19145 0.50 -0.0 4,448,502 - CA264_19145 0.50 +0.6 4,448,515 + CA264_19145 0.51 -0.7 4,448,516 - CA264_19145 0.51 -1.0 4,448,570 + CA264_19145 0.56 +2.3 4,448,631 - CA264_19145 0.61 +1.9 4,448,668 + CA264_19145 0.65 +2.9 4,448,705 - CA264_19145 0.68 -0.9 4,448,751 + CA264_19145 0.72 +0.1 4,448,752 - CA264_19145 0.72 -0.3 4,448,772 + CA264_19145 0.74 -0.0 4,448,790 - CA264_19145 0.76 -1.3 4,448,802 - CA264_19145 0.77 -1.0 4,448,858 - CA264_19145 0.82 +2.1 4,448,869 - CA264_19145 0.83 -0.6 4,448,890 - CA264_19145 0.85 -1.0 4,449,069 + -0.1 4,449,069 + -1.7 4,449,069 + -0.3 4,449,070 - +0.6 4,449,070 - -0.4 4,449,070 - -0.2 4,449,074 + -0.5 4,449,076 + +0.0 4,449,077 - -0.7 4,449,077 - +0.1 4,449,077 - -0.5 4,449,077 - -0.3 4,449,077 - +0.2 4,449,082 - +0.3 4,449,091 + -1.0 4,449,110 - +0.3 4,449,110 - -0.2 4,449,111 + +0.2 4,449,111 + +1.3 4,449,297 + CA264_19150 0.11 +0.1 4,449,297 + CA264_19150 0.11 +1.1 4,449,435 + CA264_19150 0.19 -0.2 4,449,435 + CA264_19150 0.19 -0.4 4,449,436 - CA264_19150 0.19 -1.3 4,449,436 - CA264_19150 0.19 +0.7 4,449,436 - CA264_19150 0.19 -0.0 4,449,436 - CA264_19150 0.19 +0.3 4,449,440 - CA264_19150 0.19 -0.3 4,449,441 + CA264_19150 0.19 -1.0 4,449,441 + CA264_19150 0.19 -1.3 4,449,442 - CA264_19150 0.19 -0.4 4,449,464 + CA264_19150 0.20 +0.4 4,449,545 + CA264_19150 0.24 +0.3 4,449,597 + CA264_19150 0.27 +2.0 4,449,638 + CA264_19150 0.29 -0.4 4,449,848 + CA264_19150 0.40 -0.0 4,449,849 - CA264_19150 0.40 -0.3 4,449,952 - CA264_19150 0.45 -0.7 4,450,023 + CA264_19150 0.49 -0.2 4,450,023 + CA264_19150 0.49 +0.3 4,450,047 + CA264_19150 0.50 -0.0 4,450,098 + CA264_19150 0.53 +0.4 4,450,249 - CA264_19150 0.61 -1.3 4,450,381 + CA264_19150 0.68 -0.7 4,450,382 - CA264_19150 0.68 -0.7 4,450,448 + CA264_19150 0.71 -0.6 4,450,524 + CA264_19150 0.75 -0.0 4,450,573 - CA264_19150 0.78 +0.3 4,450,573 - CA264_19150 0.78 +0.5 4,450,748 + CA264_19150 0.87 -0.7 4,450,749 + CA264_19150 0.87 -0.7 4,450,750 - CA264_19150 0.87 -0.8 4,450,750 - CA264_19150 0.87 -0.4 4,450,756 + CA264_19150 0.87 -0.3 4,450,757 - CA264_19150 0.87 -1.0 4,450,757 - CA264_19150 0.87 -1.6 4,450,761 + CA264_19150 0.88 +0.6 4,450,809 + -1.3 4,450,809 + +1.6 4,450,832 + -0.7 4,450,833 - -1.5 4,450,939 + -1.3 4,450,999 + -0.0 4,450,999 + -0.8 4,450,999 + +0.7 4,451,000 - +0.3 4,451,010 + +1.3 4,451,010 + -0.7 4,451,010 + -1.9 4,451,011 - -0.5 4,451,011 - +2.0 4,451,011 - +0.0 4,451,011 - -0.5 4,451,262 - -1.5 4,451,270 - +0.0 4,451,282 - +0.7 4,451,282 - +2.9 4,451,331 + +0.1 4,451,410 + -0.3 4,451,411 - -0.4 4,451,464 + -0.7 4,451,541 + CA264_19155 0.12 -1.9 4,451,542 - CA264_19155 0.12 +0.0 4,451,542 - CA264_19155 0.12 +0.8 4,451,547 + CA264_19155 0.12 -1.2 4,451,547 + CA264_19155 0.12 +1.9 4,451,547 + CA264_19155 0.12 -1.2 4,451,548 - CA264_19155 0.13 -0.3 4,451,548 - CA264_19155 0.13 +1.3 4,451,671 - CA264_19155 0.33 +0.1 4,451,671 - CA264_19155 0.33 +2.6 4,451,671 - CA264_19155 0.33 -0.2 4,451,691 + CA264_19155 0.36 -1.3 4,451,691 + CA264_19155 0.36 -0.0 4,451,692 - CA264_19155 0.37 -0.4 4,451,692 - CA264_19155 0.37 +0.4 4,451,692 - CA264_19155 0.37 -0.8 4,451,695 + CA264_19155 0.37 +0.3 4,451,695 + CA264_19155 0.37 +1.3 4,451,695 + CA264_19155 0.37 +0.7 4,451,696 - CA264_19155 0.37 +0.1 4,451,697 + CA264_19155 0.38 +0.3 4,451,715 + CA264_19155 0.41 +0.9 4,451,715 + CA264_19155 0.41 -0.5 4,451,717 - CA264_19155 0.41 -0.7 4,451,751 - CA264_19155 0.47 +0.3 4,451,791 + CA264_19155 0.53 +0.3 4,451,792 - CA264_19155 0.53 +1.3 4,451,832 - CA264_19155 0.60 +2.3 4,451,832 - CA264_19155 0.60 -0.2 4,451,833 + CA264_19155 0.60 -0.3 4,451,921 + CA264_19155 0.75 -0.4 4,451,948 - CA264_19155 0.79 -1.3 4,451,992 + CA264_19155 0.87 +0.0 4,451,993 - CA264_19155 0.87 -0.9
Or see this region's nucleotide sequence