Experiment: m.b. Dimethyl Sulfoxide 7.5 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_17720 and CA264_17725 are separated by 147 nucleotides CA264_17725 and CA264_17730 are separated by 20 nucleotides
CA264_17720: CA264_17720 - beta-ketoadipyl CoA thiolase, at 4,122,624 to 4,123,823
_17720
CA264_17725: CA264_17725 - tRNA pseudouridine synthase A, at 4,123,971 to 4,124,723
_17725
CA264_17730: CA264_17730 - methionine gamma-lyase, at 4,124,744 to 4,126,051
_17730
Position (kb)
4123
4124
4125 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4122.981 kb on - strand, within CA264_17720 at 4123.023 kb on + strand, within CA264_17720 at 4123.045 kb on - strand, within CA264_17720 at 4123.071 kb on - strand, within CA264_17720 at 4123.080 kb on - strand, within CA264_17720 at 4123.089 kb on - strand, within CA264_17720 at 4123.182 kb on - strand, within CA264_17720 at 4123.182 kb on - strand, within CA264_17720 at 4123.182 kb on - strand, within CA264_17720 at 4123.193 kb on - strand, within CA264_17720 at 4123.197 kb on + strand, within CA264_17720 at 4123.197 kb on + strand, within CA264_17720 at 4123.388 kb on - strand, within CA264_17720 at 4123.443 kb on - strand, within CA264_17720 at 4123.443 kb on - strand, within CA264_17720 at 4123.490 kb on - strand, within CA264_17720 at 4123.555 kb on + strand, within CA264_17720 at 4123.556 kb on - strand, within CA264_17720 at 4123.585 kb on + strand, within CA264_17720 at 4123.612 kb on + strand, within CA264_17720 at 4123.658 kb on - strand, within CA264_17720 at 4123.658 kb on - strand, within CA264_17720 at 4123.658 kb on - strand, within CA264_17720 at 4123.670 kb on + strand, within CA264_17720 at 4123.670 kb on + strand, within CA264_17720 at 4123.704 kb on - strand at 4123.765 kb on + strand at 4123.804 kb on + strand at 4123.810 kb on - strand at 4123.820 kb on - strand at 4123.821 kb on + strand at 4123.822 kb on - strand at 4123.822 kb on - strand at 4123.822 kb on - strand at 4123.960 kb on - strand at 4123.990 kb on + strand at 4124.071 kb on + strand, within CA264_17725 at 4124.075 kb on + strand, within CA264_17725 at 4124.080 kb on + strand, within CA264_17725 at 4124.080 kb on + strand, within CA264_17725 at 4124.124 kb on - strand, within CA264_17725 at 4124.192 kb on - strand, within CA264_17725 at 4124.244 kb on + strand, within CA264_17725 at 4124.245 kb on - strand, within CA264_17725 at 4124.301 kb on + strand, within CA264_17725 at 4124.337 kb on + strand, within CA264_17725 at 4124.340 kb on + strand, within CA264_17725 at 4124.341 kb on - strand, within CA264_17725 at 4124.397 kb on - strand, within CA264_17725 at 4124.397 kb on - strand, within CA264_17725 at 4124.397 kb on - strand, within CA264_17725 at 4124.405 kb on + strand, within CA264_17725 at 4124.406 kb on - strand, within CA264_17725 at 4124.543 kb on + strand, within CA264_17725 at 4124.544 kb on - strand, within CA264_17725 at 4124.634 kb on - strand, within CA264_17725 at 4124.671 kb on + strand at 4124.672 kb on - strand at 4124.673 kb on + strand at 4124.674 kb on - strand at 4124.702 kb on + strand at 4124.702 kb on + strand at 4124.703 kb on - strand at 4124.708 kb on - strand at 4124.734 kb on - strand at 4124.739 kb on + strand at 4124.740 kb on - strand at 4124.740 kb on - strand at 4124.740 kb on - strand at 4124.740 kb on - strand at 4124.743 kb on + strand at 4124.744 kb on - strand at 4124.751 kb on + strand at 4124.751 kb on + strand at 4124.778 kb on + strand at 4124.786 kb on - strand at 4124.808 kb on + strand at 4124.863 kb on + strand at 4124.863 kb on + strand at 4124.864 kb on - strand at 4124.864 kb on - strand at 4124.867 kb on + strand at 4124.930 kb on + strand, within CA264_17730 at 4124.964 kb on + strand, within CA264_17730 at 4124.964 kb on + strand, within CA264_17730 at 4124.964 kb on + strand, within CA264_17730 at 4124.965 kb on - strand, within CA264_17730 at 4125.006 kb on + strand, within CA264_17730 at 4125.118 kb on + strand, within CA264_17730 at 4125.136 kb on + strand, within CA264_17730 at 4125.136 kb on + strand, within CA264_17730 at 4125.137 kb on - strand, within CA264_17730 at 4125.140 kb on + strand, within CA264_17730 at 4125.140 kb on + strand, within CA264_17730 at 4125.141 kb on - strand, within CA264_17730 at 4125.158 kb on + strand, within CA264_17730 at 4125.159 kb on - strand, within CA264_17730 at 4125.159 kb on - strand, within CA264_17730 at 4125.170 kb on - strand, within CA264_17730 at 4125.179 kb on - strand, within CA264_17730 at 4125.187 kb on + strand, within CA264_17730 at 4125.196 kb on + strand, within CA264_17730 at 4125.232 kb on - strand, within CA264_17730 at 4125.279 kb on + strand, within CA264_17730 at 4125.280 kb on - strand, within CA264_17730 at 4125.280 kb on - strand, within CA264_17730 at 4125.281 kb on + strand, within CA264_17730 at 4125.281 kb on + strand, within CA264_17730 at 4125.282 kb on - strand, within CA264_17730 at 4125.282 kb on - strand, within CA264_17730 at 4125.337 kb on - strand, within CA264_17730 at 4125.378 kb on + strand, within CA264_17730 at 4125.378 kb on + strand, within CA264_17730 at 4125.379 kb on - strand, within CA264_17730 at 4125.391 kb on + strand, within CA264_17730 at 4125.391 kb on + strand, within CA264_17730 at 4125.391 kb on + strand, within CA264_17730 at 4125.394 kb on + strand, within CA264_17730 at 4125.395 kb on - strand, within CA264_17730 at 4125.450 kb on + strand, within CA264_17730 at 4125.451 kb on - strand, within CA264_17730 at 4125.452 kb on + strand, within CA264_17730 at 4125.452 kb on + strand, within CA264_17730 at 4125.468 kb on - strand, within CA264_17730 at 4125.695 kb on + strand, within CA264_17730 at 4125.696 kb on - strand, within CA264_17730 at 4125.698 kb on + strand, within CA264_17730 at 4125.699 kb on - strand, within CA264_17730
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 7.5 vol% remove 4,122,981 - CA264_17720 0.30 +0.1 4,123,023 + CA264_17720 0.33 +1.4 4,123,045 - CA264_17720 0.35 +1.2 4,123,071 - CA264_17720 0.37 +0.7 4,123,080 - CA264_17720 0.38 -1.2 4,123,089 - CA264_17720 0.39 +0.3 4,123,182 - CA264_17720 0.47 +0.9 4,123,182 - CA264_17720 0.47 +1.4 4,123,182 - CA264_17720 0.47 -0.0 4,123,193 - CA264_17720 0.47 +0.4 4,123,197 + CA264_17720 0.48 -0.4 4,123,197 + CA264_17720 0.48 -1.3 4,123,388 - CA264_17720 0.64 +1.6 4,123,443 - CA264_17720 0.68 -0.2 4,123,443 - CA264_17720 0.68 +0.3 4,123,490 - CA264_17720 0.72 +0.6 4,123,555 + CA264_17720 0.78 -0.2 4,123,556 - CA264_17720 0.78 +0.2 4,123,585 + CA264_17720 0.80 -1.1 4,123,612 + CA264_17720 0.82 +0.4 4,123,658 - CA264_17720 0.86 +0.1 4,123,658 - CA264_17720 0.86 -0.7 4,123,658 - CA264_17720 0.86 +0.3 4,123,670 + CA264_17720 0.87 -0.6 4,123,670 + CA264_17720 0.87 -0.5 4,123,704 - -1.5 4,123,765 + +0.1 4,123,804 + +0.2 4,123,810 - +1.5 4,123,820 - -0.3 4,123,821 + -0.3 4,123,822 - -0.9 4,123,822 - +0.1 4,123,822 - +0.7 4,123,960 - -0.3 4,123,990 + +0.4 4,124,071 + CA264_17725 0.13 -2.4 4,124,075 + CA264_17725 0.14 -0.0 4,124,080 + CA264_17725 0.14 +2.0 4,124,080 + CA264_17725 0.14 -1.6 4,124,124 - CA264_17725 0.20 -1.2 4,124,192 - CA264_17725 0.29 -1.5 4,124,244 + CA264_17725 0.36 -0.8 4,124,245 - CA264_17725 0.36 +0.4 4,124,301 + CA264_17725 0.44 -1.5 4,124,337 + CA264_17725 0.49 -1.5 4,124,340 + CA264_17725 0.49 -1.2 4,124,341 - CA264_17725 0.49 -2.0 4,124,397 - CA264_17725 0.57 -1.2 4,124,397 - CA264_17725 0.57 -2.3 4,124,397 - CA264_17725 0.57 -1.7 4,124,405 + CA264_17725 0.58 +0.1 4,124,406 - CA264_17725 0.58 -2.6 4,124,543 + CA264_17725 0.76 -2.2 4,124,544 - CA264_17725 0.76 -0.5 4,124,634 - CA264_17725 0.88 +1.4 4,124,671 + -1.4 4,124,672 - -0.1 4,124,673 + -1.3 4,124,674 - +1.0 4,124,702 + -1.1 4,124,702 + +0.3 4,124,703 - +1.4 4,124,708 - -0.2 4,124,734 - -0.7 4,124,739 + -0.9 4,124,740 - -0.6 4,124,740 - +1.4 4,124,740 - -0.4 4,124,740 - +1.4 4,124,743 + -1.9 4,124,744 - +0.3 4,124,751 + +1.2 4,124,751 + -0.5 4,124,778 + -0.0 4,124,786 - -1.6 4,124,808 + +1.0 4,124,863 + +0.4 4,124,863 + +0.3 4,124,864 - -1.6 4,124,864 - -0.7 4,124,867 + +0.5 4,124,930 + CA264_17730 0.14 +2.4 4,124,964 + CA264_17730 0.17 +0.1 4,124,964 + CA264_17730 0.17 -0.1 4,124,964 + CA264_17730 0.17 +0.3 4,124,965 - CA264_17730 0.17 -0.6 4,125,006 + CA264_17730 0.20 +1.0 4,125,118 + CA264_17730 0.29 +0.9 4,125,136 + CA264_17730 0.30 +0.8 4,125,136 + CA264_17730 0.30 +0.2 4,125,137 - CA264_17730 0.30 +0.1 4,125,140 + CA264_17730 0.30 -0.3 4,125,140 + CA264_17730 0.30 -0.7 4,125,141 - CA264_17730 0.30 +0.1 4,125,158 + CA264_17730 0.32 -0.9 4,125,159 - CA264_17730 0.32 +0.1 4,125,159 - CA264_17730 0.32 +0.8 4,125,170 - CA264_17730 0.33 -1.3 4,125,179 - CA264_17730 0.33 +0.4 4,125,187 + CA264_17730 0.34 +2.1 4,125,196 + CA264_17730 0.35 -0.3 4,125,232 - CA264_17730 0.37 +1.7 4,125,279 + CA264_17730 0.41 -0.1 4,125,280 - CA264_17730 0.41 +0.2 4,125,280 - CA264_17730 0.41 +0.1 4,125,281 + CA264_17730 0.41 +0.0 4,125,281 + CA264_17730 0.41 -0.7 4,125,282 - CA264_17730 0.41 -1.0 4,125,282 - CA264_17730 0.41 -0.4 4,125,337 - CA264_17730 0.45 +0.1 4,125,378 + CA264_17730 0.48 -0.2 4,125,378 + CA264_17730 0.48 -1.4 4,125,379 - CA264_17730 0.49 -0.0 4,125,391 + CA264_17730 0.49 +0.9 4,125,391 + CA264_17730 0.49 -0.4 4,125,391 + CA264_17730 0.49 -0.9 4,125,394 + CA264_17730 0.50 +0.3 4,125,395 - CA264_17730 0.50 +0.7 4,125,450 + CA264_17730 0.54 -0.1 4,125,451 - CA264_17730 0.54 -0.4 4,125,452 + CA264_17730 0.54 -0.6 4,125,452 + CA264_17730 0.54 -0.4 4,125,468 - CA264_17730 0.55 -0.4 4,125,695 + CA264_17730 0.73 -0.6 4,125,696 - CA264_17730 0.73 -0.1 4,125,698 + CA264_17730 0.73 +0.1 4,125,699 - CA264_17730 0.73 -0.3
Or see this region's nucleotide sequence