Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_17355

Experiment: m.b. Dimethyl Sulfoxide 7.5 vol%

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_17350 and CA264_17355 are separated by 349 nucleotidesCA264_17355 and CA264_17360 are separated by 7 nucleotides CA264_17350: CA264_17350 - hypothetical protein, at 4,044,368 to 4,045,135 _17350 CA264_17355: CA264_17355 - ribonuclease R, at 4,045,485 to 4,047,767 _17355 CA264_17360: CA264_17360 - geranyl transferase, at 4,047,775 to 4,048,749 _17360 Position (kb) 4045 4046 4047 4048Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 4044.574 kb on - strand, within CA264_17350at 4044.574 kb on - strand, within CA264_17350at 4044.574 kb on - strand, within CA264_17350at 4044.620 kb on + strand, within CA264_17350at 4044.621 kb on - strand, within CA264_17350at 4044.660 kb on - strand, within CA264_17350at 4044.692 kb on - strand, within CA264_17350at 4044.735 kb on - strand, within CA264_17350at 4044.779 kb on - strand, within CA264_17350at 4044.926 kb on + strand, within CA264_17350at 4044.926 kb on + strand, within CA264_17350at 4044.926 kb on + strand, within CA264_17350at 4044.996 kb on - strand, within CA264_17350at 4045.014 kb on + strand, within CA264_17350at 4045.015 kb on - strand, within CA264_17350at 4045.015 kb on - strand, within CA264_17350at 4045.032 kb on + strand, within CA264_17350at 4045.033 kb on - strand, within CA264_17350at 4045.033 kb on - strand, within CA264_17350at 4045.045 kb on + strand, within CA264_17350at 4045.046 kb on - strand, within CA264_17350at 4045.046 kb on - strand, within CA264_17350at 4045.046 kb on - strand, within CA264_17350at 4045.046 kb on - strand, within CA264_17350at 4045.046 kb on - strand, within CA264_17350at 4045.046 kb on - strand, within CA264_17350at 4045.048 kb on - strand, within CA264_17350at 4045.133 kb on + strandat 4045.134 kb on - strandat 4045.134 kb on - strandat 4045.257 kb on - strandat 4045.257 kb on - strandat 4045.320 kb on + strandat 4045.331 kb on - strandat 4045.331 kb on - strandat 4045.334 kb on + strandat 4045.399 kb on + strandat 4045.399 kb on + strandat 4045.400 kb on - strandat 4045.401 kb on + strandat 4045.401 kb on + strandat 4045.402 kb on - strandat 4045.402 kb on - strandat 4045.404 kb on + strandat 4045.404 kb on + strandat 4045.408 kb on + strandat 4045.423 kb on - strandat 4045.494 kb on - strandat 4045.494 kb on - strandat 4045.837 kb on - strand, within CA264_17355at 4045.837 kb on - strand, within CA264_17355at 4045.903 kb on - strand, within CA264_17355at 4045.904 kb on + strand, within CA264_17355at 4045.904 kb on + strand, within CA264_17355at 4045.910 kb on - strand, within CA264_17355at 4046.036 kb on - strand, within CA264_17355at 4046.158 kb on + strand, within CA264_17355at 4046.519 kb on - strand, within CA264_17355at 4046.526 kb on + strand, within CA264_17355at 4046.583 kb on + strand, within CA264_17355at 4046.722 kb on - strand, within CA264_17355at 4046.897 kb on + strand, within CA264_17355at 4046.904 kb on - strand, within CA264_17355at 4046.937 kb on + strand, within CA264_17355at 4046.937 kb on + strand, within CA264_17355at 4046.938 kb on - strand, within CA264_17355at 4046.968 kb on + strand, within CA264_17355at 4047.019 kb on - strand, within CA264_17355at 4047.133 kb on + strand, within CA264_17355at 4047.134 kb on - strand, within CA264_17355at 4047.332 kb on + strand, within CA264_17355at 4047.486 kb on - strand, within CA264_17355at 4047.546 kb on - strandat 4047.546 kb on - strandat 4047.616 kb on - strandat 4047.636 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 7.5 vol%
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4,044,574 - CA264_17350 0.27 +0.4
4,044,574 - CA264_17350 0.27 -0.2
4,044,574 - CA264_17350 0.27 +0.5
4,044,620 + CA264_17350 0.33 -0.2
4,044,621 - CA264_17350 0.33 -0.0
4,044,660 - CA264_17350 0.38 +0.4
4,044,692 - CA264_17350 0.42 +0.2
4,044,735 - CA264_17350 0.48 +1.4
4,044,779 - CA264_17350 0.54 +0.6
4,044,926 + CA264_17350 0.73 +0.1
4,044,926 + CA264_17350 0.73 +0.0
4,044,926 + CA264_17350 0.73 +0.0
4,044,996 - CA264_17350 0.82 -0.6
4,045,014 + CA264_17350 0.84 -1.6
4,045,015 - CA264_17350 0.84 +0.8
4,045,015 - CA264_17350 0.84 -0.6
4,045,032 + CA264_17350 0.86 -0.4
4,045,033 - CA264_17350 0.87 +0.3
4,045,033 - CA264_17350 0.87 +0.6
4,045,045 + CA264_17350 0.88 -1.1
4,045,046 - CA264_17350 0.88 +0.1
4,045,046 - CA264_17350 0.88 +0.7
4,045,046 - CA264_17350 0.88 +0.4
4,045,046 - CA264_17350 0.88 -0.1
4,045,046 - CA264_17350 0.88 +0.4
4,045,046 - CA264_17350 0.88 +0.3
4,045,048 - CA264_17350 0.89 +0.2
4,045,133 + -1.0
4,045,134 - +0.4
4,045,134 - -0.6
4,045,257 - +0.3
4,045,257 - -1.4
4,045,320 + +0.2
4,045,331 - -0.0
4,045,331 - +0.5
4,045,334 + -0.3
4,045,399 + -0.1
4,045,399 + -1.2
4,045,400 - +0.4
4,045,401 + -0.3
4,045,401 + -0.3
4,045,402 - +0.3
4,045,402 - -0.4
4,045,404 + +0.3
4,045,404 + +0.2
4,045,408 + +0.5
4,045,423 - -0.0
4,045,494 - -0.6
4,045,494 - +0.5
4,045,837 - CA264_17355 0.15 +0.8
4,045,837 - CA264_17355 0.15 +0.8
4,045,903 - CA264_17355 0.18 -1.9
4,045,904 + CA264_17355 0.18 -1.0
4,045,904 + CA264_17355 0.18 -1.8
4,045,910 - CA264_17355 0.19 -2.5
4,046,036 - CA264_17355 0.24 +0.1
4,046,158 + CA264_17355 0.29 -1.2
4,046,519 - CA264_17355 0.45 +0.8
4,046,526 + CA264_17355 0.46 -1.8
4,046,583 + CA264_17355 0.48 +1.9
4,046,722 - CA264_17355 0.54 -1.8
4,046,897 + CA264_17355 0.62 -2.2
4,046,904 - CA264_17355 0.62 +0.4
4,046,937 + CA264_17355 0.64 -0.6
4,046,937 + CA264_17355 0.64 -0.2
4,046,938 - CA264_17355 0.64 -0.2
4,046,968 + CA264_17355 0.65 +0.4
4,047,019 - CA264_17355 0.67 -0.7
4,047,133 + CA264_17355 0.72 -1.7
4,047,134 - CA264_17355 0.72 -2.1
4,047,332 + CA264_17355 0.81 -2.1
4,047,486 - CA264_17355 0.88 -2.8
4,047,546 - -0.6
4,047,546 - -2.1
4,047,616 - -1.8
4,047,636 + +0.4

Or see this region's nucleotide sequence