Experiment: m.b. Dimethyl Sulfoxide 7.5 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_17090 and CA264_17095 are separated by 31 nucleotides CA264_17095 and CA264_17100 are separated by 109 nucleotides CA264_17100 and CA264_17105 are separated by 63 nucleotides CA264_17105 and CA264_17110 are separated by 55 nucleotides
CA264_17090: CA264_17090 - inositol monophosphatase, at 3,978,260 to 3,979,063
_17090
CA264_17095: CA264_17095 - FeoB-associated Cys-rich membrane protein, at 3,979,095 to 3,979,274
_17095
CA264_17100: CA264_17100 - hypothetical protein, at 3,979,384 to 3,979,722
_17100
CA264_17105: CA264_17105 - mechanosensitive ion channel protein MscS, at 3,979,786 to 3,980,718
_17105
CA264_17110: CA264_17110 - radical SAM protein, at 3,980,774 to 3,981,796
_17110
Position (kb)
3979
3980
3981 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 3978.793 kb on + strand, within CA264_17090 at 3978.842 kb on + strand, within CA264_17090 at 3978.842 kb on + strand, within CA264_17090 at 3978.843 kb on - strand, within CA264_17090 at 3978.847 kb on - strand, within CA264_17090 at 3978.878 kb on + strand, within CA264_17090 at 3978.953 kb on - strand, within CA264_17090 at 3979.071 kb on - strand at 3979.088 kb on + strand at 3979.089 kb on - strand at 3979.094 kb on + strand at 3979.100 kb on - strand at 3979.115 kb on - strand, within CA264_17095 at 3979.115 kb on - strand, within CA264_17095 at 3979.272 kb on + strand at 3979.324 kb on + strand at 3979.341 kb on + strand at 3979.344 kb on - strand at 3979.344 kb on - strand at 3979.371 kb on + strand at 3979.376 kb on - strand at 3979.381 kb on - strand at 3979.381 kb on - strand at 3979.383 kb on + strand at 3979.384 kb on - strand at 3979.392 kb on + strand at 3979.393 kb on - strand at 3979.425 kb on + strand, within CA264_17100 at 3979.450 kb on - strand, within CA264_17100 at 3979.531 kb on - strand, within CA264_17100 at 3979.535 kb on + strand, within CA264_17100 at 3979.717 kb on - strand at 3979.720 kb on + strand at 3979.721 kb on - strand at 3979.763 kb on + strand at 3979.855 kb on + strand at 3979.873 kb on + strand at 3979.874 kb on - strand at 3979.876 kb on - strand at 3979.974 kb on - strand, within CA264_17105 at 3979.974 kb on - strand, within CA264_17105 at 3979.974 kb on - strand, within CA264_17105 at 3979.974 kb on - strand, within CA264_17105 at 3979.974 kb on - strand, within CA264_17105 at 3980.013 kb on + strand, within CA264_17105 at 3980.045 kb on + strand, within CA264_17105 at 3980.045 kb on + strand, within CA264_17105 at 3980.046 kb on - strand, within CA264_17105 at 3980.046 kb on - strand, within CA264_17105 at 3980.046 kb on - strand, within CA264_17105 at 3980.046 kb on - strand, within CA264_17105 at 3980.102 kb on - strand, within CA264_17105 at 3980.149 kb on + strand, within CA264_17105 at 3980.161 kb on + strand, within CA264_17105 at 3980.162 kb on - strand, within CA264_17105 at 3980.162 kb on - strand, within CA264_17105 at 3980.298 kb on - strand, within CA264_17105 at 3980.504 kb on + strand, within CA264_17105 at 3980.598 kb on - strand, within CA264_17105 at 3980.718 kb on + strand at 3980.719 kb on - strand at 3980.719 kb on - strand at 3980.721 kb on - strand at 3980.746 kb on - strand at 3980.801 kb on - strand at 3980.819 kb on + strand at 3980.879 kb on + strand, within CA264_17110 at 3980.879 kb on + strand, within CA264_17110 at 3980.919 kb on + strand, within CA264_17110 at 3981.020 kb on + strand, within CA264_17110 at 3981.021 kb on - strand, within CA264_17110 at 3981.028 kb on - strand, within CA264_17110 at 3981.060 kb on + strand, within CA264_17110 at 3981.061 kb on - strand, within CA264_17110 at 3981.164 kb on + strand, within CA264_17110 at 3981.316 kb on - strand, within CA264_17110 at 3981.316 kb on - strand, within CA264_17110 at 3981.316 kb on - strand, within CA264_17110 at 3981.338 kb on + strand, within CA264_17110 at 3981.340 kb on + strand, within CA264_17110 at 3981.341 kb on - strand, within CA264_17110 at 3981.344 kb on + strand, within CA264_17110 at 3981.451 kb on - strand, within CA264_17110 at 3981.484 kb on - strand, within CA264_17110 at 3981.513 kb on + strand, within CA264_17110 at 3981.659 kb on - strand, within CA264_17110 at 3981.709 kb on - strand at 3981.713 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 7.5 vol% remove 3,978,793 + CA264_17090 0.66 -0.5 3,978,842 + CA264_17090 0.72 -0.0 3,978,842 + CA264_17090 0.72 +0.3 3,978,843 - CA264_17090 0.73 -0.2 3,978,847 - CA264_17090 0.73 +0.6 3,978,878 + CA264_17090 0.77 -0.4 3,978,953 - CA264_17090 0.86 +0.9 3,979,071 - +0.0 3,979,088 + +0.2 3,979,089 - -2.3 3,979,094 + +0.4 3,979,100 - -1.2 3,979,115 - CA264_17095 0.11 -1.2 3,979,115 - CA264_17095 0.11 +0.9 3,979,272 + -0.5 3,979,324 + -0.2 3,979,341 + -0.1 3,979,344 - -1.2 3,979,344 - -1.4 3,979,371 + -0.8 3,979,376 - -0.4 3,979,381 - -0.5 3,979,381 - +1.7 3,979,383 + -0.2 3,979,384 - -1.2 3,979,392 + -0.1 3,979,393 - +4.0 3,979,425 + CA264_17100 0.12 +0.9 3,979,450 - CA264_17100 0.19 -0.2 3,979,531 - CA264_17100 0.43 -0.2 3,979,535 + CA264_17100 0.45 -0.9 3,979,717 - -0.3 3,979,720 + +0.2 3,979,721 - +0.2 3,979,763 + +1.4 3,979,855 + -0.3 3,979,873 + +0.4 3,979,874 - +1.2 3,979,876 - -0.3 3,979,974 - CA264_17105 0.20 -1.2 3,979,974 - CA264_17105 0.20 -0.7 3,979,974 - CA264_17105 0.20 -0.4 3,979,974 - CA264_17105 0.20 -0.4 3,979,974 - CA264_17105 0.20 -1.0 3,980,013 + CA264_17105 0.24 -2.2 3,980,045 + CA264_17105 0.28 +1.1 3,980,045 + CA264_17105 0.28 -1.8 3,980,046 - CA264_17105 0.28 -0.0 3,980,046 - CA264_17105 0.28 -0.3 3,980,046 - CA264_17105 0.28 -0.3 3,980,046 - CA264_17105 0.28 +0.7 3,980,102 - CA264_17105 0.34 -0.4 3,980,149 + CA264_17105 0.39 -1.0 3,980,161 + CA264_17105 0.40 -0.4 3,980,162 - CA264_17105 0.40 +0.2 3,980,162 - CA264_17105 0.40 -1.0 3,980,298 - CA264_17105 0.55 -0.9 3,980,504 + CA264_17105 0.77 -0.4 3,980,598 - CA264_17105 0.87 +0.5 3,980,718 + -0.1 3,980,719 - +0.2 3,980,719 - +0.2 3,980,721 - +1.7 3,980,746 - +0.5 3,980,801 - +0.4 3,980,819 + -0.4 3,980,879 + CA264_17110 0.10 +1.5 3,980,879 + CA264_17110 0.10 -0.0 3,980,919 + CA264_17110 0.14 +0.7 3,981,020 + CA264_17110 0.24 +0.7 3,981,021 - CA264_17110 0.24 -0.1 3,981,028 - CA264_17110 0.25 -0.3 3,981,060 + CA264_17110 0.28 -0.2 3,981,061 - CA264_17110 0.28 +0.6 3,981,164 + CA264_17110 0.38 +0.7 3,981,316 - CA264_17110 0.53 -0.9 3,981,316 - CA264_17110 0.53 +0.5 3,981,316 - CA264_17110 0.53 -1.4 3,981,338 + CA264_17110 0.55 +3.0 3,981,340 + CA264_17110 0.55 +0.1 3,981,341 - CA264_17110 0.55 +0.6 3,981,344 + CA264_17110 0.56 +0.3 3,981,451 - CA264_17110 0.66 -1.2 3,981,484 - CA264_17110 0.69 +2.4 3,981,513 + CA264_17110 0.72 +0.0 3,981,659 - CA264_17110 0.87 +1.1 3,981,709 - +0.7 3,981,713 - +0.1
Or see this region's nucleotide sequence