Experiment: m.b. Dimethyl Sulfoxide 7.5 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_16520 and CA264_16525 are separated by 193 nucleotides CA264_16525 and CA264_16530 are separated by 37 nucleotides CA264_16530 and CA264_16535 are separated by 287 nucleotides
CA264_16520: CA264_16520 - DNA-binding response regulator, at 3,839,350 to 3,840,720
_16520
CA264_16525: CA264_16525 - hypothetical protein, at 3,840,914 to 3,841,246
_16525
CA264_16530: CA264_16530 - hypothetical protein, at 3,841,284 to 3,841,667
_16530
CA264_16535: CA264_16535 - DNA polymerase I, at 3,841,955 to 3,844,801
_16535
Position (kb)
3840
3841
3842 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 3840.181 kb on + strand, within CA264_16520 at 3840.182 kb on - strand, within CA264_16520 at 3840.197 kb on + strand, within CA264_16520 at 3840.198 kb on - strand, within CA264_16520 at 3840.198 kb on - strand, within CA264_16520 at 3840.227 kb on - strand, within CA264_16520 at 3840.227 kb on - strand, within CA264_16520 at 3840.229 kb on - strand, within CA264_16520 at 3840.229 kb on - strand, within CA264_16520 at 3840.239 kb on - strand, within CA264_16520 at 3840.239 kb on - strand, within CA264_16520 at 3840.265 kb on - strand, within CA264_16520 at 3840.274 kb on + strand, within CA264_16520 at 3840.333 kb on + strand, within CA264_16520 at 3840.334 kb on - strand, within CA264_16520 at 3840.411 kb on + strand, within CA264_16520 at 3840.411 kb on + strand, within CA264_16520 at 3840.411 kb on + strand, within CA264_16520 at 3840.411 kb on + strand, within CA264_16520 at 3840.412 kb on - strand, within CA264_16520 at 3840.412 kb on - strand, within CA264_16520 at 3840.420 kb on + strand, within CA264_16520 at 3840.421 kb on - strand, within CA264_16520 at 3840.421 kb on - strand, within CA264_16520 at 3840.476 kb on + strand, within CA264_16520 at 3840.626 kb on + strand at 3840.627 kb on - strand at 3840.637 kb on + strand at 3840.637 kb on + strand at 3840.638 kb on - strand at 3840.723 kb on + strand at 3840.723 kb on + strand at 3840.723 kb on + strand at 3840.724 kb on - strand at 3840.724 kb on - strand at 3840.724 kb on - strand at 3840.725 kb on + strand at 3840.725 kb on + strand at 3840.725 kb on + strand at 3840.730 kb on + strand at 3840.791 kb on + strand at 3840.791 kb on + strand at 3840.792 kb on - strand at 3840.812 kb on + strand at 3840.812 kb on + strand at 3840.812 kb on + strand at 3840.813 kb on - strand at 3840.814 kb on + strand at 3840.820 kb on + strand at 3840.822 kb on + strand at 3840.822 kb on + strand at 3840.827 kb on - strand at 3840.831 kb on + strand at 3840.831 kb on + strand at 3840.831 kb on + strand at 3840.831 kb on + strand at 3840.831 kb on + strand at 3840.832 kb on - strand at 3840.832 kb on - strand at 3840.833 kb on + strand at 3840.833 kb on + strand at 3840.834 kb on - strand at 3840.834 kb on - strand at 3840.834 kb on - strand at 3840.834 kb on - strand at 3840.834 kb on - strand at 3840.834 kb on - strand at 3840.834 kb on - strand at 3840.834 kb on - strand at 3840.834 kb on - strand at 3840.836 kb on + strand at 3840.837 kb on - strand at 3840.837 kb on - strand at 3840.842 kb on + strand at 3840.843 kb on - strand at 3840.843 kb on - strand at 3840.843 kb on - strand at 3840.863 kb on + strand at 3840.865 kb on + strand at 3840.865 kb on + strand at 3840.867 kb on + strand at 3840.868 kb on - strand at 3840.893 kb on + strand at 3840.916 kb on - strand at 3840.924 kb on - strand at 3840.945 kb on + strand at 3840.993 kb on + strand, within CA264_16525 at 3841.032 kb on + strand, within CA264_16525 at 3841.032 kb on + strand, within CA264_16525 at 3841.033 kb on - strand, within CA264_16525 at 3841.035 kb on - strand, within CA264_16525 at 3841.035 kb on - strand, within CA264_16525 at 3841.059 kb on + strand, within CA264_16525 at 3841.174 kb on + strand, within CA264_16525 at 3841.174 kb on + strand, within CA264_16525 at 3841.226 kb on + strand at 3841.229 kb on + strand at 3841.229 kb on + strand at 3841.229 kb on + strand at 3841.229 kb on + strand at 3841.271 kb on - strand at 3841.281 kb on + strand at 3841.282 kb on - strand at 3841.282 kb on - strand at 3841.282 kb on - strand at 3841.282 kb on - strand at 3841.373 kb on + strand, within CA264_16530 at 3841.373 kb on + strand, within CA264_16530 at 3841.374 kb on - strand, within CA264_16530 at 3841.383 kb on + strand, within CA264_16530 at 3841.383 kb on + strand, within CA264_16530 at 3841.383 kb on + strand, within CA264_16530 at 3841.384 kb on - strand, within CA264_16530 at 3841.391 kb on - strand, within CA264_16530 at 3841.441 kb on - strand, within CA264_16530 at 3841.441 kb on - strand, within CA264_16530 at 3841.441 kb on - strand, within CA264_16530 at 3841.651 kb on - strand at 3841.657 kb on - strand at 3841.657 kb on - strand at 3841.767 kb on - strand at 3841.769 kb on - strand at 3841.783 kb on + strand at 3841.888 kb on - strand at 3841.888 kb on - strand at 3841.893 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 7.5 vol% remove 3,840,181 + CA264_16520 0.61 -0.3 3,840,182 - CA264_16520 0.61 -0.5 3,840,197 + CA264_16520 0.62 +0.3 3,840,198 - CA264_16520 0.62 -0.5 3,840,198 - CA264_16520 0.62 -0.1 3,840,227 - CA264_16520 0.64 +0.9 3,840,227 - CA264_16520 0.64 -0.2 3,840,229 - CA264_16520 0.64 -0.5 3,840,229 - CA264_16520 0.64 +0.7 3,840,239 - CA264_16520 0.65 +0.1 3,840,239 - CA264_16520 0.65 +2.2 3,840,265 - CA264_16520 0.67 +0.5 3,840,274 + CA264_16520 0.67 +0.6 3,840,333 + CA264_16520 0.72 +0.5 3,840,334 - CA264_16520 0.72 +0.0 3,840,411 + CA264_16520 0.77 +0.2 3,840,411 + CA264_16520 0.77 +0.6 3,840,411 + CA264_16520 0.77 +0.3 3,840,411 + CA264_16520 0.77 +0.2 3,840,412 - CA264_16520 0.77 -1.1 3,840,412 - CA264_16520 0.77 +0.7 3,840,420 + CA264_16520 0.78 +0.1 3,840,421 - CA264_16520 0.78 +0.5 3,840,421 - CA264_16520 0.78 +0.3 3,840,476 + CA264_16520 0.82 +0.2 3,840,626 + -0.7 3,840,627 - +1.9 3,840,637 + -0.0 3,840,637 + -0.5 3,840,638 - -0.5 3,840,723 + +0.3 3,840,723 + +0.3 3,840,723 + +3.9 3,840,724 - -1.1 3,840,724 - +0.6 3,840,724 - +0.0 3,840,725 + +2.2 3,840,725 + +0.5 3,840,725 + +0.4 3,840,730 + +0.1 3,840,791 + +0.8 3,840,791 + +0.2 3,840,792 - -1.7 3,840,812 + +0.2 3,840,812 + -0.5 3,840,812 + -0.2 3,840,813 - -1.0 3,840,814 + +0.9 3,840,820 + -0.2 3,840,822 + -0.6 3,840,822 + +2.3 3,840,827 - +0.3 3,840,831 + +0.5 3,840,831 + +0.3 3,840,831 + -0.2 3,840,831 + +0.2 3,840,831 + -0.2 3,840,832 - -0.7 3,840,832 - +0.5 3,840,833 + +0.6 3,840,833 + -0.4 3,840,834 - -0.1 3,840,834 - -0.2 3,840,834 - -0.6 3,840,834 - +0.4 3,840,834 - +0.5 3,840,834 - -0.7 3,840,834 - +0.0 3,840,834 - +0.2 3,840,834 - -2.4 3,840,836 + +0.5 3,840,837 - +0.5 3,840,837 - -0.8 3,840,842 + -1.5 3,840,843 - +0.3 3,840,843 - +0.5 3,840,843 - +0.9 3,840,863 + +0.5 3,840,865 + +0.0 3,840,865 + +3.2 3,840,867 + +1.0 3,840,868 - +0.2 3,840,893 + +1.3 3,840,916 - -2.2 3,840,924 - -0.1 3,840,945 + +0.3 3,840,993 + CA264_16525 0.24 +1.1 3,841,032 + CA264_16525 0.35 +1.1 3,841,032 + CA264_16525 0.35 +0.2 3,841,033 - CA264_16525 0.36 +1.3 3,841,035 - CA264_16525 0.36 -0.7 3,841,035 - CA264_16525 0.36 -0.7 3,841,059 + CA264_16525 0.44 +0.5 3,841,174 + CA264_16525 0.78 +0.6 3,841,174 + CA264_16525 0.78 +0.1 3,841,226 + -0.7 3,841,229 + +0.3 3,841,229 + +0.7 3,841,229 + -0.2 3,841,229 + +0.3 3,841,271 - +1.1 3,841,281 + +0.0 3,841,282 - +0.5 3,841,282 - +0.3 3,841,282 - +0.4 3,841,282 - +1.1 3,841,373 + CA264_16530 0.23 -1.0 3,841,373 + CA264_16530 0.23 -0.0 3,841,374 - CA264_16530 0.23 +0.6 3,841,383 + CA264_16530 0.26 -0.2 3,841,383 + CA264_16530 0.26 -0.5 3,841,383 + CA264_16530 0.26 +0.6 3,841,384 - CA264_16530 0.26 -0.2 3,841,391 - CA264_16530 0.28 -0.5 3,841,441 - CA264_16530 0.41 +0.5 3,841,441 - CA264_16530 0.41 -0.1 3,841,441 - CA264_16530 0.41 +0.8 3,841,651 - +0.2 3,841,657 - +1.3 3,841,657 - +1.0 3,841,767 - +0.9 3,841,769 - +1.0 3,841,783 + +0.5 3,841,888 - +0.2 3,841,888 - +0.1 3,841,893 - -0.1
Or see this region's nucleotide sequence