Experiment: m.b. Dimethyl Sulfoxide 7.5 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_16140 and CA264_16145 are separated by 18 nucleotides CA264_16145 and CA264_16150 are separated by 4 nucleotides CA264_16150 and CA264_16155 are separated by 249 nucleotides
CA264_16140: CA264_16140 - efflux transporter periplasmic adaptor subunit, at 3,757,502 to 3,758,653
_16140
CA264_16145: CA264_16145 - copper transporter, at 3,758,672 to 3,762,079
_16145
CA264_16150: CA264_16150 - acyl carrier protein, at 3,762,084 to 3,762,341
_16150
CA264_16155: CA264_16155 - hypothetical protein, at 3,762,591 to 3,763,331
_16155
Position (kb)
3758
3759
3760
3761
3762
3763 Strain fitness (log2 ratio)
-1
0
1
2
3 at 3757.746 kb on + strand, within CA264_16140 at 3757.822 kb on - strand, within CA264_16140 at 3757.894 kb on - strand, within CA264_16140 at 3757.953 kb on + strand, within CA264_16140 at 3757.986 kb on - strand, within CA264_16140 at 3758.066 kb on - strand, within CA264_16140 at 3758.097 kb on + strand, within CA264_16140 at 3758.098 kb on - strand, within CA264_16140 at 3758.315 kb on - strand, within CA264_16140 at 3758.416 kb on - strand, within CA264_16140 at 3758.456 kb on + strand, within CA264_16140 at 3758.456 kb on + strand, within CA264_16140 at 3758.457 kb on - strand, within CA264_16140 at 3758.462 kb on + strand, within CA264_16140 at 3758.493 kb on + strand, within CA264_16140 at 3758.493 kb on + strand, within CA264_16140 at 3758.494 kb on - strand, within CA264_16140 at 3758.494 kb on - strand, within CA264_16140 at 3758.494 kb on - strand, within CA264_16140 at 3758.652 kb on - strand at 3758.711 kb on - strand at 3758.719 kb on + strand at 3758.719 kb on + strand at 3758.720 kb on - strand at 3758.720 kb on - strand at 3758.723 kb on + strand at 3758.737 kb on - strand at 3758.737 kb on - strand at 3758.740 kb on + strand at 3758.765 kb on + strand at 3758.768 kb on - strand at 3758.893 kb on - strand at 3759.101 kb on + strand, within CA264_16145 at 3759.101 kb on + strand, within CA264_16145 at 3759.102 kb on - strand, within CA264_16145 at 3759.102 kb on - strand, within CA264_16145 at 3759.139 kb on - strand, within CA264_16145 at 3759.139 kb on - strand, within CA264_16145 at 3759.198 kb on + strand, within CA264_16145 at 3759.284 kb on - strand, within CA264_16145 at 3759.295 kb on + strand, within CA264_16145 at 3759.333 kb on + strand, within CA264_16145 at 3759.333 kb on + strand, within CA264_16145 at 3759.488 kb on + strand, within CA264_16145 at 3759.489 kb on - strand, within CA264_16145 at 3759.514 kb on + strand, within CA264_16145 at 3759.874 kb on - strand, within CA264_16145 at 3759.998 kb on - strand, within CA264_16145 at 3759.998 kb on - strand, within CA264_16145 at 3760.117 kb on + strand, within CA264_16145 at 3760.239 kb on - strand, within CA264_16145 at 3760.308 kb on - strand, within CA264_16145 at 3760.527 kb on - strand, within CA264_16145 at 3760.527 kb on - strand, within CA264_16145 at 3760.607 kb on - strand, within CA264_16145 at 3760.715 kb on - strand, within CA264_16145 at 3760.782 kb on + strand, within CA264_16145 at 3760.932 kb on + strand, within CA264_16145 at 3760.956 kb on + strand, within CA264_16145 at 3761.099 kb on - strand, within CA264_16145 at 3761.123 kb on + strand, within CA264_16145 at 3761.141 kb on + strand, within CA264_16145 at 3761.161 kb on + strand, within CA264_16145 at 3761.196 kb on - strand, within CA264_16145 at 3761.271 kb on - strand, within CA264_16145 at 3761.605 kb on + strand, within CA264_16145 at 3761.686 kb on + strand, within CA264_16145 at 3761.701 kb on - strand, within CA264_16145 at 3761.832 kb on - strand at 3761.970 kb on - strand at 3762.056 kb on - strand at 3762.068 kb on + strand at 3762.069 kb on - strand at 3762.078 kb on - strand at 3762.084 kb on - strand at 3762.151 kb on + strand, within CA264_16150 at 3762.339 kb on + strand at 3762.397 kb on + strand at 3762.538 kb on + strand at 3762.553 kb on + strand at 3762.555 kb on + strand at 3762.568 kb on + strand at 3762.568 kb on + strand at 3762.569 kb on - strand at 3762.569 kb on - strand at 3762.569 kb on - strand at 3762.575 kb on + strand at 3762.582 kb on - strand at 3762.728 kb on - strand, within CA264_16155 at 3762.773 kb on + strand, within CA264_16155 at 3762.865 kb on + strand, within CA264_16155 at 3762.887 kb on - strand, within CA264_16155 at 3762.987 kb on - strand, within CA264_16155 at 3763.065 kb on - strand, within CA264_16155
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 7.5 vol% remove 3,757,746 + CA264_16140 0.21 +0.2 3,757,822 - CA264_16140 0.28 +1.1 3,757,894 - CA264_16140 0.34 +2.3 3,757,953 + CA264_16140 0.39 -0.7 3,757,986 - CA264_16140 0.42 +0.8 3,758,066 - CA264_16140 0.49 +0.9 3,758,097 + CA264_16140 0.52 -1.0 3,758,098 - CA264_16140 0.52 +1.0 3,758,315 - CA264_16140 0.71 -1.6 3,758,416 - CA264_16140 0.79 -0.1 3,758,456 + CA264_16140 0.83 -0.3 3,758,456 + CA264_16140 0.83 +0.2 3,758,457 - CA264_16140 0.83 +0.9 3,758,462 + CA264_16140 0.83 +1.0 3,758,493 + CA264_16140 0.86 +0.4 3,758,493 + CA264_16140 0.86 -0.3 3,758,494 - CA264_16140 0.86 +0.6 3,758,494 - CA264_16140 0.86 +3.3 3,758,494 - CA264_16140 0.86 -0.3 3,758,652 - -0.2 3,758,711 - +1.2 3,758,719 + +0.3 3,758,719 + -1.1 3,758,720 - -1.5 3,758,720 - +0.2 3,758,723 + +3.3 3,758,737 - -0.7 3,758,737 - +0.1 3,758,740 + +0.9 3,758,765 + -1.5 3,758,768 - -0.1 3,758,893 - -1.2 3,759,101 + CA264_16145 0.13 +0.0 3,759,101 + CA264_16145 0.13 -0.8 3,759,102 - CA264_16145 0.13 -0.4 3,759,102 - CA264_16145 0.13 +0.2 3,759,139 - CA264_16145 0.14 +0.0 3,759,139 - CA264_16145 0.14 -1.0 3,759,198 + CA264_16145 0.15 -0.1 3,759,284 - CA264_16145 0.18 +0.8 3,759,295 + CA264_16145 0.18 -0.5 3,759,333 + CA264_16145 0.19 -1.0 3,759,333 + CA264_16145 0.19 +2.2 3,759,488 + CA264_16145 0.24 +0.6 3,759,489 - CA264_16145 0.24 -0.5 3,759,514 + CA264_16145 0.25 +0.3 3,759,874 - CA264_16145 0.35 +0.5 3,759,998 - CA264_16145 0.39 +0.8 3,759,998 - CA264_16145 0.39 -0.6 3,760,117 + CA264_16145 0.42 +0.1 3,760,239 - CA264_16145 0.46 +0.9 3,760,308 - CA264_16145 0.48 -0.7 3,760,527 - CA264_16145 0.54 -0.3 3,760,527 - CA264_16145 0.54 +0.3 3,760,607 - CA264_16145 0.57 +0.9 3,760,715 - CA264_16145 0.60 -0.2 3,760,782 + CA264_16145 0.62 +0.0 3,760,932 + CA264_16145 0.66 +0.6 3,760,956 + CA264_16145 0.67 +0.3 3,761,099 - CA264_16145 0.71 +0.2 3,761,123 + CA264_16145 0.72 +0.3 3,761,141 + CA264_16145 0.72 -0.5 3,761,161 + CA264_16145 0.73 +1.0 3,761,196 - CA264_16145 0.74 -0.7 3,761,271 - CA264_16145 0.76 -0.1 3,761,605 + CA264_16145 0.86 -0.2 3,761,686 + CA264_16145 0.88 -0.8 3,761,701 - CA264_16145 0.89 +0.6 3,761,832 - -0.5 3,761,970 - +0.3 3,762,056 - +0.0 3,762,068 + +0.4 3,762,069 - -0.6 3,762,078 - +1.3 3,762,084 - -0.2 3,762,151 + CA264_16150 0.26 -1.2 3,762,339 + -0.2 3,762,397 + +0.6 3,762,538 + -0.0 3,762,553 + +0.8 3,762,555 + +0.7 3,762,568 + +0.1 3,762,568 + +0.0 3,762,569 - -0.8 3,762,569 - -0.6 3,762,569 - -0.7 3,762,575 + +0.0 3,762,582 - -0.9 3,762,728 - CA264_16155 0.18 -1.2 3,762,773 + CA264_16155 0.25 +0.0 3,762,865 + CA264_16155 0.37 +0.2 3,762,887 - CA264_16155 0.40 -0.0 3,762,987 - CA264_16155 0.53 +0.1 3,763,065 - CA264_16155 0.64 +0.5
Or see this region's nucleotide sequence