Experiment: m.b. Dimethyl Sulfoxide 7.5 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_16135 and CA264_16140 are separated by 31 nucleotides CA264_16140 and CA264_16145 are separated by 18 nucleotides
CA264_16135: CA264_16135 - transporter, at 3,756,124 to 3,757,470
_16135
CA264_16140: CA264_16140 - efflux transporter periplasmic adaptor subunit, at 3,757,502 to 3,758,653
_16140
CA264_16145: CA264_16145 - copper transporter, at 3,758,672 to 3,762,079
_16145
Position (kb)
3757
3758
3759 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 3756.592 kb on + strand, within CA264_16135 at 3756.595 kb on + strand, within CA264_16135 at 3756.595 kb on + strand, within CA264_16135 at 3756.595 kb on + strand, within CA264_16135 at 3756.596 kb on - strand, within CA264_16135 at 3756.905 kb on - strand, within CA264_16135 at 3756.922 kb on + strand, within CA264_16135 at 3756.986 kb on - strand, within CA264_16135 at 3757.015 kb on + strand, within CA264_16135 at 3757.021 kb on + strand, within CA264_16135 at 3757.045 kb on - strand, within CA264_16135 at 3757.045 kb on - strand, within CA264_16135 at 3757.045 kb on - strand, within CA264_16135 at 3757.070 kb on - strand, within CA264_16135 at 3757.084 kb on + strand, within CA264_16135 at 3757.085 kb on - strand, within CA264_16135 at 3757.136 kb on - strand, within CA264_16135 at 3757.158 kb on - strand, within CA264_16135 at 3757.203 kb on + strand, within CA264_16135 at 3757.335 kb on - strand, within CA264_16135 at 3757.397 kb on - strand at 3757.407 kb on - strand at 3757.408 kb on + strand at 3757.409 kb on - strand at 3757.430 kb on + strand at 3757.430 kb on + strand at 3757.514 kb on - strand at 3757.515 kb on + strand at 3757.597 kb on - strand at 3757.746 kb on + strand, within CA264_16140 at 3757.822 kb on - strand, within CA264_16140 at 3757.894 kb on - strand, within CA264_16140 at 3757.953 kb on + strand, within CA264_16140 at 3757.986 kb on - strand, within CA264_16140 at 3758.066 kb on - strand, within CA264_16140 at 3758.097 kb on + strand, within CA264_16140 at 3758.098 kb on - strand, within CA264_16140 at 3758.315 kb on - strand, within CA264_16140 at 3758.416 kb on - strand, within CA264_16140 at 3758.456 kb on + strand, within CA264_16140 at 3758.456 kb on + strand, within CA264_16140 at 3758.457 kb on - strand, within CA264_16140 at 3758.462 kb on + strand, within CA264_16140 at 3758.493 kb on + strand, within CA264_16140 at 3758.493 kb on + strand, within CA264_16140 at 3758.494 kb on - strand, within CA264_16140 at 3758.494 kb on - strand, within CA264_16140 at 3758.494 kb on - strand, within CA264_16140 at 3758.652 kb on - strand at 3758.711 kb on - strand at 3758.719 kb on + strand at 3758.719 kb on + strand at 3758.720 kb on - strand at 3758.720 kb on - strand at 3758.723 kb on + strand at 3758.737 kb on - strand at 3758.737 kb on - strand at 3758.740 kb on + strand at 3758.765 kb on + strand at 3758.768 kb on - strand at 3758.893 kb on - strand at 3759.101 kb on + strand, within CA264_16145 at 3759.101 kb on + strand, within CA264_16145 at 3759.102 kb on - strand, within CA264_16145 at 3759.102 kb on - strand, within CA264_16145 at 3759.139 kb on - strand, within CA264_16145 at 3759.139 kb on - strand, within CA264_16145 at 3759.198 kb on + strand, within CA264_16145 at 3759.284 kb on - strand, within CA264_16145 at 3759.295 kb on + strand, within CA264_16145 at 3759.333 kb on + strand, within CA264_16145 at 3759.333 kb on + strand, within CA264_16145 at 3759.488 kb on + strand, within CA264_16145 at 3759.489 kb on - strand, within CA264_16145 at 3759.514 kb on + strand, within CA264_16145
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 7.5 vol% remove 3,756,592 + CA264_16135 0.35 +0.9 3,756,595 + CA264_16135 0.35 +2.3 3,756,595 + CA264_16135 0.35 -0.6 3,756,595 + CA264_16135 0.35 +1.4 3,756,596 - CA264_16135 0.35 +0.9 3,756,905 - CA264_16135 0.58 +0.1 3,756,922 + CA264_16135 0.59 -1.0 3,756,986 - CA264_16135 0.64 +0.5 3,757,015 + CA264_16135 0.66 +1.3 3,757,021 + CA264_16135 0.67 +0.8 3,757,045 - CA264_16135 0.68 +3.2 3,757,045 - CA264_16135 0.68 +0.3 3,757,045 - CA264_16135 0.68 +0.3 3,757,070 - CA264_16135 0.70 +0.1 3,757,084 + CA264_16135 0.71 -0.2 3,757,085 - CA264_16135 0.71 -0.3 3,757,136 - CA264_16135 0.75 -1.0 3,757,158 - CA264_16135 0.77 +0.5 3,757,203 + CA264_16135 0.80 +0.0 3,757,335 - CA264_16135 0.90 -0.1 3,757,397 - -2.6 3,757,407 - -1.1 3,757,408 + +0.4 3,757,409 - -0.7 3,757,430 + +1.8 3,757,430 + +0.8 3,757,514 - +0.1 3,757,515 + +1.3 3,757,597 - -0.8 3,757,746 + CA264_16140 0.21 +0.2 3,757,822 - CA264_16140 0.28 +1.1 3,757,894 - CA264_16140 0.34 +2.3 3,757,953 + CA264_16140 0.39 -0.7 3,757,986 - CA264_16140 0.42 +0.8 3,758,066 - CA264_16140 0.49 +0.9 3,758,097 + CA264_16140 0.52 -1.0 3,758,098 - CA264_16140 0.52 +1.0 3,758,315 - CA264_16140 0.71 -1.6 3,758,416 - CA264_16140 0.79 -0.1 3,758,456 + CA264_16140 0.83 -0.3 3,758,456 + CA264_16140 0.83 +0.2 3,758,457 - CA264_16140 0.83 +0.9 3,758,462 + CA264_16140 0.83 +1.0 3,758,493 + CA264_16140 0.86 +0.4 3,758,493 + CA264_16140 0.86 -0.3 3,758,494 - CA264_16140 0.86 +0.6 3,758,494 - CA264_16140 0.86 +3.3 3,758,494 - CA264_16140 0.86 -0.3 3,758,652 - -0.2 3,758,711 - +1.2 3,758,719 + +0.3 3,758,719 + -1.1 3,758,720 - -1.5 3,758,720 - +0.2 3,758,723 + +3.3 3,758,737 - -0.7 3,758,737 - +0.1 3,758,740 + +0.9 3,758,765 + -1.5 3,758,768 - -0.1 3,758,893 - -1.2 3,759,101 + CA264_16145 0.13 +0.0 3,759,101 + CA264_16145 0.13 -0.8 3,759,102 - CA264_16145 0.13 -0.4 3,759,102 - CA264_16145 0.13 +0.2 3,759,139 - CA264_16145 0.14 +0.0 3,759,139 - CA264_16145 0.14 -1.0 3,759,198 + CA264_16145 0.15 -0.1 3,759,284 - CA264_16145 0.18 +0.8 3,759,295 + CA264_16145 0.18 -0.5 3,759,333 + CA264_16145 0.19 -1.0 3,759,333 + CA264_16145 0.19 +2.2 3,759,488 + CA264_16145 0.24 +0.6 3,759,489 - CA264_16145 0.24 -0.5 3,759,514 + CA264_16145 0.25 +0.3
Or see this region's nucleotide sequence