Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_15805

Experiment: m.b. Dimethyl Sulfoxide 7.5 vol%

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_15795 and CA264_15800 are separated by 259 nucleotidesCA264_15800 and CA264_15805 are separated by 139 nucleotidesCA264_15805 and CA264_15810 are separated by 38 nucleotidesCA264_15810 and CA264_15815 are separated by 7 nucleotides CA264_15795: CA264_15795 - hypothetical protein, at 3,685,942 to 3,686,757 _15795 CA264_15800: CA264_15800 - hypothetical protein, at 3,687,017 to 3,687,549 _15800 CA264_15805: CA264_15805 - hypothetical protein, at 3,687,689 to 3,687,928 _15805 CA264_15810: CA264_15810 - hypothetical protein, at 3,687,967 to 3,688,353 _15810 CA264_15815: CA264_15815 - hypothetical protein, at 3,688,361 to 3,688,936 _15815 Position (kb) 3687 3688Strain fitness (log2 ratio) -2 -1 0 1 2at 3686.689 kb on + strandat 3686.815 kb on + strandat 3686.836 kb on + strandat 3686.836 kb on + strandat 3686.878 kb on + strandat 3686.899 kb on + strandat 3686.899 kb on + strandat 3686.900 kb on - strandat 3686.927 kb on + strandat 3686.928 kb on - strandat 3687.014 kb on + strandat 3687.014 kb on + strandat 3687.014 kb on + strandat 3687.014 kb on + strandat 3687.014 kb on + strandat 3687.014 kb on + strandat 3687.014 kb on + strandat 3687.015 kb on - strandat 3687.015 kb on - strandat 3687.015 kb on - strandat 3687.019 kb on - strandat 3687.066 kb on + strandat 3687.144 kb on - strand, within CA264_15800at 3687.184 kb on - strand, within CA264_15800at 3687.184 kb on - strand, within CA264_15800at 3687.225 kb on - strand, within CA264_15800at 3687.230 kb on - strand, within CA264_15800at 3687.284 kb on - strand, within CA264_15800at 3687.285 kb on + strand, within CA264_15800at 3687.314 kb on + strand, within CA264_15800at 3687.325 kb on - strand, within CA264_15800at 3687.346 kb on + strand, within CA264_15800at 3687.351 kb on + strand, within CA264_15800at 3687.356 kb on + strand, within CA264_15800at 3687.356 kb on + strand, within CA264_15800at 3687.357 kb on - strand, within CA264_15800at 3687.362 kb on + strand, within CA264_15800at 3687.400 kb on - strand, within CA264_15800at 3687.459 kb on + strand, within CA264_15800at 3687.554 kb on + strandat 3687.557 kb on + strandat 3687.560 kb on - strandat 3687.560 kb on - strandat 3687.567 kb on + strandat 3687.568 kb on - strandat 3687.589 kb on - strandat 3687.604 kb on - strandat 3687.770 kb on + strand, within CA264_15805at 3687.771 kb on - strand, within CA264_15805at 3687.833 kb on + strand, within CA264_15805at 3687.833 kb on + strand, within CA264_15805at 3687.834 kb on - strand, within CA264_15805at 3687.900 kb on + strand, within CA264_15805at 3687.901 kb on - strand, within CA264_15805at 3687.901 kb on - strand, within CA264_15805at 3687.942 kb on - strandat 3688.008 kb on + strand, within CA264_15810at 3688.024 kb on + strand, within CA264_15810at 3688.062 kb on + strand, within CA264_15810at 3688.064 kb on + strand, within CA264_15810at 3688.090 kb on + strand, within CA264_15810at 3688.090 kb on + strand, within CA264_15810at 3688.171 kb on + strand, within CA264_15810at 3688.171 kb on + strand, within CA264_15810at 3688.180 kb on + strand, within CA264_15810at 3688.203 kb on + strand, within CA264_15810at 3688.276 kb on - strand, within CA264_15810at 3688.299 kb on + strand, within CA264_15810at 3688.359 kb on - strandat 3688.402 kb on + strandat 3688.402 kb on + strandat 3688.409 kb on + strandat 3688.441 kb on + strand, within CA264_15815at 3688.442 kb on - strand, within CA264_15815at 3688.446 kb on - strand, within CA264_15815at 3688.457 kb on - strand, within CA264_15815at 3688.457 kb on - strand, within CA264_15815at 3688.466 kb on - strand, within CA264_15815at 3688.481 kb on - strand, within CA264_15815at 3688.499 kb on + strand, within CA264_15815at 3688.499 kb on + strand, within CA264_15815at 3688.510 kb on + strand, within CA264_15815at 3688.561 kb on - strand, within CA264_15815at 3688.655 kb on + strand, within CA264_15815at 3688.656 kb on - strand, within CA264_15815at 3688.674 kb on - strand, within CA264_15815at 3688.690 kb on + strand, within CA264_15815at 3688.690 kb on + strand, within CA264_15815at 3688.690 kb on + strand, within CA264_15815at 3688.690 kb on + strand, within CA264_15815at 3688.691 kb on - strand, within CA264_15815at 3688.773 kb on + strand, within CA264_15815at 3688.774 kb on - strand, within CA264_15815at 3688.774 kb on - strand, within CA264_15815at 3688.774 kb on - strand, within CA264_15815at 3688.803 kb on + strand, within CA264_15815at 3688.803 kb on + strand, within CA264_15815at 3688.803 kb on + strand, within CA264_15815at 3688.804 kb on - strand, within CA264_15815at 3688.829 kb on + strand, within CA264_15815at 3688.835 kb on + strand, within CA264_15815at 3688.836 kb on - strand, within CA264_15815at 3688.883 kb on - strandat 3688.900 kb on - strandat 3688.914 kb on - strandat 3688.916 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 7.5 vol%
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3,686,689 + -0.3
3,686,815 + -1.3
3,686,836 + -0.0
3,686,836 + +1.0
3,686,878 + +0.2
3,686,899 + -0.4
3,686,899 + +0.3
3,686,900 - -0.1
3,686,927 + -0.7
3,686,928 - +0.6
3,687,014 + +0.3
3,687,014 + -0.7
3,687,014 + +0.3
3,687,014 + -0.3
3,687,014 + -1.4
3,687,014 + -2.1
3,687,014 + -2.1
3,687,015 - -0.0
3,687,015 - +0.2
3,687,015 - -2.3
3,687,019 - -0.5
3,687,066 + +0.1
3,687,144 - CA264_15800 0.24 +0.2
3,687,184 - CA264_15800 0.31 -0.8
3,687,184 - CA264_15800 0.31 -0.2
3,687,225 - CA264_15800 0.39 +0.2
3,687,230 - CA264_15800 0.40 +1.0
3,687,284 - CA264_15800 0.50 +1.2
3,687,285 + CA264_15800 0.50 -0.7
3,687,314 + CA264_15800 0.56 +0.6
3,687,325 - CA264_15800 0.58 -0.8
3,687,346 + CA264_15800 0.62 +0.6
3,687,351 + CA264_15800 0.63 -0.4
3,687,356 + CA264_15800 0.64 +0.3
3,687,356 + CA264_15800 0.64 -1.6
3,687,357 - CA264_15800 0.64 +0.2
3,687,362 + CA264_15800 0.65 +0.0
3,687,400 - CA264_15800 0.72 +0.3
3,687,459 + CA264_15800 0.83 -1.9
3,687,554 + +1.3
3,687,557 + +0.2
3,687,560 - +0.3
3,687,560 - +0.4
3,687,567 + -1.2
3,687,568 - -1.1
3,687,589 - -0.3
3,687,604 - +1.4
3,687,770 + CA264_15805 0.34 -0.7
3,687,771 - CA264_15805 0.34 -0.6
3,687,833 + CA264_15805 0.60 -1.1
3,687,833 + CA264_15805 0.60 -0.4
3,687,834 - CA264_15805 0.60 -1.5
3,687,900 + CA264_15805 0.88 -0.8
3,687,901 - CA264_15805 0.88 -1.0
3,687,901 - CA264_15805 0.88 +0.2
3,687,942 - -0.6
3,688,008 + CA264_15810 0.11 -0.4
3,688,024 + CA264_15810 0.15 +0.0
3,688,062 + CA264_15810 0.25 -0.7
3,688,064 + CA264_15810 0.25 -1.0
3,688,090 + CA264_15810 0.32 -1.0
3,688,090 + CA264_15810 0.32 -0.2
3,688,171 + CA264_15810 0.53 -0.2
3,688,171 + CA264_15810 0.53 -1.5
3,688,180 + CA264_15810 0.55 -1.7
3,688,203 + CA264_15810 0.61 +0.1
3,688,276 - CA264_15810 0.80 +1.5
3,688,299 + CA264_15810 0.86 +1.8
3,688,359 - -1.1
3,688,402 + -0.3
3,688,402 + -0.3
3,688,409 + +0.4
3,688,441 + CA264_15815 0.14 -0.5
3,688,442 - CA264_15815 0.14 -1.1
3,688,446 - CA264_15815 0.15 -1.3
3,688,457 - CA264_15815 0.17 -0.2
3,688,457 - CA264_15815 0.17 -1.0
3,688,466 - CA264_15815 0.18 -0.8
3,688,481 - CA264_15815 0.21 -0.7
3,688,499 + CA264_15815 0.24 -0.0
3,688,499 + CA264_15815 0.24 +0.4
3,688,510 + CA264_15815 0.26 -0.3
3,688,561 - CA264_15815 0.35 -0.3
3,688,655 + CA264_15815 0.51 -0.8
3,688,656 - CA264_15815 0.51 -1.9
3,688,674 - CA264_15815 0.54 -1.4
3,688,690 + CA264_15815 0.57 -0.3
3,688,690 + CA264_15815 0.57 -1.9
3,688,690 + CA264_15815 0.57 -1.0
3,688,690 + CA264_15815 0.57 -0.3
3,688,691 - CA264_15815 0.57 -1.8
3,688,773 + CA264_15815 0.72 -0.3
3,688,774 - CA264_15815 0.72 -2.2
3,688,774 - CA264_15815 0.72 +0.4
3,688,774 - CA264_15815 0.72 -0.8
3,688,803 + CA264_15815 0.77 -0.9
3,688,803 + CA264_15815 0.77 +0.1
3,688,803 + CA264_15815 0.77 +1.9
3,688,804 - CA264_15815 0.77 -1.2
3,688,829 + CA264_15815 0.81 +1.3
3,688,835 + CA264_15815 0.82 -0.3
3,688,836 - CA264_15815 0.82 +0.3
3,688,883 - -1.0
3,688,900 - -0.6
3,688,914 - -0.7
3,688,916 - -0.1

Or see this region's nucleotide sequence